| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,633,969 | C→T | 5.1% | intergenic (+21/‑143) | lepB → / → rnc | signal peptidase I/ribonuclease 3 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,633,969 | 0 | C | T | 5.1% | 509.6 / 10.7 | 156 | intergenic (+21/‑143) | lepB/rnc | signal peptidase I/ribonuclease 3 |
| Reads supporting (aligned to +/- strand): ref base C (71/77); new base T (3/5); total (74/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 | |||||||||||
Only 100 of 172 total aligned reads displayed.
CCCAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTGGCCGCATGAGT > NC_002947/1633820‑1634117 | ccAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCcagca > 1:3804068/1‑150 (MQ=255) ccAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCcagca > 1:507990/1‑150 (MQ=255) ccAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCcagca > 2:2948516/1‑150 (MQ=255) cAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCcagcag > 1:447305/1‑150 (MQ=255) cAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCcagcag > 1:814489/1‑150 (MQ=255) cAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCcagcag > 2:2178599/1‑150 (MQ=255) cAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCcagcag > 2:2270780/1‑150 (MQ=255) aaGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGa > 2:4237468/1‑150 (MQ=255) cTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAgcgc < 1:3100205/150‑1 (MQ=255) tGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGAGCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGcc > 1:2024903/1‑150 (MQ=255) cACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCTGCTGGACAGCGCCGa < 1:1654502/150‑1 (MQ=255) cACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGa < 2:1446425/150‑1 (MQ=255) cACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGa < 1:538435/150‑1 (MQ=255) cACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGa < 2:744299/150‑1 (MQ=255) aCGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCTGCTGGACAGCGCCGat < 2:1013740/150‑2 (MQ=255) aCGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGaa < 2:3580475/150‑1 (MQ=255) ccgCATGGTTACCGAACCGAACAATGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCTGCTGGACAGCGCCGatg < 2:3544084/148‑3 (MQ=255) gacaatgTTCCGGTCCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATg > 2:3277009/7‑150 (MQ=255) aatgTTCCGGTCCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCAt > 2:513753/4‑150 (MQ=255) tGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCAtt > 1:4282061/1‑150 (MQ=255) ttCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCt < 2:2152944/150‑1 (MQ=255) ccggaccggaACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGa < 1:1639848/150‑1 (MQ=255) cggaccggaACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGAc < 1:1117295/150‑1 (MQ=255) ccggaACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAg > 2:916936/1‑150 (MQ=255) cggaACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAgg < 1:376906/150‑1 (MQ=255) cggaACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAgg < 2:4462895/150‑1 (MQ=255) gaACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCt > 1:105914/1‑150 (MQ=255) aCATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTGAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCtgt > 1:1641237/1‑150 (MQ=255) cATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCtgtg < 1:2712478/150‑1 (MQ=255) ttGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGtt > 1:253908/1‑150 (MQ=255) ttGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGtt < 1:2964630/150‑1 (MQ=255) cGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCa < 1:556340/150‑1 (MQ=255) gCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAgg < 2:4343441/150‑1 (MQ=255) gCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAgg > 1:2984670/1‑150 (MQ=255) gCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAgg > 2:2223165/1‑150 (MQ=255) gCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAgg < 2:1303477/150‑1 (MQ=255) aGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGAt < 2:1618861/150‑1 (MQ=255) ccTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGCTCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCgg < 2:2801063/150‑1 (MQ=255) ttCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATGGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGga < 1:4338432/150‑1 (MQ=255) gcgGTGTGGAGGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGACTGCATTGCTGACATAGTCTGTGTTCTCAGGGATCGGgagaa > 2:4490123/1‑149 (MQ=255) cgGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGAtt < 1:235450/150‑1 (MQ=255) tgGATGAGCTGGCCAGAGCCCAAACTCATCCACTTGCCCAACCTGTCGCGGTTTGGCCTTATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCca < 1:1183497/150‑1 (MQ=255) gATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGc > 1:671725/1‑146 (MQ=255) gATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGc < 2:671725/146‑1 (MQ=255) gATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGc > 1:671775/1‑146 (MQ=255) ggCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATGGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATc < 1:3226085/150‑1 (MQ=255) ggCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATc < 2:799390/150‑1 (MQ=255) agCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGa < 1:388223/150‑1 (MQ=255) ccAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACca > 1:1740495/1‑150 (MQ=255) cAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACcac > 2:3673024/1‑150 (MQ=255) cAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACcac > 2:1323182/1‑150 (MQ=255) aaaCTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACcaca > 1:2408533/1‑150 (MQ=255) aaCTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAg < 1:1469500/150‑1 (MQ=255) tCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCa > 2:3768542/1‑150 (MQ=255) tCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCa > 1:3220965/1‑150 (MQ=255) tCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCa > 1:3035611/1‑150 (MQ=255) cAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCaa < 1:760971/150‑1 (MQ=255) aGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCaaa > 1:694131/1‑150 (MQ=255) aGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCaaa > 1:3293210/1‑150 (MQ=255) aCTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGt > 2:3808121/1‑150 (MQ=255) ccAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCa < 1:403569/150‑1 (MQ=255) ccAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCa < 1:2073391/150‑1 (MQ=255) cAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCTGCTGGACAGCGCCGatgg < 1:550916/67‑4 (MQ=18) cAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCTGCTGGACAGCGCCGatgg > 2:550916/1‑64 (MQ=18) aaCCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAgg > 2:1829309/1‑150 (MQ=255) aaCCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAgg < 1:1931383/150‑1 (MQ=255) aaCCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAgg > 2:853264/1‑150 (MQ=255) cTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATg > 1:109791/1‑150 (MQ=255) gTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGtt < 2:4302993/150‑1 (MQ=255) cgcgGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGa < 2:1940641/150‑1 (MQ=255) gcgGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGAt > 1:375601/1‑150 (MQ=255) gcgGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGGTGAt > 1:3790039/1‑150 (MQ=255) gggTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGAttt < 1:2948516/150‑1 (MQ=255) gTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGa > 2:1594808/1‑150 (MQ=255) ttGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGaa < 2:2998779/150‑1 (MQ=255) ccTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGaacaac < 1:1585258/150‑1 (MQ=255) ccTGATCCATTGATACCCATCGGCACTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGaacaac > 1:3882131/1‑150 (MQ=255) cTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACCAcg > 1:279591/1‑150 (MQ=255) cATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGa < 1:2592979/150‑1 (MQ=255) cATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGa < 1:3794900/150‑1 (MQ=255) aTTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGaa > 1:266266/1‑150 (MQ=255) aTTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGaa > 1:2792549/1‑150 (MQ=255) ttGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGaac < 1:1271751/150‑1 (MQ=255) ccATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATc < 1:2313004/150‑1 (MQ=255) ccATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATc < 1:339670/150‑1 (MQ=255) ccATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATc > 2:227268/1‑150 (MQ=255) ccATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATc > 1:1801674/1‑150 (MQ=255) ccATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATc > 1:84199/1‑150 (MQ=255) cATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCg > 2:122375/1‑150 (MQ=255) cATAGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTATGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGTACAACGATCg > 2:3534870/1‑150 (MQ=255) aTCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCgg > 1:4233736/1‑150 (MQ=255) ggCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTg > 2:2954586/1‑150 (MQ=255) cgcTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTGGc > 2:335371/1‑150 (MQ=255) tGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTGGCCGc > 2:4096553/1‑150 (MQ=255) cagcagACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTGGCCGCATGa < 2:3944818/150‑1 (MQ=255) cagcagACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTGGCCGCATGa < 1:1912346/150‑1 (MQ=255) cagcagACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTGGCCGCATGa > 1:2222367/1‑150 (MQ=255) cagcagACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGAGTTGAACAACGCGTTGAACAACGATCGGGTGGCCGCATGa > 1:3352034/1‑150 (MQ=255) gcagACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTGGCCGCATGAGt < 2:814489/150‑1 (MQ=255) gcagACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTGGCCGCATGAGt < 1:2270780/150‑1 (MQ=255) | CCCAAGGAACTGCACGGCATGGTTCCGGACCGGAACATTGTCGGCAAGGCCTTCGCGGTGTGGATGAGCTGGCCAGAGCCCAAACTCAGCCACTTGCCCAACCTGTCGCGGGTTGGCCTGATCCATTGATACCCATCGGCGCTGTCCAGCAGACAGCGCCGAATGCATTTCTGACATAGGCTGTGTTCTCAGGGATCGGGAGATTCGCCACACATCAATCGGCGGACCACAGCCAAACAGTCTTTCAGGATGTTGATTTGAACAACGCGTTGAACAACGATCGGGTGGCCGCATGAGT > NC_002947/1633820‑1634117 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |