Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,070,117 A→T 8.1% intergenic (‑97/+24) plsC ← / ← PP_1845 1‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,070,1170AT 8.1% 669.8 / 33.6 208intergenic (‑97/+24)plsC/PP_18451‑acyl‑sn‑glycerol‑3‑phosphate acyltransferase/enoyl‑CoA hydratase/isomerase family protein
Reads supporting (aligned to +/- strand):  ref base A (97/94);  new base T (8/9);  total (105/103)
Fisher's exact test for biased strand distribution p-value = 8.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 213 total aligned reads displayed.

CCAACGGCAAGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTCCCGCGCTGCG  >  NC_002947/2069968‑2070264
                                                                                                                                                       |                                                                                                                                                   
ccAACGGCAAGAAAATGCAGCCCCAGCAGGAGCATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCaa                                                                                                                                                     <  1:2815848/150‑1 (MQ=255)
ccAACGGCAAGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCaa                                                                                                                                                     >  2:2815869/1‑150 (MQ=255)
ccAACGGCAAGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCaa                                                                                                                                                     <  1:2815842/150‑1 (MQ=255)
 cAACGGCAAGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAg                                                                                                                                                    >  2:1977284/1‑150 (MQ=255)
      gCAAGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCcgc                                                                                                                                               <  1:4294950/150‑1 (MQ=255)
       cAAGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCcgcg                                                                                                                                              >  1:2733558/1‑150 (MQ=255)
       cAAGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCcgcg                                                                                                                                              >  1:1815591/1‑150 (MQ=255)
          gAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCTTGCCCGCGaaa                                                                                                                                           <  2:667326/150‑1 (MQ=255)
          gAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGaaa                                                                                                                                           >  2:2679996/1‑150 (MQ=255)
          gAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGaaa                                                                                                                                           >  1:2049831/1‑150 (MQ=255)
           aaaaTGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGaaaa                                                                                                                                          <  1:600095/150‑1 (MQ=255)
           aaaaTGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTAGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGaaaa                                                                                                                                          <  1:4215860/150‑1 (MQ=255)
            aaaTGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACTCCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAg                                                                                                                                         <  2:4088752/150‑1 (MQ=255)
            aaaTGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTTCGCGGGCTTGCCCGCGaaag                                                                                                                                          <  1:3432068/150‑2 (MQ=255)
             aaTGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCCTTTCGCGGGCAAGCCCGCGAAAAg                                                                                                                                         <  1:1338759/150‑1 (MQ=255)
             aaTGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCCTTTCGCGGGCAAGCCCGCGAAAAg                                                                                                                                         <  1:1338329/150‑1 (MQ=255)
             aaTGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAgg                                                                                                                                        <  1:1953411/150‑1 (MQ=255)
               tGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTTCGCGGGCTTGCCCGCGAAAgggc                                                                                                                                       <  1:1384325/150‑2 (MQ=255)
                gCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTTCGCGGGCTTGCCCGCGAAAGGGcc                                                                                                                                     <  1:3747460/150‑1 (MQ=255)
                   gCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAGGGccgtaa                                                                                                                                 <  2:864507/150‑5 (MQ=255)
                    ccccAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTg                                                                                                                                 >  1:3136210/1‑150 (MQ=255)
                     cccAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCCAGCCCGCGAAAAGGGCCCGTGc                                                                                                                                >  1:1227501/1‑150 (MQ=255)
                      ccAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCg                                                                                                                               >  2:1570880/1‑150 (MQ=255)
                      ccAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCg                                                                                                                               >  1:1047773/1‑150 (MQ=255)
                           agGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAg                                                                                                                          <  1:77085/150‑1 (MQ=255)
                            ggAACATACGCAATGAATAAAGCATGGTACGACTCACCCCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGc                                                                                                                         <  1:3708776/150‑1 (MQ=255)
                                  tACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAatat                                                                                                                   >  2:2465536/1‑150 (MQ=255)
                                   aCGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATAtg                                                                                                                  >  2:3856742/1‑150 (MQ=255)
                                     gCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATAtgct                                                                                                                <  1:117385/150‑1 (MQ=255)
                                     gCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATAtgct                                                                                                                >  2:1032704/1‑150 (MQ=255)
                                     gCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATAtgct                                                                                                                >  1:2640118/1‑150 (MQ=255)
                                      cAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATAtgctg                                                                                                               <  2:3884422/150‑1 (MQ=255)
                                      cAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATAtgctg                                                                                                               <  2:1491421/150‑1 (MQ=255)
                                      cAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCAAGCCAATAagctg                                                                                                               >  1:4133851/1‑150 (MQ=255)
                                      cAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCAATGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATAtgctg                                                                                                               <  1:2007314/150‑1 (MQ=255)
                                         tGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCGTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGGCAATATGctgctg                                                                                                            >  2:753741/1‑150 (MQ=255)
                                           aaTAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGAt                                                                                                          >  2:1412846/1‑150 (MQ=255)
                                                  cATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTc                                                                                                   <  2:561406/150‑1 (MQ=255)
                                                  cATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTc                                                                                                   <  2:169051/150‑1 (MQ=255)
                                                   ccggTACGACGCACACCAGACGGTCGCGGGGCAGCGTACGGGCGCGCACTGGCTGGGGCAACCCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCg                                                                                                  <  1:3338543/148‑1 (MQ=255)
                                                      gTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATc                                                                                               <  2:3472517/150‑1 (MQ=255)
                                                         cGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGcc                                                                                            <  1:3651402/150‑1 (MQ=255)
                                                           aCTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCtt                                                                                          >  1:3218539/1‑150 (MQ=255)
                                                           aCTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCtt                                                                                          <  2:3578228/150‑1 (MQ=255)
                                                            cTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATAGCCTTg                                                                                         >  1:1758359/1‑150 (MQ=255)
                                                             tCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGt                                                                                        >  2:3208822/1‑150 (MQ=255)
                                                             tCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGt                                                                                        >  2:939725/1‑150 (MQ=255)
                                                               acacCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTcc                                                                                      >  1:2431436/1‑150 (MQ=255)
                                                                 acCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAg                                                                                    >  1:4405339/1‑150 (MQ=255)
                                                                  ccAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAgc                                                                                   <  1:4519659/150‑1 (MQ=255)
                                                                   cAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAgcg                                                                                  >  1:2895482/1‑150 (MQ=255)
                                                                         gTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCca                                                                            <  2:1047773/150‑1 (MQ=255)
                                                                             cgGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCcagcag                                                                        <  2:2968103/150‑1 (MQ=255)
                                                                             cgGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCACTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCcagcag                                                                        <  1:3812315/150‑1 (MQ=255)
                                                                                   aGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCttt                                                                  <  1:3321275/150‑1 (MQ=255)
                                                                                   aGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCttt                                                                  <  2:834571/150‑1 (MQ=255)
                                                                                     tgtACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGTTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTgc                                                                <  2:279132/150‑1 (MQ=255)
                                                                                     tgtACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTgc                                                                <  1:1570880/150‑1 (MQ=255)
                                                                                      gtACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCCTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTgcg                                                               <  2:1192949/150‑1 (MQ=255)
                                                                                         cGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCAc                                                            <  1:3953527/150‑1 (MQ=255)
                                                                                           ggTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACtt                                                          >  2:2141567/1‑150 (MQ=255)
                                                                                                  aCTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCtt                                                   <  2:2167831/150‑1 (MQ=255)
                                                                                                   ctggctggGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTg                                                  <  2:3946287/150‑1 (MQ=255)
                                                                                                    tggctggGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTgg                                                 >  2:498447/1‑150 (MQ=255)
                                                                                                      gctggGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCCATATGCTGCTGATCCAGCGCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCGTTGCGCACTTTCAGCTTGgtg                                               >  1:903900/1‑150 (MQ=255)
                                                                                                       ctggGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGgtgt                                              >  1:3679451/1‑150 (MQ=255)
                                                                                                           ggCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCtt                                          <  1:1471270/150‑1 (MQ=255)
                                                                                                            gCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTtg                                         >  1:3105196/1‑150 (MQ=255)
                                                                                                            gCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTtg                                         >  2:3379117/1‑150 (MQ=255)
                                                                                                             cAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTtgt                                        <  1:3047216/150‑1 (MQ=255)
                                                                                                              aaaCCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTtgtg                                       <  2:3908030/150‑1 (MQ=255)
                                                                                                                  cTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGcc                                   >  2:1075761/1‑150 (MQ=255)
                                                                                                                   ttGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCa                                  <  2:3786149/150‑1 (MQ=255)
                                                                                                                   ttGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCa                                  >  2:3974082/1‑150 (MQ=255)
                                                                                                                   ttGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCa                                  <  2:1509251/150‑1 (MQ=255)
                                                                                                                       tGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCAt                              <  1:1846825/150‑1 (MQ=255)
                                                                                                                          aGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGtt                           <  2:2713992/150‑1 (MQ=255)
                                                                                                                          aGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTGGGTGTTCTTGTGCGCCAGCATGta                           >  2:1964957/1‑149 (MQ=255)
                                                                                                                           ggCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCGATTATGGTGCTGATCCAGCTGGATCGGCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGGTTGGGGTGGGTGTGCGCCAGctggtgc                          >  2:2725819/1‑144 (MQ=255)
                                                                                                                           ggCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTc                          >  2:2362304/1‑150 (MQ=255)
                                                                                                                            gCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTTCTGATCCAGCTCGATCGCCATGTCCAGCGACTCCAGCAGCCCTTTGCGCACTTTCAGCTAGGTGTTCTTGTGCGCCAGCATGTTCa                         >  2:3554080/1‑150 (MQ=255)
                                                                                                                            gCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCGTGTCCAGCGCCTCCAGCAGCCCGTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCa                         >  1:3862915/1‑150 (MQ=255)
                                                                                                                              cTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGc                       <  2:3336081/150‑1 (MQ=255)
                                                                                                                                 ttACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGcttc                    <  2:3139514/150‑1 (MQ=255)
                                                                                                                                     ggCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCa                <  2:3800672/150‑1 (MQ=255)
                                                                                                                                       gcccttttCGCGGGCTTGCCCGCGAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAg               >  2:2855339/6‑150 (MQ=255)
                                                                                                                                         ccttttCGCGGGCTTGCCCGCGAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCt             >  2:2595936/4‑150 (MQ=255)
                                                                                                                                          cttttCGCGGGCTTGCCCGCGAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTc            >  1:2581183/3‑150 (MQ=255)
                                                                                                                                          cTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTc            >  2:1719421/1‑150 (MQ=255)
                                                                                                                                           ttttCGCGGGCTTGCCCGCGAAAGGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTAGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTc            >  1:998398/2‑150 (MQ=255)
                                                                                                                                            tttCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTcc           >  1:260421/1‑150 (MQ=255)
                                                                                                                                            tttCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTcc           >  1:217870/1‑150 (MQ=255)
                                                                                                                                            tttCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTcc           >  2:1824788/1‑150 (MQ=255)
                                                                                                                                             ttCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTccc          >  1:1003026/1‑150 (MQ=255)
                                                                                                                                              tCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTCCcg         <  2:2485873/150‑1 (MQ=255)
                                                                                                                                                gcgGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTCCcgcg       >  2:1879344/1‑150 (MQ=255)
                                                                                                                                                  gggCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTCCCGCGCt     >  2:2205796/1‑150 (MQ=255)
                                                                                                                                                    gCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTCCCGCGCTGc   >  1:300268/1‑150 (MQ=255)
                                                                                                                                                    gCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTCCCGCGCTGc   >  1:3519036/1‑150 (MQ=255)
                                                                                                                                                     cAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTCCCGCGCTGCg  >  2:3432957/1‑150 (MQ=255)
                                                                                                                                                       |                                                                                                                                                   
CCAACGGCAAGAAAATGCAGCCCCAGCAGGAACATACGCAATGAATAAAGCATGGTACGACTCACACCAGACGGTCGCGGGGCAGTGTACGGGTGTGCACTGGCTGGGGCAAACCTTGGTGCAGGCCTGTTACGGCCCTTTCGCGGGCAAGCCCGCGAAAAGGGCCCGTGCGGCTAGCCAATATGCTGCTGATCCAGCTCGATCGCCTTGTCCAGCGCCTCCAGCAGCCCTTTGCGCACTTTCAGCTTGGTGTTCTTGTGCGCCAGCATGTTCAGCTTCTTCAGCTCCCGCGCTGCG  >  NC_002947/2069968‑2070264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: