| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,644,878 | G→T | 9.8% | intergenic (‑95/+109) | lon‑I ← / ← gcd | DNA‑binding ATP‑dependent protease/quinoprotein glucose dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,644,878 | 0 | G | T | 9.8% | 373.9 / 25.7 | 123 | intergenic (‑95/+109) | lon‑I/gcd | DNA‑binding ATP‑dependent protease/quinoprotein glucose dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (52/59); new base T (7/5); total (59/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01 | |||||||||||
Only 100 of 139 total aligned reads displayed.
TTCGACTTCGCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTAATCGCCCATCT > NC_002947/1644730‑1645027 | ttCGACTTCGCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTgcgc > 1:366002/1‑150 (MQ=255) tCGAGTTCGCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCTTGGGGCACC‑TGCGTGAATGAATATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCgca < 2:3801299/150‑1 (MQ=255) gACTTCGCTGTTTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCTTGGGGCACC‑GGCGTTAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCgcagc < 2:168103/150‑1 (MQ=255) gACTTCGCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCCCC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGCGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCgcagc < 2:168107/150‑1 (MQ=255) gACTTCGCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCgcagc > 1:4229518/1‑150 (MQ=255) atttCGGTGTGTGCGTCTGGTTGTGGGGGTAATTCCTGGGGGTCGCTC‑TGGGGCACCGTGGGTTATTGACTTTGGTGTTTATATGGGGGGGGGTGGT‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCgcagca < 1:215669/148‑1 (MQ=255) aCTTCGCTGTGTTCGTCTGGGTGTTCGGGGAAATCCTGCTGGTCGCTCTTGGGGCACC‑TGGGTTAATGACTATGGTGCTTTTTTGGGGGGGGGTGGT‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCgcagca < 1:2253605/150‑1 (MQ=255) cGCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCACAGGGGGCACC‑GGCGGGAATGCCGAGGGTGCTAAGATGGGGGGGGGCGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGccc < 1:1542477/150‑1 (MQ=255) gCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGcccc > 2:313479/1‑150 (MQ=255) gCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGcccc > 2:282507/1‑150 (MQ=255) ctttgtTCGTCTGGGTGTTGGGGGAAAGCCTGGTGGTCGCTCTTGGGGCACG‑TGGGTGATTCAATAGGGTGCTTAGATGGGGGGGGGTGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCa < 2:1845438/147‑1 (MQ=37) tgtgTTCGTCTGGGTTTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCTTGAATGACTATGGTGCTTATATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCTGCGCAGcccaat < 2:2026760/150‑4 (MQ=255) tgtgTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAg > 2:2459293/1‑150 (MQ=255) gtgtTCGTCTGGGTGTTGGGGGAAATCGGGCGGGTCGCTCTTGGGGCACC‑TGGGTGAATTACTTTGGTGCTTTGATGGGGGGGGGCGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCTGCGCAGcccaatc < 1:2339100/150‑5 (MQ=255) gtgtTCGTCTGGGTGTCCGGGGAAATCCTGTGGGTCGCTCTTGGGGACCC‑GGCGTTAATGACTTTGGTGCTTAGATGGGGCGGGGTGGT‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCTGCGCAGcccaatc < 2:1858641/150‑5 (MQ=255) gtTCGTCCGGGTTTTCGGGGAAATCCTGCTGGTCGCTCTTGGGGCACC‑TGCGTGATTGACTTGGGTGCTTTGATGGGGCGGGGTGGT‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAat < 2:2382181/150‑1 (MQ=38) gtTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGGat > 1:1150131/1‑150 (MQ=255) gtTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAat > 1:2830389/1‑150 (MQ=255) ttCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCCATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAatc > 2:3780697/1‑150 (MQ=255) gTCTGGGTGTTGGGGTAAATCGTGCTGGTCGCTCAGGGGGCACG‑TGCTTTATTCACTTTGGTGTTTAGTGGGGGGGGGGTGGT‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAatccat < 1:148625/150‑1 (MQ=25) gTCAGGGTGTTCGGGGAATTCCTGCTGGTCGCTCATGGGGCACC‑TGCGTTAATGACTATGGTGCTTATATGGGGGGGGTTGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAatccat < 2:3398849/150‑1 (MQ=39) gTCAGGGTGTTCGGGGAATTCCTGCTGGTCGCTCAGGGGGAACC‑TGGGTGAATGACTATGGTGCTTATATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAatccat < 2:4379268/150‑1 (MQ=39) gTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAatccat > 1:3149287/1‑150 (MQ=255) tctgggTGTTCGGGGAAATCGTGCTGGTCGATCTTGGGGAACC‑TGCGTTTATTACTTTGGTGCTTATATGGGGGGGGGCGGT‑TTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAatccatc < 1:1186456/147‑1 (MQ=37) cAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCTTGAATGACTATGGTGCTTAGATGGGGGGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAatccatcc < 2:3138838/150‑1 (MQ=255) aGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAAtccatcca > 2:2970340/1‑150 (MQ=255) tCGGGGAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCt > 2:3941841/1‑150 (MQ=255) ggggAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAg > 1:9510/1‑150 (MQ=255) ggtaaaTCGTGGTGGTCGCTCTTGGGGCACC‑TGGGTTATTTACTTTGGTGTTTTGTTGGGGGGGGTTGGG‑TTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGa < 1:3467253/147‑1 (MQ=25) gggAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGa > 2:2459027/1‑150 (MQ=255) aTCCTGGTGTGCGCTCTTGGGGCACC‑GGCGTGAATGACTTTGGTGCTTAGTTGGGGGGGGGCGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGtt < 1:888598/150‑1 (MQ=38) tcgtggtgGTCGCTCTTGGGCCACG‑GGGGTTATTTACTTTGGTGCTTTTTTGGGGGGGGGTGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTg < 1:497968/144‑1 (MQ=25) tcgtgctgGTCGCTCTTGGGGCACG‑TGGGTGATTGACTTGGGGGCTTCG‑TGGGGGGGGGTGGGTATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTg < 1:497990/147‑1 (MQ=37) tCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTg < 2:2512248/150‑1 (MQ=255) ggggggTCGCTCTTGGGGCCCG‑TGCTTTTTTGAATTGGGTGCTTATAGGGGGGGGGGTGGT‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTgggg < 1:4065231/146‑1 (MQ=25) ggTCGCTCTTGGGGCACC‑TGCGTGAAGGACTAGGGTGCTTAGATGGGGCGGGGAGGG‑AGGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGc < 2:1049277/150‑1 (MQ=255) gTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCt > 1:1967542/1‑150 (MQ=255) gCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTACAATGGGTCGGGAGCAGCCTTGTGTCGCTATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTgcg > 2:3728999/1‑150 (MQ=255) tCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGcgcg > 1:2487136/1‑150 (MQ=255) tCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGcgcg > 2:1464456/1‑150 (MQ=255) cATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGa > 1:2978151/1‑150 (MQ=255) tgggggCACC‑TGCGTGATGTACTTGGGTGTTTATATGGGGGGGGGGGGG‑TTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGAc < 1:3792904/148‑1 (MQ=38) gggCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGAGTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGa > 2:4497538/1‑150 (MQ=255) gCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑AGGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGaaa > 1:1700541/1‑150 (MQ=255) cACG‑TGCGTGACTGACTTTGGTGCTTTGTTGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAAc < 2:2386697/150‑1 (MQ=39) tGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGa < 2:3556655/150‑1 (MQ=255) gACTAGGGTTGTTAGTTGGGGGGGGTTGGT‑TTGGG‑GTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCATCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGcc < 1:2478572/150‑1 (MQ=38) ggagCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGACCCAGAAACCAACCAGCAATCTAGATACTTGGGGCCGCTGCGCGACCGAAACGCCACACCAGGCCGCTccc > 2:1354813/4‑150 (MQ=255) ggTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTccc > 1:1072476/1‑150 (MQ=255) ggTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTccc > 1:3996412/1‑150 (MQ=255) cTTAGTTGGGGCGGGGTGGG‑TGGGG‑TTTCTATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCTTTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAg < 2:1280007/150‑1 (MQ=38) ttAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAgg > 2:1460392/1‑150 (MQ=255) aTGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTg > 2:3070568/1‑150 (MQ=255) cGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTg > 1:2824986/1‑150 (MQ=255) ggggTGGG‑TTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGc < 2:3207112/150‑1 (MQ=255) tggg‑ttggg‑ttTCATTGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCATAATCCATCCAGCATTCTTGTTCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGa < 1:2342575/149‑1 (MQ=39) tggtaTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGTTTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCTAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGa < 1:3619716/146‑1 (MQ=255) ggg‑ttgggttTTCACTGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCGCAGGCTCAACCCTGAGGGa < 1:1449163/150‑1 (MQ=37) gg‑aTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGc < 2:477188/150‑1 (MQ=255) g‑aTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCg > 1:206251/1‑150 (MQ=255) aTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCgg > 1:3506964/1‑150 (MQ=255) tGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGgt < 2:416602/150‑1 (MQ=255) tGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGgt < 2:863422/150‑1 (MQ=255) tGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGgt > 2:1384338/1‑150 (MQ=255) g‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACGCAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTc < 1:4171837/150‑1 (MQ=255) g‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTc > 1:3616790/1‑150 (MQ=255) g‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTc < 2:2799910/150‑1 (MQ=255) tttCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCg > 1:730657/1‑150 (MQ=255) ttCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCggccttgt < 2:4229518/150‑7 (MQ=255) tGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACt > 2:1633756/1‑150 (MQ=255) ttCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCgg < 2:3499470/150‑1 (MQ=255) ggAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTaa < 2:3522527/150‑1 (MQ=255) agcagcCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAAtt > 2:845374/1‑150 (MQ=255) gcagcCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAAttt < 2:4012729/150‑1 (MQ=255) agcCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGt < 1:1196799/150‑1 (MQ=255) agcCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGt < 1:1432818/150‑1 (MQ=255) agcCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGt < 1:1177539/150‑1 (MQ=255) ccTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTaa < 1:48879/150‑1 (MQ=255) ttGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAg > 2:1740600/1‑149 (MQ=255) ttGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAg < 1:1740600/149‑1 (MQ=255) gtCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAatg < 1:1464456/150‑1 (MQ=255) gtCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAatg < 2:1210331/150‑1 (MQ=255) tCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTTGGCTAATTTGTAAGCAatga < 2:1228700/150‑1 (MQ=255) tCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAatga < 1:2459027/150‑1 (MQ=255) tCGCGATGGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGCTCGTTGGGGCCGCTGCGCGACCGAACCGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAatga < 2:4328827/150‑1 (MQ=255) cgcgATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAatgat > 1:2467676/1‑150 (MQ=255) attctggggCTGCTGCGCAGCCCAAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAatgatg > 1:2730758/7‑150 (MQ=255) tctggggCTGCTGCGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTa > 1:1137990/5‑150 (MQ=255) tctggggCTGCTGCGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTa > 1:2471738/5‑150 (MQ=255) tctggggCTGCTGCGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTa > 1:2471840/5‑150 (MQ=255) tctggggCTGCTGCGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTa > 1:3448752/5‑150 (MQ=255) aTTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTaa > 2:3334327/1‑150 (MQ=255) aTTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTaa > 2:1956277/1‑150 (MQ=255) ggCTGCGCAGCAGCCCCATAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTAATCGc < 1:667949/150‑1 (MQ=255) gCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTAATCGcc > 2:2170340/1‑150 (MQ=255) cTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTAATCGccc > 1:2037022/1‑150 (MQ=255) cgcAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCgg < 2:410773/98‑1 (MQ=255) cgcAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCgg > 1:410593/1‑98 (MQ=255) cgcAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCgg > 1:410773/1‑98 (MQ=255) gcagcaGCCCCAGAATCCATCCAGCAGTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGCGCCTGCGGGAGCGGTGTCGCTTCCGCGGCTAATTTGTAAGCAATGAGGTAATCGCCCATcg > 2:4153714/1‑149 (MQ=255) | TTCGACTTCGCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACC‑TGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTAATCGCCCATCT > NC_002947/1644730‑1645027 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |