| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,892,569 | T→C | 6.5% | intergenic (+37/‑58) | PP_1697 → / → PP_1698 | transcriptional regulator, GntR family/MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,892,569 | 0 | T | C | 6.5% | 643.4 / 22.0 | 201 | intergenic (+37/‑58) | PP_1697/PP_1698 | transcriptional regulator, GntR family/MFS transporter |
| Reads supporting (aligned to +/- strand): ref base T (77/111); new base C (8/5); total (85/116) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.28e-01 | |||||||||||
Only 100 of 207 total aligned reads displayed.
GCCCGGTGGTCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTGGAAGTGCA > NC_002947/1892420‑1892718 | gCCCGGTGGTCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGtgct > 1:128161/1‑150 (MQ=255) cccGGTGGTCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGtgctg < 2:4470146/150‑1 (MQ=255) ggtggtCGCGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCa < 2:502344/150‑1 (MQ=255) cGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGGCAGCACGgcgc < 2:706200/150‑1 (MQ=255) gATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGt < 1:1673116/150‑1 (MQ=255) tCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTgg > 1:417694/1‑150 (MQ=255) cGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGACTGCGCCGTGGCAGCACGGCGCAgacag < 2:2777522/150‑5 (MQ=255) gAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCt > 1:1128439/1‑150 (MQ=255) gAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCt > 1:595072/1‑150 (MQ=255) gcgcCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTc < 2:781261/150‑1 (MQ=255) gcgcCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTc < 2:186407/150‑1 (MQ=255) gcgcCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGGTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTc > 2:4316492/1‑150 (MQ=255) gcCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGc < 1:2779535/150‑1 (MQ=255) gcCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGc > 2:2706963/1‑150 (MQ=255) gcCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGc > 2:4388891/1‑150 (MQ=255) gCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGcc < 2:2961078/150‑1 (MQ=255) ccGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCg > 1:4034639/1‑150 (MQ=255) cgcgATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGt < 2:3684890/150‑1 (MQ=255) gATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTcac > 2:1532396/1‑150 (MQ=255) aTTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTcaca < 1:4419140/150‑1 (MQ=255) tACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACAcc < 2:112832/150‑1 (MQ=255) cGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCGTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCa < 1:291058/150‑1 (MQ=255) gCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCAc < 2:4167985/150‑1 (MQ=255) cGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCTGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGa > 2:892051/1‑150 (MQ=255) cGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGcc < 2:616766/113‑1 (MQ=255) ggCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGAc > 2:922020/1‑150 (MQ=255) gtaaaCCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACt > 2:456646/3‑150 (MQ=255) aCCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGaa < 2:4393793/150‑1 (MQ=255) aCCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGaa < 2:3454327/150‑1 (MQ=255) aCCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGaa < 1:1431545/150‑1 (MQ=255) aCCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGaa < 2:72157/150‑1 (MQ=255) tctGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGa < 1:1603863/150‑1 (MQ=255) tctGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGa > 2:3498491/1‑150 (MQ=255) tctGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGa < 1:2708042/150‑1 (MQ=255) gAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAAc > 2:2781663/1‑150 (MQ=255) gAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAAc < 1:191899/150‑1 (MQ=255) tGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAAt < 2:2559503/150‑1 (MQ=255) ccgcTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGt > 1:1839923/1‑150 (MQ=255) cgcTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGtt < 2:2663346/150‑1 (MQ=255) gcTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTc < 1:2724462/150‑1 (MQ=255) cTCGCGCGGCCATGCGCAACACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCa < 1:4513246/150‑1 (MQ=255) tCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAg < 1:1551015/150‑1 (MQ=255) cgcgcgGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGc < 2:3306997/150‑1 (MQ=255) ggCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTa > 1:2247570/1‑150 (MQ=255) aTGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATcgc < 1:1763964/150‑1 (MQ=255) gcgcAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCga < 2:3133674/150‑1 (MQ=255) gcgcAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCga < 2:1023999/150‑1 (MQ=255) cgcAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCgag < 1:2464645/150‑1 (MQ=255) cgcAGCACGTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCGTCACCCGTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACACTCATGTTCAGCTGGTATCGCgag < 2:170279/150‑1 (MQ=255) cagcaCTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGAt < 1:561257/150‑1 (MQ=255) agcaCTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATc > 1:1635133/1‑150 (MQ=255) agcaCTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATc > 1:3910486/1‑150 (MQ=255) agcaCTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCGTCACCTGTCTGCGCCGTGCTGCCACGGCGCCGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTCGCGCGAGATc > 2:1778395/1‑150 (MQ=255) cTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCt > 2:1554583/1‑150 (MQ=255) tCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCa > 1:1226912/1‑150 (MQ=255) gCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACgg < 2:2952653/150‑1 (MQ=255) aCCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGaa < 2:3260370/150‑1 (MQ=255) ccGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAAc < 2:3835535/150‑1 (MQ=255) ccGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAAc < 1:3814385/150‑1 (MQ=255) ccGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAAc > 2:3605559/1‑150 (MQ=255) aTCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCaa < 2:3148836/150‑1 (MQ=255) cGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGa < 2:484987/150‑1 (MQ=255) aCATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACa > 1:139217/1‑150 (MQ=255) aTTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACAtt < 1:1149625/150‑1 (MQ=255) ttCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGc > 1:2983529/1‑111 (MQ=255) gTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTgg < 1:3845370/150‑1 (MQ=255) gTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTgg > 2:2475885/1‑150 (MQ=255) gTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTgg < 2:1397762/150‑1 (MQ=255) aaCCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCt < 1:2520334/150‑1 (MQ=255) aaCCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCt < 1:4316492/150‑1 (MQ=255) aaCCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCt < 2:3639192/150‑1 (MQ=255) ccGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGt < 2:36890/150‑1 (MQ=255) gTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTc < 1:1692740/150‑1 (MQ=255) gCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTcggc < 1:3389112/150‑1 (MQ=255) ttcacccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTcggcgg > 2:2240912/1‑150 (MQ=255) cacccttccccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCt < 2:2357386/150‑1 (MQ=255) cacccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCt < 1:617430/150‑1 (MQ=255) cacccttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCt > 2:2047653/1‑150 (MQ=255) cttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTc < 1:4142705/150‑1 (MQ=255) cttcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTc > 2:32057/1‑150 (MQ=255) gtcaccGGTCGGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACCATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGACCGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCg < 2:1230257/149‑1 (MQ=255) tcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGc > 2:3733589/1‑150 (MQ=255) tcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCCGGGCCTGTTTCGGCGGCTGGTCGc < 2:1889938/150‑1 (MQ=255) tcaccTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCCGGGCCTGTTTCGGCGGCTGGTCGc < 2:4160116/150‑1 (MQ=255) acTGCGCCGTGGCAGCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCAc < 1:1589439/95‑1 (MQ=39) acTGCGCCGTGGCAGCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATgc > 1:659604/2‑150 (MQ=255) acTGCGCCGTGGCAGCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATgc > 1:3347301/2‑150 (MQ=255) acTGCGCCGTGGCAGCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATgc > 1:2578169/2‑150 (MQ=255) acTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATgc > 1:2925406/2‑150 (MQ=255) cTGCGCCGTGGCAGCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATgcg > 2:743083/1‑150 (MQ=255) tGCGCCGTGGCAGCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATgcgc > 2:834253/1‑150 (MQ=255) tGCGCCGTGGCAGCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACGAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATgcgc > 1:894778/1‑150 (MQ=255) tGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATgcgc < 1:1816608/150‑1 (MQ=255) gcgcCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCt > 1:2391517/1‑150 (MQ=255) gcgcCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACAGTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCt > 1:4257652/1‑150 (MQ=255) cgcCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTg > 1:1004198/1‑150 (MQ=255) ccGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTGGa < 1:1554583/150‑1 (MQ=255) cGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTGGaa < 2:4295650/150‑1 (MQ=255) tgctgcCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTGGAAGt < 2:4034639/150‑1 (MQ=255) ctgcCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCATGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTGGAAGTGc < 1:3558602/150‑1 (MQ=255) | GCCCGGTGGTCGTGATCGAGCGCCTGGCCCGCGATTACGCCGGCAAACCTCTGGAATGGCGCCGCTCGCGCGGCCATGCGCAGCACTTCCGCTACCGCATCGACATTCGTTAAACCGGTCGCTTCACCCTTCACCTGTCTGCGCCGTGCTGCCACGGCGCAGTGGCTTCGCCTGCCCGTCACACCCACGACTAGAAGGATAACAATCATGTTCAGCTGGTATCGCGAGATCACCTCACGGGAACGCAAGACATTCTGGGCCTGTTTCGGCGGCTGGTCGCTCGATGCGCTGGAAGTGCA > NC_002947/1892420‑1892718 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |