| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 244,785 | G→A | 8.5% | R154K (AGG→AAG) | algP → | transcriptional regulator AlgP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 244,785 | 0 | G | A | 8.5% | 378.1 / 16.8 | 140 | R154K (AGG→AAG) | algP | transcriptional regulator AlgP |
| Reads supporting (aligned to +/- strand): ref base G (59/68); new base A (7/5); total (67/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 145 total aligned reads displayed.
TCAAACGCGATGCTCAGGACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTG > NC_002947/244638‑244934 | tCAAACGCGATGCTCAGGACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAggg > 1:3397057/1‑150 (MQ=255)tCAAACGCGATGCTCAGGACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAggg > 2:3656610/1‑150 (MQ=255)tCAAACGCGAAGCTCAGGACAGCCTCAAGCTGGCTCAGGGGGGAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTCATCAACGTGCGGCCAAACCGGCAGCCAAGTCAACCGCTGCTGCCAAGCCTGCGGCCAAACCCGCAGCCAggg > 2:372757/1‑150 (MQ=38) aaaCGCGATGCTCAGGACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCg > 2:1799857/1‑150 (MQ=255) aaaCGCGATGCTCAGGACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCg > 1:2298112/1‑150 (MQ=255) aaaCGCGATGCTCAGGACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCg > 1:187556/1‑150 (MQ=255) aaaCGCGATGCTCAGGACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCg > 1:966384/1‑150 (MQ=255) aCGCGATGCTCAGGACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGAc < 2:39465/150‑1 (MQ=255) aCGCGATGCTCAGGACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGAc < 1:1584244/150‑1 (MQ=255) aCGCGATGCTCAGGACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCACTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGAc < 2:4279976/150‑1 (MQ=255) cgcgATGCTCAGGACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGAcc < 2:3590029/150‑1 (MQ=255) gATGCTCAGGACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCTATCCAGCTGCCATGGCGACCGCt > 2:4520112/1‑150 (MQ=255) tCAGGACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTgccgc > 1:3785861/1‑150 (MQ=255) tCAGGACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTgccgc < 2:870300/150‑1 (MQ=255) gACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAg > 1:1554709/1‑150 (MQ=255) gCCTCAATCTGGCTCAGGGTGTAGTTAAAGTACGCGAAGCTGCAGTCAAGTAACTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCCCTTCTGCCAAGCCTTCGGCAAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTg < 2:4369513/150‑1 (MQ=25) cTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCg < 1:3694209/150‑1 (MQ=255) cTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCg < 2:2569244/150‑1 (MQ=255) cTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCg < 2:2485742/150‑1 (MQ=255) cTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCg < 1:4002652/150‑1 (MQ=255) gCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCaa > 1:1493901/1‑150 (MQ=255) gCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCaa < 1:1056217/150‑1 (MQ=255) gCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTCCCGCCAAGCCTGCGGCCaa > 1:2205863/1‑150 (MQ=255) tGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAAc > 1:3231096/1‑150 (MQ=255) ggCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAAcc < 2:1432898/150‑1 (MQ=255) ggCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAAcc < 2:1432908/150‑1 (MQ=255) cTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCACTGCCGCCAAGCCTGCGGCCAAAccgg < 2:4346231/150‑3 (MQ=255) tCAGTGTGGAGGTTAAGTACGCGAAGCTGCAGGCAAGGCCGGTGAGCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGc < 2:3230977/150‑1 (MQ=17) tCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGc > 2:3176167/1‑150 (MQ=255) tCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGc > 2:2422685/1‑150 (MQ=255) cAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCt < 2:3936481/150‑1 (MQ=255) tgtAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCaa < 2:1075081/150‑1 (MQ=255) tgtAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCaa < 2:3105513/150‑1 (MQ=255) tAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAga < 2:1397689/150‑1 (MQ=255) gTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAgacga < 1:4332998/150‑1 (MQ=255) gTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAgacga > 2:3300823/1‑150 (MQ=255) gTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAgacga > 1:1582854/1‑150 (MQ=255) aaGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCa < 1:1128171/150‑1 (MQ=255) tACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTg > 1:903083/1‑150 (MQ=255) gcgAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCCGCTGCCAAGACGACCACTgccg > 1:2442352/1‑150 (MQ=255) gcgAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTgccg > 1:1454299/1‑150 (MQ=255) gcgAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTgccg > 1:4451737/1‑150 (MQ=255) gcgAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTgccg > 1:1563087/1‑150 (MQ=255) gAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAACCCAGCTGCCAAGACGACCGCTgccgcc > 1:3434286/1‑150 (MQ=255) aGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCaa < 1:522593/150‑1 (MQ=255) aGCTGCAGGCAAGGCCCGTGATCACCGTGCGGCCCAACCGGCAGCCTAGGGAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCaa < 2:1513121/150‑1 (MQ=18) cAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGTCGTCCGCTGCCGCCACGCCTg > 1:4293554/1‑150 (MQ=255) cAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCGCTCCCGCAAAGCCTGCGGCCAAACCCGCTGCCAAGACGAAAGCTCACGCCAATCCTg > 1:3273011/1‑150 (MQ=17) aGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGc > 1:3973842/1‑150 (MQ=255) gCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGTCACCTGACGCCAAGCCTGAgg > 1:3933931/1‑150 (MQ=17) ccTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAAcc > 1:3016071/1‑150 (MQ=255) ccTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCAGCCAAAcc > 1:1343254/1‑150 (MQ=255) ccTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCGCTGCCGCTAAg < 1:935719/94‑1 (MQ=255) ccTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCGCTGCCGCTAAg > 2:935719/1‑94 (MQ=255) cTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCg < 1:1534104/150‑1 (MQ=255) tGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGc < 2:3154361/150‑1 (MQ=255) gATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCt < 1:1068713/150‑1 (MQ=255) gATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCGc > 1:961158/1‑80 (MQ=255) tCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGc < 2:60620/150‑1 (MQ=255) tCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGc < 1:1322612/150‑1 (MQ=255) aCGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCaa > 1:2003655/1‑150 (MQ=255) cGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAg < 1:1646124/150‑1 (MQ=255) gTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAATCCGGCTGCCAATACTACCACTGCCGCCAAGCCTGAGGCCAAACCGGCTGCCAAgg > 1:2818515/1‑150 (MQ=14) ccAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCAGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCg > 1:714830/1‑150 (MQ=255) cAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGc > 2:103574/1‑150 (MQ=255) aaaCCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCACGCCTGCGGCCAAACCAGCTGCCAAGACGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCt > 2:3469335/1‑150 (MQ=255) aaaCCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCt < 1:3459609/150‑1 (MQ=255) aCCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTgc < 2:1084678/150‑1 (MQ=255) aCCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTgc < 1:568662/150‑1 (MQ=255) ccGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTgcc < 2:3457433/150‑1 (MQ=255) ccGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTgcc < 1:243123/150‑1 (MQ=255) cGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCGGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCGCt > 2:21443/1‑104 (MQ=255) aGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCaa > 1:760803/1‑150 (MQ=255) ccAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAAc > 1:3350657/1‑150 (MQ=255) ccAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAg < 2:3350737/89‑1 (MQ=255) cAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCTACCGCTGCCGCCAAGCCTGCGGACAAAACCGCTGCCCAGGCGACCACTGCCGCCAAGCCTCCGGCCACACCGGCTGCCAGGGCGGCCGCTcccgccccacc > 1:2374280/1‑145 (MQ=14) cAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTg < 1:1852362/83‑1 (MQ=255) aaGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCt > 2:2169232/1‑150 (MQ=255) gCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCg < 2:2298112/150‑1 (MQ=255) gCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCg < 1:3171388/150‑1 (MQ=255) aaCCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAACCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGc > 1:1986494/1‑150 (MQ=11) aaCCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCACTGCCGCGCAGCCTGCGGCCCACCCGGCTGCCAGGGCGAGCGCGGCCGCCCACCCTGCGGc > 1:3598683/1‑150 (MQ=14) aaCCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGGCTGCGGCAGCCAAACCTGc > 2:1591452/1‑147 (MQ=255) aCCGCTGCTGCCAAGCCTGCGGCTAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCCGCTGCCAAGTCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCAAATCCTGCGGcc > 1:3823424/1‑150 (MQ=11) gctgcCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCg < 2:131139/150‑1 (MQ=255) gcCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCCCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCt < 2:1493901/150‑1 (MQ=255) aGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGTCGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCa < 2:4040837/150‑1 (MQ=255) ccTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAg > 1:3393328/1‑150 (MQ=255) ccTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAg < 2:3168899/150‑1 (MQ=255) ccTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAg < 1:354609/150‑1 (MQ=255) gCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGAcc < 1:3166447/150‑1 (MQ=255) cAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGAACCCTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGc > 1:1656797/1‑150 (MQ=255) aaaCCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCt > 1:2255752/1‑150 (MQ=255) tGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCTaa < 1:2169232/150‑1 (MQ=255) tGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCaa < 1:2884681/150‑1 (MQ=255) tGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCaa < 1:3789317/150‑1 (MQ=255) ccAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACTGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGc < 1:3248692/150‑1 (MQ=255) ccAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGc < 1:126785/150‑1 (MQ=255) aGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCATCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCt > 1:1265491/1‑150 (MQ=255) gggCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGGCGACCGCTGCCGCCAAGCCTGCGGCCACGCCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAGCCGGCTGCCAAGGCGGCCGCTGCCGCCAGGCCTg > 2:17508/1‑150 (MQ=11) | TCAAACGCGATGCTCAGGACAGCCTCAAGCTGGCTCAGGGTGTAGGTAAAGTACGCGAAGCTGCAGGCAAGGCCCTTGATCAACGTGCGGCCAAACCGGCAGCCAAGGCAACCGCTGCTGCCAAGCCTGCGGCCAAACCAGCTGCCAGGGCGACCGCTGCCGCCAAGCCTGCGGCCAAACCAGCTGCCAAGACGACCACTGCCGCCAAGCCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAACCTGCGGCCAAACCGGCTGCCAAGGCGACCGCTGCCGCCAAGCCTG > NC_002947/244638‑244934 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |