| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,464,207 | T→G | 11.9% | Q473P (CAG→CCG) | algX ← | alginate biosynthesis protein AlgX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,464,207 | 0 | T | G | 11.9% | 358.9 / 9.3 | 166 | Q473P (CAG→CCG) | algX | alginate biosynthesis protein AlgX |
| Reads supporting (aligned to +/- strand): ref base T (74/55); new base G (2/21); total (82/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.74e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 171 total aligned reads displayed.
TTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTG > NC_002947/1464058‑1464356 | ttGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCt > 2:1903009/1‑150 (MQ=255) gAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTgc > 1:1360342/1‑150 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGTGCGGTCTGCGCa < 1:3129185/150‑1 (MQ=255) cTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCa > 1:3704092/1‑150 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAg < 1:1194633/150‑1 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAg > 1:28857/1‑150 (MQ=255) ttttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAg < 1:2440636/150‑1 (MQ=255) tttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAgg > 2:1632410/1‑150 (MQ=255) ttCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGc > 1:3494000/1‑150 (MQ=255) tCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCa < 1:3615222/150‑1 (MQ=255) cGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCag < 2:3958398/150‑2 (MQ=255) cGAGCCCCTGGGAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCag < 1:3253246/150‑2 (MQ=255) gATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACg > 2:4512365/1‑150 (MQ=255) aTCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACACGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAATGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACgg < 2:2203089/150‑1 (MQ=255) aTCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACgg > 2:3198123/1‑150 (MQ=255) aTCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACgg > 2:3387337/1‑150 (MQ=255) tCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACCAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCaggcc < 2:4273746/150‑5 (MQ=255) tCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGc > 1:2282346/1‑150 (MQ=255) tCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCAGACCGCGCAGGCaggcc < 2:377768/150‑5 (MQ=255) tCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCGGCGCGGTCTGCGCAGGCACGGc > 1:1608796/1‑150 (MQ=255) cccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGa > 2:256236/1‑150 (MQ=255) cccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATGCGTTGGAAATGGGTGATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCGGCGCAGGCACGGCgc > 2:2822098/1‑149 (MQ=255) ccTGTTAGTAAACCTGCGGCGGTACCATCTCGGCGTGCGCGTCAACACCAAAAAATTCAAAC‑GCGATCAGGGAGGTGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGACTCACTGGCCTGCATGAGCGGTCTGCTCAGTCACGGCGaa > 2:772830/1‑150 (MQ=255) ccTGGTAGTACCCCTGGGGCGGTACCAGCGCGGGGTGCGCGGCCCCACCAAACACGGCCACC‑GCGAGCAGGGGGGGGCTGTAATTTGGTTTGAAACGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGGGGTCTGCGCAGGCACGGCGaa < 2:2787562/150‑1 (MQ=255) ccTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGaa > 2:1871423/1‑150 (MQ=255) gttattaACCCTGCGGCGGTACCAGCGCGGCGTGCGCGCCACCACCAAACACGGCCACC‑GCGAGCGGGGGGGGGCTGGAAATTCTTTTTAAACGGGTCTTGGGTCGCCTCACTGGCCGGCCTGCGCGGTCTGCGCAGGCACGGCGAAgtt < 2:1774963/145‑1 (MQ=255) agtaACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAACCACGGCCAAC‑GCGAGCTGGGCGGGGCTGTAAATTCGTTTGAAAAGGGTCTTGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAgttgtt < 2:3343073/150‑1 (MQ=255) agtaACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACACGGCCAAC‑GCGAGCCGGGCGGGGCTGGAAATTCTTTTTAAACGGGTAATGGGTCGCCTCACTGGCCTGCCTGCGCGTTCTGCGCAGGCACGGCGAAgttgtt < 2:4431315/150‑1 (MQ=255) aCCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGt > 2:2797205/1‑150 (MQ=255) cTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTGGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTg > 1:2332733/1‑150 (MQ=255) gcggcgGTACCAGCGGGGCGTGCGGGGCACCACCAAACACGGCCACC‑GCGAGCAGGGTGGGGGTGTAAATTGTTTTGAAATGGTTCATGGGTCGCCTCACTGGCCTGCCTGGGGGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCa < 2:2651832/150‑1 (MQ=255) gcggcgGAACCAGCGCGGCGTGCCCGCCACAACAAAACACCCCAAAC‑CCCAGCAGGGCGGGGATGAAAATTCTTTTAAAAAGGCTCATGGGACCCAAAACTGCCCCGCCTGCGCGCTCTCCCAAGCCACGGCGAAGTTGTTGCGTTTGCa < 2:905644/150‑1 (MQ=255) gTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCtt > 2:2322716/1‑150 (MQ=255) cAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCt > 1:788308/1‑150 (MQ=255) cgcgGCGTGCGCGGCACCACCAAACACGCCCAAC‑GCGAGCTGGGGGGGGGTGGAAATTCGTTTGAACTGGGTATGGGGGCGCCTCACGGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCg < 1:3731448/150‑1 (MQ=255) gcggcgTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGa > 2:663048/1‑150 (MQ=255) cgTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCtt > 2:374360/1‑150 (MQ=255) gTGCGCGCCACCACCACACAAGGCCACC‑GCGAGCCGGGGGGGGGTGGAATTTCGTTTTAAATGGTTCTTGGGTCGCCCCACGGGCCTGCCTGCGCGGCCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTc < 2:3492221/150‑1 (MQ=255) tGCGCGGCCCCACCAAACACGGCCACC‑GCGAGCCGGGGGGGGCTGTAATTTCTTTTGAAACGGGTCTTGGGTCGCCTCACGGGCCGGCCTGCGCGGTGTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCt < 2:1501144/150‑1 (MQ=255) tGCGCGGCACCACCAAACACGGCAAAC‑GCGAGCAGGGCGGGGCTGTAAATTCTTTTGAACAGGGTCATGGGTCGCCTCACTGGCCGGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCt < 2:3695201/150‑1 (MQ=255) ggcgcgcCCCCACAAAACACGCCCACC‑GCGAGCCGGGGGGGGGTGTAAATTCGTTTCAAACGGGTCTGGGGTCGCCCCACGGGCCGGCGGGCGGGGACGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCt < 2:1501075/149‑1 (MQ=255) gcgcGGCACCACCAAACAAGGCAAAC‑GCGTGCCGGGGGGGGCTGTAATTTCTTTTTAAAAGGGTCTTGGGTCGCCTCACTGGCCGGCCTGGGGGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTg < 2:497539/150‑1 (MQ=255) gcgGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGGCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTggg > 1:50820/1‑150 (MQ=255) caccacCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGGGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGcc > 1:531921/1‑150 (MQ=255) caccaAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCt > 2:1765870/1‑150 (MQ=255) accaAACCCGCCCACC‑GCGAGCCGGGGGGGGCTGGAATTTGGTTTTAAACGGGTCATGGGGCGCCCCACGGGCCGGCCGGCGCGGTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCtt < 2:2442659/150‑1 (MQ=255) ccaAACACGCCCACG‑GCGCGCGGGGGGGGGGTGCAATTTCTTTTTAAATGGGAGTTGGGTCGCCACCCGGCCGTGCCTGGGGGGTCGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCttt < 1:4190996/150‑1 (MQ=255) ccaAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCGTCGACCGTCTGGGTGCCGCttt > 1:746183/1‑150 (MQ=255) aaaCAAGCCAAAC‑GCGAGCCGGGCGGGGCTGTAAATTCTTTTTAAAAGGGTAATGGGTCGCCTCACTGGCCTGCCTGCGCTTTCTGCTCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTcc < 1:674170/150‑1 (MQ=255) cggCCACG‑GCGAGCTGGGGGGGGGTGTAATTTGTTTTTAAATGGGTCTTGGGTCGCCTCAGGGGCCTGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc < 1:2553448/149‑1 (MQ=255) cggCCACC‑GCGCGCCGGGGGGGGGTGTAATTTCTTTTGAAACGGGCCCTGGGTCGCCTCACGGGCGGGCCTGCGGGGGGGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc < 1:2162560/149‑1 (MQ=255) cggCCACC‑GCGAGCTGGGGGGGGCTGTAATTTGTTTTTAACTGGGTATTGGGTCGCCTCAGTGGCCTGCCTGGGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc < 2:4287782/149‑1 (MQ=255) ggCCACC‑GCGCGCCGGGGGGGGCTGTATATTCGTTTTAACTGGGTCCTGGGGCGCCTCCCGGGCCGGCGTGCGGGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGcccc < 2:1224450/150‑1 (MQ=255) cgCCAACGGCGCGCCGGGGGGGGCTGTATATTTTTTTTAATTGGTTCTGGGGTCGCCAAAGTGGCCTGGCGGGGGGGTGTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccc < 1:2050853/149‑1 (MQ=255) c‑gcgAGCTGGGGGGGGCTGGAAATTCGTTTGAAATGGGTCTTGGGTCGCCCCACTGGCCGGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGccccagaagg < 2:3836391/150‑7 (MQ=255) cgcgcgggggggggTTGTAATTTGTTTTCAAATGGGTCTTGGGTCGCCTCAGTGGCCTGCCTGGGGGGTCTGCGCTGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 1:3241886/144‑1 (MQ=255) cgcgccgggcggggcgGTAAATTCGTTTGAAAAGGGTCTGGGGTCGCCTCACTGGCCGGCCGGCGCGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 2:2389016/144‑1 (MQ=255) cgAGCAGGGCGGGGCTGGAAATTCGTTTGAAACGGGTCTTGGGTCGCCTCACTGGCCGGCCTGCGCGTTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTc < 2:2195428/150‑1 (MQ=255) gccggggggggCTGCAATTTCTTTTGAAATGGGTCTTGGGTCGCCTCACTGGCCGGCGGGGGGGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGaa < 2:2413359/147‑1 (MQ=255) ggggggggTTGTAATTTCGTTTGAAAGGGGTCTTGGGCCGCCCCCCGGCCGGGCCTGGGGGGTCGGCGCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAAcgc < 1:264750/150‑1 (MQ=255) ggggggTTGGAAATTCTTTTGAAATGGTTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 2:1845893/148‑1 (MQ=255) ggggggGTGTAATTTCGTTTGAAAGGGGTCTGGGGGGGCCGCTGGGGCGGGCGGGGGGGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 1:4307726/148‑1 (MQ=255) ggggggGTGGATATTCGTTTTAAAAGGGTCTTGGGTCGCCTCCCTGGCCTGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 2:1977590/148‑1 (MQ=255) ggggggCTGTAATTTGGTTTGAAACGGGCCATGGGCCGCCCCCCGGGCCGGCGTGCGCGGTCGCCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGa < 2:116532/148‑1 (MQ=255) ggggCTGCAATTTTTTTTTAAATGGGCCTGGGGCCGCCCCCCGGGCCGGCGGGGGCGGGCGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGc < 1:1235621/150‑1 (MQ=255) cTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAACTTGTTGCGTTTGCAGAGCTTTGCTTAGACCATCATGGTGCCGCATTACGGCCCCAGTACCTACAACCCGAGCAGgc > 1:1919273/1‑150 (MQ=255) ttaatttCGTTTGAAACGGGACATGGGTCGCCTACCTGGCCTGCCTGCGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGgcgc < 2:2279695/145‑1 (MQ=255) gAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgct > 2:3135051/1‑150 (MQ=255) aaTTCTTTTGAAACGGGTCATGGGCCGCCTCACGGGCCTGCCGGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctgg < 2:3085600/150‑1 (MQ=255) ttCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCgctggct > 2:3288324/1‑150 (MQ=255) gttttCAAACGGGTCTGGGGCCGCCTCCGGGGCCGGCGGGCGGGGTGGGCGCCGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGctggctgg < 1:38743/148‑1 (MQ=255) cGTTTGAAACGGGTCATGGGGCGCCTCCCGGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGctggctgg < 2:662068/150‑1 (MQ=255) gTTTGAAACGGGACTGGGGTCGCCTCCCGGGCCGGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTGGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAATGCGAGCAGGCGCtggctggc < 2:2509690/150‑1 (MQ=255) tttGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGcc > 2:4055926/1‑150 (MQ=255) tttGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACCGCGAAGTTGTTTCGTTTGCAGAGCTTGGCTTCGACCATCTGGGTGCCGCTTTACGGCCCCAGTAACACGAACGCGAGCAGGCGCAGGCTGGcc > 1:1919542/1‑150 (MQ=255) tGAAACGGGTCTTGGGTCGCCCCCCGGGCCTGCCTGCGGGGGCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCa < 1:2713457/150‑1 (MQ=255) tGAAAAGGGTCTGGGGTCGCCCCACTGGCCGGCGTGCGCGGTCTGCGCAGCCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCa < 2:2282346/150‑1 (MQ=255) aaaaGGGTCATGGGTCGCCTCACTGGCCTGCCTTCGCGGTCAGCGCACGCACCGCGAAGTTGTTTCGTTTGCAGAGATTGGCTTAGACCTTCTGGGTGCCGCTTTACGGCCCCAGTACCACGAAAGCGAGCACGCGCAGGCTGGCCCAGt > 1:2367961/1‑150 (MQ=255) ggggctggggTCGCCTCACGGGCCTGGGGGGGCGGTCGGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTc < 1:3462516/143‑1 (MQ=255) gggTCTTGGGGCGCCTCACTGGCCTGCCTGCGCGGCCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTc < 2:1195529/150‑1 (MQ=255) gTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGt > 1:1017259/1‑150 (MQ=255) gTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGt > 1:1017238/1‑150 (MQ=255) ggggTCGCCTCCCGGGCCTGCCTGCGCGGTCGGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCGTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTc < 2:2101685/149‑1 (MQ=255) ggTCGCCTCACTGGCCTGCCGGCGCGGACTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTcgc < 2:4237929/150‑1 (MQ=255) tCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCgcgc > 2:2752921/1‑150 (MQ=255) agtGGCCTGCCTGCGCGGTCTGCGCTGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGa < 2:4358627/148‑1 (MQ=255) tGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAg > 2:4021672/1‑150 (MQ=255) gccgtgcctgcGCAGACCGCGCAGGCA‑GGCGAAGTTGTTGCGTTTGCAGAGCGTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCAGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCACCGCTTCGCGCATATGGAAGAc > 2:3318436/5‑150 (MQ=255) gtgcctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGa > 2:1022122/2‑150 (MQ=255) cctgcGCAGACCGCGCAGGCAGGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGc > 2:3024454/1‑150 (MQ=255) cctgcGCAGACCGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAg < 1:3083619/143‑1 (MQ=255) ctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCg < 2:3617861/150‑1 (MQ=255) ctgcGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCg > 2:1358522/1‑150 (MQ=255) ggTCTGCGCCGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTc < 2:1663431/150‑1 (MQ=255) ggTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTc < 1:2781197/150‑1 (MQ=255) cccTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCg > 2:3543281/3‑150 (MQ=255) tCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCgg > 1:2452242/1‑150 (MQ=255) cTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGgt > 1:4281108/1‑150 (MQ=255) cTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGgt > 1:4281317/1‑150 (MQ=255) tGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGgtg > 2:2016288/1‑150 (MQ=255) | TTGAGCTTTTCGATCCCCTGGTAGTAACCCTGCGGCGGTACCAGCGCGGCGTGCGCGGCACCACCAAACAAGGCCAAC‑GCGAGCAGGGCGGGGCTGGAAATTCGTTTGAAAAGGGTCATGGGTCGCCTCACTGGCCTGCCTGCGCGGTCTGCGCAGGCACGGCGAAGTTGTTGCGTTTGCAGAGCTTGGCTTCGACCTTCTGGGTGCCGCTTTCCGGCCCCTGTACCTCGAACGCGAGCAGGCGCTGGCTGGCCCAGTCCTCGTCTTCGCGCATCTGGAAGACGAAGCGGCCGTCGGTG > NC_002947/1464058‑1464356 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |