BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,765,290	C→A	5.5%	T138K (ACG→AAG) ‡	PP_1574 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,765,290	0	C	A	5.5%	694.1 / 20.9	203	T138K (ACG→AAG) ‡	PP_1574	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (107/84); new base A (7/4); total (114/89)
Fisher's exact test for biased strand distribution p-value = 7.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.64e-01

Only 100 of 205 total aligned reads displayed.

GACCCGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAGCGCGCCACGGGCCTGCT  >  NC_002947/1765142‑1765439

gACCCGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACg                                                                                                                                                      <  1:1955052/150‑1 (MQ=255)

 aCCCGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGa                                                                                                                                                     <  1:3622181/150‑1 (MQ=255)

 aCCCGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCGATTCGGGAGGTCAACGACCTGGGACAGACGATGAGCTCACCGAGCTCGACGAGCTCTGGcgcgg                                                                                                                                                     >  2:3830390/1‑149 (MQ=255)

  cccGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAg                                                                                                                                                    <  2:4001667/150‑1 (MQ=255)

     ggTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTc                                                                                                                                                 <  2:1337397/150‑1 (MQ=255)

        tGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCGTGCCAGAGCTCGTc                                                                                                                                              <  2:4450094/150‑1 (MQ=255)

          aaCTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCGTGCCAGAGCTCGTcga                                                                                                                                            <  1:2829398/150‑3 (MQ=255)

            cTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCctct                                                                                                                                          <  2:3006183/150‑1 (MQ=255)

              ggAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTcc                                                                                                                                        >  1:4068712/1‑150 (MQ=255)

               gagaAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCg                                                                                                                                       >  2:2408589/1‑150 (MQ=255)

               gagaAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCg                                                                                                                                       <  1:2815349/150‑1 (MQ=255)

                    ggACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATc                                                                                                                                  <  2:2065606/150‑1 (MQ=255)

                    ggACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCGATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATc                                                                                                                                  >  2:4301422/1‑150 (MQ=255)

                         cGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCGGGGACAGACGAAGAGCTCACCGAGCTCGCCGAGCTCTGGCACGAGCTCGTGCTCTCCGGCCTcggcgg                                                                                                                             >  2:4037065/1‑150 (MQ=255)

                           gagaGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCt                                                                                                                           <  2:2185285/150‑1 (MQ=255)

                              agCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTcga                                                                                                                        <  2:3795247/150‑1 (MQ=255)

                                cACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTcgacg                                                                                                                      >  1:2991684/1‑150 (MQ=255)

                                cACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTcgacg                                                                                                                      >  1:2991730/1‑150 (MQ=255)

                                   cAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATc                                                                                                                   >  1:4034229/1‑150 (MQ=255)

                                   cAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATc                                                                                                                   <  1:3836659/150‑1 (MQ=255)

                                    aaGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATcg                                                                                                                  >  1:1555827/1‑150 (MQ=255)

                                         ccTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAg                                                                                                             >  1:2137063/1‑150 (MQ=255)

                                         ccTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAg                                                                                                             <  1:771412/150‑1 (MQ=255)

                                         ccTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAg                                                                                                             <  2:1601373/150‑1 (MQ=255)

                                         ccTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAg                                                                                                             <  2:3601619/150‑1 (MQ=255)

                                          cTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAgg                                                                                                            >  1:4369375/1‑150 (MQ=255)

                                           tGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGc                                                                                                           >  2:1078173/1‑150 (MQ=255)

                                               aTCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCaaa                                                                                                       <  2:3338879/150‑1 (MQ=255)

                                               aTCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCaaa                                                                                                       <  1:1712754/150‑1 (MQ=255)

                                                tctcTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAg                                                                                                      <  2:2861095/150‑1 (MQ=255)

                                                   ctTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGTCGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGaaa                                                                                                   >  2:3020503/1‑150 (MQ=255)

                                                    ttGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGaaa                                                                                                   <  2:1366522/149‑1 (MQ=255)

                                                     tGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAAc                                                                                                 >  1:2908442/1‑150 (MQ=255)

                                                      gATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAAcc                                                                                                <  2:2288749/150‑1 (MQ=255)

                                                        tGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTg                                                                                              >  1:342100/1‑150 (MQ=255)

                                                         ggcgtgcTGTCCGTCGCGCTGCTGGTAGGTATTCGTGAGGTGATCGAGCTGGGTTTGACGAAGAGCTCTCCGTGGTCGACGAGCTCTGGCTCGAGCTGGTCCTGTCCGGAAGCGGCGGGTCGACGATGGGGCTGGGCAAAGTAAAGCTGa                                                                                             <  2:3511111/144‑1 (MQ=255)

                                                         ggCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGa                                                                                             <  2:3069888/150‑1 (MQ=255)

                                                         ggCGACCTGTCCGTCGCGCTGCTGGTAGCTAGTCGGGAGGGCAACGACCTGGGAAAGACGACGAGCTCACCGAGCTCGACGAGCTCGGGCACGAGCTCGTCCTCTCCGTCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGa                                                                                             <  2:2146664/150‑1 (MQ=255)

                                                          gCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAg                                                                                            >  2:3731981/1‑150 (MQ=255)

                                                           cGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCG‑‑‑‑‑‑‑‑TGCCA‑GAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAg                                                                                  <  1:3939120/150‑1 (MQ=255)

                                                                tGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCg                                                                                      >  1:1494294/1‑150 (MQ=255)

                                                                tGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCg                                                                                      <  1:2122805/150‑1 (MQ=255)

                                                                tGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCg                                                                                      >  2:14628/1‑150 (MQ=255)

                                                                 gTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGt                                                                                     <  1:4387865/150‑1 (MQ=255)

                                                                  tCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTg                                                                                    >  2:4086545/1‑150 (MQ=255)

                                                                      tCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAg                                                                                                             <  2:1824339/121‑1 (MQ=255)

                                                                      tCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAg                                                                                                             >  1:1824339/1‑121 (MQ=255)

                                                                      tCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGtt                                                                                >  2:1115538/1‑150 (MQ=255)

                                                                        gcgcTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCa                                                                              <  2:2648802/150‑1 (MQ=255)

                                                                         cgcTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAg                                                                             <  2:2319308/150‑1 (MQ=255)

                                                                          gctgctGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAgg                                                                            >  1:416771/1‑150 (MQ=255)

                                                                           ctgctgGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGt                                                                           >  1:94132/1‑150 (MQ=255)

                                                                            tgctgGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTc                                                                          >  1:1016748/1‑150 (MQ=255)

                                                                               tgGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTg                                                                       <  1:718085/150‑1 (MQ=255)

                                                                                ggTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTgg                                                                      <  1:3811017/150‑1 (MQ=255)

                                                                                 gTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTggg                                                                     >  2:1039701/1‑150 (MQ=255)

                                                                                 gTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTggg                                                                     >  2:1039782/1‑150 (MQ=255)

                                                                                 gTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTggg                                                                     >  2:300676/1‑150 (MQ=255)

                                                                                 gTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTggg                                                                     <  1:1916237/150‑1 (MQ=255)

                                                                                    gCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGgaga                                                                  >  2:779888/1‑150 (MQ=255)

                                                                                    gCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGgaga                                                                  >  1:3161873/1‑150 (MQ=255)

                                                                                     cTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGa                                                                                             <  1:2596694/122‑1 (MQ=255)

                                                                                     cTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGa                                                                                             >  2:2596694/1‑122 (MQ=255)

                                                                                     cTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGaa                                                                 <  1:134753/150‑1 (MQ=255)

                                                                                     cTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGaa                                                                 <  1:2253566/150‑1 (MQ=255)

                                                                                        ttCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTa                                                              >  2:455295/1‑150 (MQ=255)

                                                                                        ttCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTa                                                              >  1:2554953/1‑150 (MQ=255)

                                                                                           gggAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAg                                                           <  2:2004894/150‑1 (MQ=255)

                                                                                           gggAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAg                                                           >  1:1263837/1‑150 (MQ=255)

                                                                                           gggAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAg                                                           >  2:2134946/1‑150 (MQ=255)

                                                                                            ggAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAgg                                                          <  2:601419/150‑1 (MQ=255)

                                                                                                  cAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTc                                                    >  1:3036676/1‑150 (MQ=255)

                                                                                                   gaCGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGGCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAGGTACAGGCAGCTcc                                                   >  1:4303789/2‑150 (MQ=255)

                                                                                                   aaCGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTcc                                                   >  2:1660766/1‑150 (MQ=255)

                                                                                                   aaCGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTcc                                                   >  1:52243/1‑150 (MQ=255)

                                                                                                   aaCGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTcc                                                   >  2:3440134/1‑150 (MQ=255)

                                                                                                          tGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTc                                            >  2:2874951/1‑150 (MQ=255)

                                                                                                             gAAAGACGAAGAGCTCACCGAGCTCGTCGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCt                                         <  1:3020115/150‑1 (MQ=255)

                                                                                                             gAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCt                                         >  2:3952302/1‑150 (MQ=255)

                                                                                                             gAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCt                                         >  1:2377524/1‑150 (MQ=255)

                                                                                                                 gACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCAt                                     >  2:1030441/1‑150 (MQ=255)

                                                                                                                      agagCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCgg                                >  2:2626645/1‑150 (MQ=255)

                                                                                                                      agagCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCgg                                >  1:949224/1‑150 (MQ=255)

                                                                                                                       gagCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCggg                               <  2:1605535/150‑1 (MQ=255)

                                                                                                                           tCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATgc                           <  2:1057195/150‑1 (MQ=255)

                                                                                                                             aCCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATgcgc                         >  1:4426799/1‑150 (MQ=255)

                                                                                                                               cGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGt                       <  2:1523113/150‑1 (MQ=255)

                                                                                                                               cGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGt                       >  1:162878/1‑150 (MQ=255)

                                                                                                                               cGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGt                       <  2:342100/150‑1 (MQ=255)

                                                                                                                               cGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGt                       >  1:803089/1‑150 (MQ=255)

                                                                                                                                    tCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAgc                  >  2:522039/1‑150 (MQ=255)

                                                                                                                                      gacgaGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAgcgc                >  1:1160359/1‑150 (MQ=255)

                                                                                                                                      gacgaGCTCGTGCCAGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAgcgc                >  2:573153/1‑150 (MQ=255)

                                                                                                                                      gacgaGCTCGTGCCAGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAgcgc                >  2:2513599/1‑150 (MQ=255)

                                                                                                                                        cgaGCTCTGGCACGCGCTCGTCCTCTCCGGCATCGGCGGCGCGACGATCGCGCAGGCCAAAGAACCCCTGAGCCTGCGTGAGTTCAGGTCGTGGGAGAAGTACAGGCAGCTCCGGGGCTCGCTGCATGTCGGGATGCGCGTGGAgcgcgc              <  2:1241403/150‑1 (MQ=255)

                                                                                                                                            ctctGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAGCGCGCCACg          >  2:2829270/1‑150 (MQ=255)

                                                                                                                                               tGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAGCGCGCCACGGGc       <  1:1078173/150‑1 (MQ=255)

                                                                                                                                                ggCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAGCGCGCCACGGGcc      <  2:3900895/150‑1 (MQ=255)

                                                                                                                                                 gCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAGCGCGCCACGGGCct     >  1:829707/1‑150 (MQ=255)

                                                                                                                                                 gCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAGCGCGCCACGGGCct     >  2:1313830/1‑150 (MQ=255)

GACCCGGTTGAACTGGAGAAGGACCCGGAGAGCACCAAGCGCCTGGGATCTCTTGATGGCGACCTGTCCGTCGCGCTGCTGGTAGCTATTCGGGAGGTCAACGACCTGGGAAAGACGAAGAGCTCACCGAGCTCGACGAGCTCTGGCACGAGCTCGTCCTCTCCGGCATCGGCGGCTCGACGATCGCGCAGGCCAAAGAAAACCTGAGCCTGCGTGAGTTCAGGTCTTGGGAGAAGTACAGGCAGCTCCGTGGCTCGCTGCATGTCGGGATGCGCGTGGAGCGCGCCACGGGCCTGCT  >  NC_002947/1765142‑1765439

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`