Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,765,289 A→C 5.5% T138P (ACG→CCG) ‡ PP_1574 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,765,2890AC 5.5% 707.1 / 21.6 203T138P (ACG→CCG) ‡PP_1574hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (107/84);  new base C (7/4);  total (114/89)
Fisher's exact test for biased strand distribution p-value = 7.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.33e-01

Only 100 of 204 total aligned reads displayed.

GACCCGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAGCGCGCCACGGGCCT  >  NC_002947/1765142‑1765436
                                                                                                                                                   |                                                                                                                                                   
gACCCGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACg                                                                                                                                                   <  1:1955052/150‑1 (MQ=255)
 aCCCGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGa                                                                                                                                                  <  1:3622181/150‑1 (MQ=255)
 aCCCGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCGATTCGGGAGGTCAACGACCTGGGACAGACGATGAGCTCACCGAGCTCGACGAGCTCTGGcgcgg                                                                                                                                                  >  2:3830390/1‑149 (MQ=255)
  cccGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAg                                                                                                                                                 <  2:4001667/150‑1 (MQ=255)
     ggTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTc                                                                                                                                              <  2:2985260/150‑1 (MQ=255)
     ggTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTc                                                                                                                                              <  2:1337397/150‑1 (MQ=255)
        tGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCGTGCCAGAGCTCGTc                                                                                                                                           <  2:4450094/150‑1 (MQ=255)
          aaCTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCGTGCCAGAGCTCGTcga                                                                                                                                         <  1:2829398/150‑3 (MQ=255)
            cTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCctct                                                                                                                                       <  2:3006200/150‑1 (MQ=255)
              ggAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTcc                                                                                                                                     >  1:4068712/1‑150 (MQ=255)
               gagaAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCg                                                                                                                                    >  2:2408589/1‑150 (MQ=255)
               gagaAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCg                                                                                                                                    <  1:2815349/150‑1 (MQ=255)
                    ggACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATc                                                                                                                               <  2:2065606/150‑1 (MQ=255)
                    ggACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCGATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATc                                                                                                                               >  2:4301422/1‑150 (MQ=255)
                         cGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCGGGGACAGACGAAGAGCTCACCGAGCTCGCCGAGCTCTGGCACGAGCTCGTGCTCTCCGGCCTcggcgg                                                                                                                          >  2:4037065/1‑150 (MQ=255)
                           gagaGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCt                                                                                                                        <  2:2185285/150‑1 (MQ=255)
                              agCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTcga                                                                                                                     <  2:3795247/150‑1 (MQ=255)
                                cACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTcgacg                                                                                                                   >  1:2991687/1‑150 (MQ=255)
                                   cAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATc                                                                                                                >  1:4034229/1‑150 (MQ=255)
                                   cAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATc                                                                                                                >  2:3045032/1‑150 (MQ=255)
                                   cAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATc                                                                                                                <  1:3836659/150‑1 (MQ=255)
                                    aaGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATcg                                                                                                               >  1:1555827/1‑150 (MQ=255)
                                        gcCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCa                                                                                                           <  1:870901/150‑1 (MQ=255)
                                         ccTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAg                                                                                                          >  1:2137063/1‑150 (MQ=255)
                                         ccTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAg                                                                                                          <  2:3601619/150‑1 (MQ=255)
                                          cTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAgg                                                                                                         >  1:4369375/1‑150 (MQ=255)
                                               aTCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCaaa                                                                                                    <  1:1712754/150‑1 (MQ=255)
                                               aTCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCaaa                                                                                                    <  2:173395/150‑1 (MQ=255)
                                               aTCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCaaa                                                                                                    <  2:3338879/150‑1 (MQ=255)
                                                tctcTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAg                                                                                                   <  2:2861095/150‑1 (MQ=255)
                                                   ctTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGTCGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGaaa                                                                                                >  2:3020115/1‑150 (MQ=255)
                                                    ttGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGaaaa                                                                                               >  2:1067457/1‑150 (MQ=255)
                                                    ttGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGaaa                                                                                                <  2:1366522/149‑1 (MQ=255)
                                                      gATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAAcc                                                                                             <  2:2288749/150‑1 (MQ=255)
                                                        tGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTg                                                                                           >  1:342100/1‑150 (MQ=255)
                                                         ggcgtgcTGTCCGTCGCGCTGCTGGTAGGTATTCGTGAGGTGATCGAGCTGGGTTTGACGAAGAGCTCTCCGTGGTCGACGAGCTCTGGCTCGAGCTGGTCCTGTCCGGAAGCGGCGGGTCGACGATGGGGCTGGGCAAAGTAAAGCTGa                                                                                          <  2:3511111/144‑1 (MQ=255)
                                                         ggCGACCTGTCCGTCGCGCTGCTGGTAGCTAGTCGGGAGGGCAACGACCTGGGAAAGACGACGAGCTCACCGAGCTCGACGAGCTCGGGCACGAGCTCGTCCTCTCCGTCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGa                                                                                          <  2:2146664/150‑1 (MQ=255)
                                                          gCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAg                                                                                         >  2:3731981/1‑150 (MQ=255)
                                                           cGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCG‑‑‑‑‑‑‑‑TGCCA‑GAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAg                                                                               <  1:3939120/150‑1 (MQ=255)
                                                                tGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCg                                                                                   >  2:14628/1‑150 (MQ=255)
                                                                tGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCg                                                                                   >  1:1494294/1‑150 (MQ=255)
                                                                tGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCg                                                                                   <  1:2122805/150‑1 (MQ=255)
                                                                 gTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGt                                                                                  <  1:4387865/150‑1 (MQ=255)
                                                                  tCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTg                                                                                 >  2:1647809/1‑150 (MQ=255)
                                                                  tCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTg                                                                                 >  2:4086545/1‑150 (MQ=255)
                                                                      tCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAg                                                                                                          <  2:1824339/121‑1 (MQ=255)
                                                                      tCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAg                                                                                                          >  1:1824339/1‑121 (MQ=255)
                                                                      tCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGtt                                                                             >  2:1115538/1‑150 (MQ=255)
                                                                      tCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCAGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGTGCCTGCGTGAGtt                                                                             >  2:315522/1‑150 (MQ=255)
                                                                        gcgcTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCa                                                                           <  2:2648802/150‑1 (MQ=255)
                                                                         cgcTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAg                                                                          <  2:2319308/150‑1 (MQ=255)
                                                                          gctgctGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAgg                                                                         >  1:416771/1‑150 (MQ=255)
                                                                            tgctgGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTc                                                                       >  1:1016748/1‑150 (MQ=255)
                                                                               tgGTAGCTCTTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTg                                                                    <  1:983237/150‑1 (MQ=255)
                                                                               tgGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTg                                                                    <  1:718085/150‑1 (MQ=255)
                                                                                ggTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTgg                                                                   <  1:3811017/150‑1 (MQ=255)
                                                                                 gTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCTAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTggg                                                                  >  2:1039785/1‑150 (MQ=255)
                                                                                 gTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTggg                                                                  >  2:1039731/1‑150 (MQ=255)
                                                                                 gTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTggg                                                                  <  1:1916237/150‑1 (MQ=255)
                                                                                    gCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGgaga                                                               >  2:779888/1‑150 (MQ=255)
                                                                                    gCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGgaga                                                               >  1:3161873/1‑150 (MQ=255)
                                                                                     cTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGa                                                                                          >  2:2596694/1‑122 (MQ=255)
                                                                                     cTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGa                                                                                          <  1:2596694/122‑1 (MQ=255)
                                                                                     cTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGaa                                                              <  1:134753/150‑1 (MQ=255)
                                                                                     cTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGaa                                                              <  1:2253566/150‑1 (MQ=255)
                                                                                        ttCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTa                                                           >  2:455295/1‑150 (MQ=255)
                                                                                        ttCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTa                                                           <  1:820312/150‑1 (MQ=255)
                                                                                        ttCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTa                                                           >  1:2554953/1‑150 (MQ=255)
                                                                                           gggAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAg                                                        <  2:2004894/150‑1 (MQ=255)
                                                                                           gggAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAg                                                        >  2:2134946/1‑150 (MQ=255)
                                                                                           gggAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAg                                                        >  1:1263837/1‑150 (MQ=255)
                                                                                           gggAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAg                                                        <  1:2961237/150‑1 (MQ=255)
                                                                                            ggAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAgg                                                       <  2:601419/150‑1 (MQ=255)
                                                                                                   gaCGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGGCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAGGTACAGGCAGCTcc                                                >  1:4303789/2‑150 (MQ=255)
                                                                                                   aaCGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTcc                                                >  2:3440134/1‑150 (MQ=255)
                                                                                                   aaCGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTcc                                                >  1:52243/1‑150 (MQ=255)
                                                                                                          tGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTc                                         <  2:1603272/150‑1 (MQ=255)
                                                                                                             gAAAGACGAAGAGCTCACCGAGCTCGTCGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCt                                      <  1:3020503/150‑1 (MQ=255)
                                                                                                             gAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCt                                      >  1:2377524/1‑150 (MQ=255)
                                                                                                             gAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCt                                      >  2:3952302/1‑150 (MQ=255)
                                                                                                                 gACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCAt                                  >  2:1030484/1‑150 (MQ=255)
                                                                                                                    gAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTc                               >  1:3008949/1‑150 (MQ=255)
                                                                                                                    gAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTc                               >  1:739485/1‑150 (MQ=255)
                                                                                                                      agagCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCgg                             >  1:949211/1‑150 (MQ=255)
                                                                                                                      agagCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCgg                             >  2:2626645/1‑150 (MQ=255)
                                                                                                                       gagCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCggg                            >  1:290656/1‑150 (MQ=255)
                                                                                                                             aCCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATgcgc                      >  1:4426799/1‑150 (MQ=255)
                                                                                                                               cGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGt                    >  1:162878/1‑150 (MQ=255)
                                                                                                                               cGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGt                    <  2:1523113/150‑1 (MQ=255)
                                                                                                                               cGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGt                    <  2:342100/150‑1 (MQ=255)
                                                                                                                                    tCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAgc               >  2:522039/1‑150 (MQ=255)
                                                                                                                                      gacgaGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAgcgc             >  1:1160359/1‑150 (MQ=255)
                                                                                                                                      gacgaGCTCGTGCCAGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAgcgc             >  2:2513599/1‑150 (MQ=255)
                                                                                                                                      gacgaGCTCGTGCCAGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAgcgc             >  2:573153/1‑150 (MQ=255)
                                                                                                                                        cgaGCTCTGGCACGCGCTCGTCCTCTCCGGCATCGGCGGCGCGACGATCGCGCAGGCCAAAGAACCCCTGAGCCTGCGTGAGTTCAGGTCGTGGGAGAAGTACAGGCAGCTCCGGGGCTCGCTGCATGTCGGGATGCGCGTGGAgcgcgc           <  2:1241403/150‑1 (MQ=255)
                                                                                                                                            ctctGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAGCGCGCCACg       >  2:2829270/1‑150 (MQ=255)
                                                                                                                                              ctGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAGCGCGCCACggg     <  1:802615/150‑1 (MQ=255)
                                                                                                                                               tGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAGCGCGCCACGGGc    <  1:1078173/150‑1 (MQ=255)
                                                                                                                                                ggCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAGCGCGCCACGGGcc   <  2:3900895/150‑1 (MQ=255)
                                                                                                                                                 gCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAGCGCGCCACGGGCct  >  2:1313830/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GACCCGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAGCGCGCCACGGGCCT  >  NC_002947/1765142‑1765436

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑