Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,704,678 T→A 6.5% M1M (TTG→ATG) †‡ PP_1499 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,704,6780TA 6.5% 597.0 / 24.1 213M1M (TTG→ATG) †‡PP_1499hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (79/111);  new base A (12/2);  total (98/115)
Fisher's exact test for biased strand distribution p-value = 1.59e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.07e-01

Only 100 of 214 total aligned reads displayed.

CCGGAGGACAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGGACGACAA  >  NC_002947/1704530‑1704826
                                                                                                                                                    |                                                                                                                                                    
ccGGAGGACAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCtt                                                                                                                                                     >  1:3365418/1‑150 (MQ=255)
  ggaggaCAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGc                                                                                                                                                   <  2:2419127/150‑1 (MQ=255)
   gaggaCAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGcc                                                                                                                                                  >  1:2144149/1‑150 (MQ=255)
        cAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGa                                                                                                                                             >  2:4458914/1‑150 (MQ=255)
         aaCGGCGTCGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTTCCTGGACGACCCGGCCAAGTCCGACCTGTTCGTCGTAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGaa                                                                                                                                            <  1:2538233/150‑1 (MQ=255)
         aaCGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGaa                                                                                                                                            <  1:3622865/150‑1 (MQ=255)
           cggcgacggcgTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAaga                                                                                                                                          <  1:2064180/150‑1 (MQ=255)
            ggcgacggcgTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAagag                                                                                                                                         <  1:1096131/150‑1 (MQ=255)
            ggcgacggcgTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAagag                                                                                                                                         <  2:3511458/150‑1 (MQ=255)
                acggcgTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCAAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCg                                                                                                                                     <  1:262044/150‑1 (MQ=255)
                      tGCTGATCGACAGCCCGGGGGCGCGGGTGCTGGCCTACCTGGACGACCGGGCCAAATCGGACCTGTTCGTCGATGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCTAAGAGGCCGGTACAg                                                                                                                               <  2:1981340/150‑1 (MQ=255)
                      tGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCTAAGAGGCCGGTACAg                                                                                                                               <  2:4253671/150‑1 (MQ=255)
                             cGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCgt                                                                                                                        <  2:2305792/150‑1 (MQ=255)
                              gACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCgtg                                                                                                                       >  2:4353954/1‑150 (MQ=255)
                                 aGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTAc                                                                                                                    <  1:2180989/150‑1 (MQ=255)
                                 aGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTAc                                                                                                                    >  1:4380611/1‑150 (MQ=255)
                                   cccGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTa                                                                                                                  >  2:728288/1‑150 (MQ=255)
                                    ccGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGCAGAGGCCGGTACAGGGTTCGTGTACTAg                                                                                                                 >  2:623226/1‑150 (MQ=255)
                                       gcggcgCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGATGGGGCGGGGTTCCAGCGCTGGGGCAAAGGCCGGTGTTGGCGTGTTGGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGaaa                                                                                                              <  1:3831672/150‑1 (MQ=255)
                                       gcggcgCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGaaa                                                                                                              <  1:334368/150‑1 (MQ=255)
                                        gggcgGGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGATGTGGCGCGGTTCCAGCGCTCGGGAAAATGACCGTGTTGGCTTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAg                                                                                                             <  1:2170119/149‑1 (MQ=255)
                                        cggcgCGGGTGCTGGCCTACCTGGACGACCCGGCCACCTCCGACCTGTTCGGCGAAGTGGCGCGGTTCCAGCGCTCGGGCACATGACCGTGTGGGCGTCTTCGCGGGGGTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAg                                                                                                             <  2:2431781/150‑1 (MQ=255)
                                          gcgcGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGa                                                                                                           <  2:4404314/150‑1 (MQ=255)
                                            gcgGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGt                                                                                                         >  2:2698189/1‑150 (MQ=255)
                                            gcgGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGt                                                                                                         >  2:1056953/1‑150 (MQ=255)
                                            gcgGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGt                                                                                                         >  1:3678284/1‑150 (MQ=255)
                                               ggTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTcc                                                                                                      >  2:2878755/1‑150 (MQ=255)
                                               ggTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTcc                                                                                                      <  2:1756687/150‑1 (MQ=255)
                                                gTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGTTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTccc                                                                                                     >  2:3191194/1‑150 (MQ=255)
                                                    tGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTg                                                                                                 >  2:3429762/1‑150 (MQ=255)
                                                      gCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGACGTGGCGCGGTTCCAGCGCTGGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGa                                                                                               <  1:3991422/150‑1 (MQ=255)
                                                      gCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTGCCGGTGGa                                                                                               >  1:2949436/1‑150 (MQ=255)
                                                       ccTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGACGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCGTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGGTCCCGGTGGAc                                                                                              <  2:1350894/150‑1 (MQ=255)
                                                       ccTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCTGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCGCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGAc                                                                                              <  2:2615716/150‑1 (MQ=255)
                                                       ccTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGTTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGAc                                                                                              <  1:3191194/150‑1 (MQ=255)
                                                         tACCTGGACGACCCGGCAAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGa                                                                                            <  1:1804053/150‑1 (MQ=255)
                                                           ccTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCGTGCCCGCGCAGTGGCCCGGACAGGGTTGGGGTACGAGAAAGGAGTTGCCGGGGGACGaaa                                                                                          >  1:1149338/1‑149 (MQ=255)
                                                           ccTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCGTCGCGGGCGTGCCCGCGCAGAGGCCGGTACAGGTTTCGGGTACTCGCAAGGCGGTCCCGGGGGACGAAt                                                                                          >  2:410264/1‑150 (MQ=255)
                                                            cTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTAGTGTACTAGAAAGGAGTTACCGGTGGACGAATa                                                                                         >  1:304260/1‑150 (MQ=255)
                                                            cTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAAATGCCGGTTAAGGTTTTGTGTAATATAAATTAGTTACCGGTTGGAGAATa                                                                                         >  1:4218216/1‑150 (MQ=255)
                                                             tGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGAAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATAc                                                                                        <  2:1575122/150‑1 (MQ=255)
                                                                acgacCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAg                                                                                     <  2:3753179/150‑1 (MQ=255)
                                                                 cgacCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGc                                                                                    <  2:4392829/150‑1 (MQ=255)
                                                                    cccGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCaaa                                                                                 >  2:2625525/1‑150 (MQ=255)
                                                                    cccGGCCAACTCCGACCTGTTCGACGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGATGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACAAGAAAGGAGTTCCCGGTGGACGAATACCAGCaaa                                                                                 >  2:367690/1‑150 (MQ=255)
                                                                      cGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCaaaac                                                                               >  2:588598/1‑148 (MQ=255)
                                                                      cGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCCGGACAGGTTTTGTGTACAAGAAAGGAGTTACCGGTGGACGAATAACAGCAAAcc                                                                               >  1:806230/1‑150 (MQ=255)
                                                                       ggCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCa                                                                              >  2:3040781/1‑150 (MQ=255)
                                                                       ggCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCGTGGCCCCGAAGAGGCCGGTAAACGGTTCGTGTACTAGAAAGGAGTTACCGGTGGACGAATAACAGCAAAACa                                                                              >  1:3413432/1‑150 (MQ=255)
                                                                        gCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCAt                                                                             <  1:4353954/150‑1 (MQ=255)
                                                                          cAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGGGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAAACATcc                                                                           >  2:224297/1‑150 (MQ=255)
                                                                           aaCTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCcg                                                                          >  2:2651856/1‑150 (MQ=255)
                                                                           aaCTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCcg                                                                          >  2:3657286/1‑150 (MQ=255)
                                                                              tCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCgcgc                                                                       >  2:1079078/1‑150 (MQ=255)
                                                                              tCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCgcgc                                                                       >  2:3546399/1‑150 (MQ=255)
                                                                              tCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTACCGGTGGACGAATAACAGCAAACCAACCccgc                                                                       >  1:2895391/1‑150 (MQ=255)
                                                                                 gACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACGGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCt                                                                    <  1:840854/150‑1 (MQ=255)
                                                                                 gACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCt                                                                    >  2:2112951/1‑150 (MQ=255)
                                                                                    cTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTc                                                                 <  2:4435429/150‑1 (MQ=255)
                                                                                     tGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCTGTGGACGAATACCAGCAAACCATCCGCGCCCTGTcc                                                                <  2:3467926/150‑1 (MQ=255)
                                                                                     tGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTcc                                                                <  2:629038/150‑1 (MQ=255)
                                                                                     tGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTAGGGTAATAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCAGTcc                                                                >  1:1288254/1‑150 (MQ=255)
                                                                                      gTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCg                                                               >  2:1211038/1‑150 (MQ=255)
                                                                                      gTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCCGGCCCGCGAAGAGGCCCGTACACGTTTAGTGTACTAGAAAGGATTTGCCGGTGGTCGAATAAACACAAACCATACCCGCCCAGGCCg                                                               >  1:3391662/1‑150 (MQ=255)
                                                                                          gtcgAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTAGGCGACTTCGCCGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTAGTGTACTAGAAAGGAGTTCCCGGTGTACGAAAACCAGCAAACCATCCGCGCCCTGTCCGACCg                                                           >  2:2245549/1‑150 (MQ=255)
                                                                                           tcgAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGc                                                          >  2:769592/1‑150 (MQ=255)
                                                                                              aaGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCAtc                                                       <  2:1262513/150‑1 (MQ=255)
                                                                                                gTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCAtcgt                                                     >  1:1466978/1‑150 (MQ=255)
                                                                                                   gcgcGGTTCCTGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTcgc                                                  <  2:1801764/150‑1 (MQ=255)
                                                                                                   gcgcGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTTCCCCCGAACAGGCCCGTACACGTTTCGGGTAATATAAAGGAGTTCCCCGTGGACGTATACCACCCAAACAAACCCCCCCAGGCCCACCGCAACGTggc                                                  >  1:2472193/1‑150 (MQ=255)
                                                                                                     gcgGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCgg                                                >  1:4087287/1‑150 (MQ=255)
                                                                                                        gTTCCAGCGCGCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGcac                                             <  1:486620/150‑1 (MQ=255)
                                                                                                             aGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCCCAGACg                                        >  2:3860051/1‑150 (MQ=255)
                                                                                                             aGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACg                                        >  2:1312140/1‑150 (MQ=255)
                                                                                                              gcgcTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGc                                       <  1:3365205/150‑1 (MQ=255)
                                                                                                               cgcTCGGGCAAATGCCCGTTTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGcc                                      <  1:1588949/150‑1 (MQ=255)
                                                                                                                    gggCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCCAAGAGGCCCGTACAGGTTTCGTGTACGAGAAAGGAGGTCCCGGGGGGCGAATACCAGCCAACCCTCCGCGCCCGGTCCGACCGCCTCGGCGCCGCACAGACGCCGATcc                                 >  2:1145179/1‑150 (MQ=255)
                                                                                                                     ggCAAATGACCGTGTTGGCGTCTTCGCGGGCGTGCCCGCGAAGAGGCCGGTACACGGTTCGGGTACTAGAAAGGAGTTCCCGGTGGCCGAATACCAGCAAACCAACCCCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCg                                >  1:4434469/1‑150 (MQ=255)
                                                                                                                      gCAAATGACCGTGTTGGCGTCTTCGCGGGCTTTCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTACCGGTGGACGAATACCAGCAAACCATACGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCgg                               >  2:502859/1‑150 (MQ=255)
                                                                                                                      gCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATAGTCGCGGCACAGACGCCGATCCgg                               <  1:4361064/150‑1 (MQ=255)
                                                                                                                      gCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATACGCGCCCTGTCCGACCGCCTCGTCGCGGCACAGACGCCGATCCgg                               >  2:3217273/1‑150 (MQ=255)
                                                                                                                           tGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCt                          <  1:1834885/150‑1 (MQ=255)
                                                                                                                           tGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCt                          <  1:668962/150‑1 (MQ=255)
                                                                                                                            gACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCtt                         <  2:1001501/150‑1 (MQ=255)
                                                                                                                              ctgtaccggCCTCTTCGCGGGCAAGCCCGCGAAGACGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGa                       >  2:2068143/8‑150 (MQ=39)
                                                                                                                               cGTGTTGGCGTCTTCGCCGGCATGCCCGCCAAGAGGCCGGTACAGGTGTCGTGTACTAGAAAGGAGTTCCCGGGGGCCGAATACCAGCCACCCATCCGCCCCCGGTCCGACCGCCTCGGCGCGGCACAGACGCCGCTCCGGGTCCGTGAc                      >  2:3076946/1‑150 (MQ=255)
                                                                                                                                    tGGCGTCTTCGCGGGCTTGCCCGCGACGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGt                 <  1:104259/150‑1 (MQ=255)
                                                                                                                                     ggCGTCTGCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGGTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTg                <  2:4154449/150‑1 (MQ=255)
                                                                                                                                         tCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGt            >  1:4026295/1‑150 (MQ=255)
                                                                                                                                         tCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTCTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGt            <  2:661386/150‑1 (MQ=255)
                                                                                                                                          gttCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTg           <  1:2032790/149‑1 (MQ=255)
                                                                                                                                           ttCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg          <  1:2716111/150‑1 (MQ=255)
                                                                                                                                           ttCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg          >  1:2587527/1‑150 (MQ=255)
                                                                                                                                           ttCGCGGGCAAGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg          >  1:3430247/1‑150 (MQ=255)
                                                                                                                                           ttCGCGGGCAAGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg          >  1:2832580/1‑150 (MQ=255)
                                                                                                                                           ttCGCGGGCAAGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg          >  1:4510640/1‑150 (MQ=255)
                                                                                                                                           ttCGCGGGCAAGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg          >  2:1112891/1‑150 (MQ=255)
                                                                                                                                           tgcgcgGGCTGGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg          <  1:3645691/148‑1 (MQ=255)
                                                                                                                                            tCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTggg         >  2:2475816/1‑150 (MQ=255)
                                                                                                                                                   cTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGGACGacaa  <  2:3004528/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CCGGAGGACAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGGACGACAA  >  NC_002947/1704530‑1704826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑