| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,644,880 | A→C | 9.5% | intergenic (‑97/+107) | lon‑I ← / ← gcd | DNA‑binding ATP‑dependent protease/quinoprotein glucose dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,644,880 | 0 | A | C | 9.5% | 371.0 / 27.6 | 126 | intergenic (‑97/+107) | lon‑I/gcd | DNA‑binding ATP‑dependent protease/quinoprotein glucose dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (53/61); new base C (7/5); total (60/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.13e-01 | |||||||||||
Only 100 of 137 total aligned reads displayed.
TCGACTTCGCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTAATCGCCCATCTT > NC_002947/1644731‑1645028 | cGAGTTCGCTGTGTTCGTCCGGGTTTGCGGGTAAAACCTGCTGGTCGCTCTTGGGGAACCTGGTTTATTGACTTTGGTGCTTATATGGGGGGGGGAGGT‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCgcag < 1:2287672/150‑1 (MQ=255) gACTTCGCTGTTTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCTTGGGGCACCGGCGTTAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCgcagc < 2:168103/150‑1 (MQ=255) gACTTCGCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCCCCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGCGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCgcagc < 2:168107/150‑1 (MQ=255) gACTTCGCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCgcagc > 1:4229518/1‑150 (MQ=255) aCTTCGCTGTGTTCGTCTGGGTGTTCGGGGAAATCCTGCTGGTCGCTCTTGGGGCACCTGGGTTAATGACTATGGTGCTTTTTTGGGGGGGGGTGGT‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCgcagca < 1:2253605/150‑1 (MQ=255) ttCGCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCagcagc > 2:2492413/1‑150 (MQ=255) tCGCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGcc > 2:3831271/1‑150 (MQ=255) ccGCTGGTTTCGTCAGGGTGTTCGGGGAACTCCTGCTGGCCGCACATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGCGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATGGGGCTGCTGCGCAGcc < 2:3510515/149‑1 (MQ=255) cGCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCACAGGGGGCACCGGCGGGAATGCCGAGGGTGCTAAGATGGGGGGGGGCGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGccc < 1:1542477/150‑1 (MQ=255) gCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGcccc > 2:282507/1‑150 (MQ=255) gCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGcccc > 2:313479/1‑150 (MQ=255) ctttgtTCGTCTGGGTGTTGGGGGAAAGCCTGGTGGTCGCTCTTGGGGCACGTGGGTGATTCAATAGGGTGCTTAGATGGGGGGGGGTGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCa < 2:1845438/147‑1 (MQ=37) tgtgTTCGTCTGGGTTTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACCTGCTTGAATGACTATGGTGCTTATATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCTGCGCAGcccaat < 2:2026760/150‑4 (MQ=255) gtgtTCGTCTGGGTGTCCGGGGAAATCCTGTGGGTCGCTCTTGGGGACCCGGCGTTAATGACTTTGGTGCTTAGATGGGGCGGGGTGGT‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCTGCGCAGcccaatc < 2:1858641/150‑5 (MQ=255) gtTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGGat > 1:1150131/1‑150 (MQ=255) gtTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAat > 1:2830389/1‑150 (MQ=255) ttCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCCATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAatc > 2:3780697/1‑150 (MQ=255) ggcAGGGGGTTCGGGGAACGCCTGCTGGTCGCTCATGGGGCACCTGCGTGAAGGACTATGGGGCTTCGATGGGGCGGGGCGGG‑TTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAatccat < 2:2443142/148‑1 (MQ=38) gTCTGGGTGTTGGGGTAAATCGTGCTGGTCGCTCAGGGGGCACGTGCTTTATTCACTTTGGTGTTTAGTGGGGGGGGGGTGGT‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAatccat < 1:148625/150‑1 (MQ=25) gTCAGGGTGTTCGGGGAATTCCTGCTGGTCGCTCATGGGGCACCTGCGTTAATGACTATGGTGCTTATATGGGGGGGGTTGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAatccat < 2:3398849/150‑1 (MQ=39) gTCAGGGTGTTCGGGGAATTCCTGCTGGTCGCTCAGGGGGAACCTGGGTGAATGACTATGGTGCTTATATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAatccat < 2:4379268/150‑1 (MQ=39) tctgggTGTTCGGGGAAATCGTGCTGGTCGATCTTGGGGAACCTGCGTTTATTACTTTGGTGCTTATATGGGGGGGGGCGGT‑TTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAatccatc < 1:1186456/147‑1 (MQ=37) cAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACCTGCTTGAATGACTATGGTGCTTAGATGGGGGGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAatccatcc < 2:3138838/150‑1 (MQ=255) aGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAAtccatcca > 2:2970340/1‑150 (MQ=255) tCGGGGAAATCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCt > 2:3941841/1‑150 (MQ=255) ggggAAATCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAg > 1:4425123/1‑150 (MQ=255) ggggAAATCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAg > 1:9510/1‑150 (MQ=255) ggtaaaTCGTGGTGGTCGCTCTTGGGGCACCTGGGTTATTTACTTTGGTGTTTTGTTGGGGGGGGTTGGG‑TTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGa < 1:3467253/147‑1 (MQ=25) gggAAATCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGa > 2:2459027/1‑150 (MQ=255) tcgtggtgGTCGCTCTTGGGCCACGGGGGTTATTTACTTTGGTGCTTTTTTGGGGGGGGGTGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTg < 1:497968/144‑1 (MQ=25) tcgtgctgGTCGCTCTTGGGGCACGTGGGTGATTGACTTGGGGGCTTCG‑TGGGGGGGGGTGGGTATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTg < 1:497990/147‑1 (MQ=37) tCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTg < 2:2512248/150‑1 (MQ=255) tgctgGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTgggg > 2:1622923/1‑150 (MQ=255) tgctgGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTgggg > 2:3112460/1‑150 (MQ=255) ggggggTCGCTCTTGGGGCCCGTGCTTTTTTGAATTGGGTGCTTATAGGGGGGGGGGTGGT‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTgggg < 1:4065231/146‑1 (MQ=25) ggTCGCTCTTGGGGCACCTGCGTGAAGGACTAGGGTGCTTAGATGGGGCGGGGAGGG‑AGGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGc < 2:1049277/150‑1 (MQ=255) gCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTACAATGGGTCGGGAGCAGCCTTGTGTCGCTATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTgcg > 2:3728999/1‑150 (MQ=255) tCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGcgcg > 2:1464456/1‑150 (MQ=255) tCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGcgcg > 1:2487136/1‑150 (MQ=255) cATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGa > 1:2978151/1‑150 (MQ=255) tgggggCACCTGCGTGATGTACTTGGGTGTTTATATGGGGGGGGGGGGG‑TTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGAc < 1:3792904/148‑1 (MQ=38) gggCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGAGTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGa > 2:4497538/1‑150 (MQ=255) gCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑AGGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGaaa > 1:1700541/1‑150 (MQ=255) cACGTGCGTGACTGACTTTGGTGCTTTGTTGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAAc < 2:2386697/150‑1 (MQ=39) gAATGACTCTGGTGCTTTGATGGGGCGGGGCGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACaa < 2:1238688/150‑1 (MQ=255) ggTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTccc > 1:1072476/1‑150 (MQ=255) ggTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTccc > 1:3996412/1‑150 (MQ=255) gCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTct > 1:3556880/1‑149 (MQ=255) cTTAGTTGGGGCGGGGTGGG‑TGGGG‑TTTCTATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCTTTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAg < 2:1280007/150‑1 (MQ=38) tggg‑ttggg‑ttTCATTGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCATAATCCATCCAGCATTCTTGTTCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGa < 1:2342575/149‑1 (MQ=39) tggtaTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGTTTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCTAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGa < 1:3619716/146‑1 (MQ=255) ggg‑ttgggttTTCACTGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCGCAGGCTCAACCCTGAGGGa < 1:1449163/150‑1 (MQ=37) gg‑aTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGc < 2:477188/150‑1 (MQ=255) ggctGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGc < 2:3298943/147‑1 (MQ=255) g‑aTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCg > 1:206251/1‑150 (MQ=255) g‑aTGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCg > 1:343095/1‑150 (MQ=255) tGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGgt < 2:863422/150‑1 (MQ=255) tGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGgt > 2:1384338/1‑150 (MQ=255) g‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACGCAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTc < 1:4171837/150‑1 (MQ=255) g‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTc > 1:3616790/1‑150 (MQ=255) tttCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCg > 1:730657/1‑150 (MQ=255) ttCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGCCACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGc < 1:2459293/150‑1 (MQ=255) ttCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCggccttgt < 2:4229518/150‑7 (MQ=255) ttCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGc < 2:142350/150‑1 (MQ=255) cAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCtt > 2:2038955/1‑150 (MQ=255) aTGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTAc > 2:1191171/1‑150 (MQ=255) gTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGAGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCg > 1:2666394/1‑150 (MQ=255) ttggggAGCAGCCTTGTGTCGCGTTTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGAATTCTAGATCGTTGGGGCCGCGGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCgg < 1:871245/147‑1 (MQ=255) ggAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTaa < 2:3522527/150‑1 (MQ=255) gAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCTAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAAt < 1:2122573/150‑1 (MQ=255) agcagcCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAAtt > 2:845374/1‑150 (MQ=255) gcagcCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAAttt < 2:4012729/150‑1 (MQ=255) agcCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGt < 1:1177539/150‑1 (MQ=255) agcCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGt < 1:1432818/150‑1 (MQ=255) agcCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGt < 1:1196799/150‑1 (MQ=255) agcCTTGTGGCGCGATTGGGCGGCGCAGCAGCCCCAGAATCCATCCAGCAGTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGt < 2:4183232/150‑1 (MQ=255) ttGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAg < 1:1740600/149‑1 (MQ=255) tgtgTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCa > 2:1681914/1‑150 (MQ=255) tCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTTGGCTAATTTGTAAGCAatga < 2:1228700/150‑1 (MQ=255) tCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAatga < 1:2459027/150‑1 (MQ=255) tCGCGATGGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGCTCGTTGGGGCCGCTGCGCGACCGAACCGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAatga < 2:4328827/150‑1 (MQ=255) gcgATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAatgatg < 1:1460392/150‑1 (MQ=255) attctggggCTGCTGCGCAGCCCAAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAatgatg > 1:2730758/7‑150 (MQ=255) tctggggCTGCTGCGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACCAGGCCGCTCCCTCAGGGTTGCGCCTGCGGGAGCGGTGTCGCTTCCTCGGCTAATTTGTAAGCACTGATGTa > 1:2471920/5‑150 (MQ=255) tctggggCTGCTGCGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTa > 1:1137990/5‑150 (MQ=255) tctggggCTGCTGCGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTa > 1:2471738/5‑150 (MQ=255) tctggggCTGCTGCGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTa > 1:2471840/5‑150 (MQ=255) tctggggCTGCTGCGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTa > 2:2889261/5‑150 (MQ=255) tctggggCTGCTGCGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTa > 1:3448752/5‑150 (MQ=255) aTTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTaa > 2:3334327/1‑150 (MQ=255) tGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTTGATCGTTGGGGCCGCTGGGCGCCCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTAATc < 1:1926127/150‑1 (MQ=255) ggCTGCGCAGCAGCCCCATAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTAATCGc < 1:667949/150‑1 (MQ=255) ggCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTAATCGc > 2:3709017/1‑150 (MQ=255) gCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTAATCGcc > 2:2170340/1‑150 (MQ=255) cTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTAATCGccc > 1:2037022/1‑150 (MQ=255) cgcAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCgg < 2:410773/98‑1 (MQ=255) cgcAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCgg > 1:410593/1‑98 (MQ=255) cgcAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCgg > 1:410773/1‑98 (MQ=255) gcagcaGCCCCAGAATCCATCCAGCAGTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGCGCCTGCGGGAGCGGTGTCGCTTCCGCGGCTAATTTGTAAGCAATGAGGTAATCGCCCATcg > 2:4153714/1‑149 (MQ=255) cagcagCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTAATCGCCCATCtt > 2:1596185/1‑150 (MQ=255) | TCGACTTCGCTGTGTTCGTCAGGGTGTTCGGGGAAATCCTGCTGGTCGCTCATGGGGCACCTGCGTGAATGACTATGGTGCTTAGATGGGGCGGGGAGGG‑ATGGG‑TTTCAATGGTTCGGGAGCAGCCTTGTGTCGCGATTGGGCTGCGCAGCAGCCCCAGAATCCATCCAGCATTCTAGATCGTTGGGGCCGCTGCGCGACCGAAACGCGACACAAGGCCGCTCCCTCAGGGTTGAGCCTGCGGGAGCGGTGTCGCTTACTCGGCTAATTTGTAAGCAATGATGTAATCGCCCATCTT > NC_002947/1644731‑1645028 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |