| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,080,228 | A→C | 14.8% | intergenic (+48/+67) | PP_1853 → / ← PP_1854 | LysR family transcriptional regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,080,228 | 0 | A | C | 14.8% | 255.5 / 5.5 | 127 | intergenic (+48/+67) | PP_1853/PP_1854 | LysR family transcriptional regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (54/45); new base C (9/13); total (63/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 137 total aligned reads displayed.
AAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCA > NC_002947/2080079‑2080377 | aaGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCcaca > 2:3825585/1‑150 (MQ=255)aaGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCcaca > 2:2607526/1‑150 (MQ=255)aaGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCcaca < 1:360225/150‑1 (MQ=255)aaGCGGTTGCCGGGCAAGACCCGGGCGTTCAGCGATTTTGGGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCCCCCCcaca > 2:3355108/1‑150 (MQ=255) aGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAg < 2:400436/150‑1 (MQ=255) gCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAgg < 1:1716969/150‑1 (MQ=255) tGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGa > 2:961022/1‑150 (MQ=255) tGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGa > 2:3648397/1‑150 (MQ=255) tGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGa < 1:4013713/150‑1 (MQ=255) tGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCGTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGGCCGCCCCCACCCACAcggg > 1:1174274/1‑149 (MQ=255) ttGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTGTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCCCCgggcgt > 1:3339007/1‑147 (MQ=255) ttGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGGTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAAATATTGCCAGTGCCGGCCGTTTCGCGGGCCCGCCCGCCCCCCCCGGGaga > 1:3106887/1‑148 (MQ=255) tGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGatat < 2:562779/150‑1 (MQ=255) gCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGGCCCCCCCCCCCCACAGGGATATc > 1:3207234/1‑150 (MQ=255) tgggCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATAacac > 2:3023979/2‑150 (MQ=255) cGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCCGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATcac > 2:1207492/1‑150 (MQ=255) cGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATcac > 2:1418525/1‑150 (MQ=255) gggCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATcaca < 2:183999/150‑1 (MQ=255) gggCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATcaca < 2:717867/150‑1 (MQ=255) gggCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATcaca < 2:717637/150‑1 (MQ=255) gggCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCAGGCCCGCCCGCACCCACAGGGATATcaca < 2:279682/150‑1 (MQ=255) ggCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAg < 1:2426505/150‑1 (MQ=255) ggCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAg < 1:3932353/150‑1 (MQ=255) cccGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa < 2:513488/150‑1 (MQ=255) cccGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGaa < 1:961022/150‑1 (MQ=255) ggCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACa < 1:3566483/150‑1 (MQ=255) gTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTg < 2:1212701/150‑1 (MQ=255) tCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACCGGGATATCACAGCCATGAAGACAGTggg < 2:4145000/150‑1 (MQ=255) tCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCAAAGCCCTGAAGAAAGTggg > 2:530926/1‑150 (MQ=255) aTCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCATGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACCCGGATAAAAAAGCCCACAAGACAGTGGGGt > 2:59293/1‑150 (MQ=255) tCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTc > 2:4451289/1‑150 (MQ=255) cGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTcc < 1:2694203/150‑1 (MQ=255) ttttGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTtg < 1:2527953/150‑1 (MQ=255) tttGTGGTGGAGAAGTATGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAAATATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCAGCACCCACAGGGATATCACACCCCTGAAGACAGAGGGGTCCTtgt > 2:3734241/1‑150 (MQ=255) tgtgGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTgg < 1:3801866/150‑1 (MQ=255) tgtgGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTgg < 1:1604412/150‑1 (MQ=255) gCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCCCCCGCGCCCACAGGGATTACAAAGCCCGGAACACCGGGGGGTCCTAGGGGGAgcggggg > 1:3454526/1‑148 (MQ=255) gCAGTGTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTAGTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcg < 2:4064300/150‑1 (MQ=255) cAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgg < 2:2956531/150‑1 (MQ=255) cAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgg < 2:4324752/150‑1 (MQ=255) cAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgg < 1:1431810/150‑1 (MQ=255) gTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCCCAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGgggcgggcgggc > 2:403896/1‑150 (MQ=255) tttGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACCGGGCTATCACAGCCCTGAAGACCGTGGGGTCCGGGGGGGAGCGGGCGGGcc > 2:3234739/1‑150 (MQ=255) tttGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGcc > 2:3927837/1‑150 (MQ=255) tGCCGAGCAGTGGCTGGCGGGGCGTTTCGATGCCATGAAGGCACTTTATAGAATTTTTGCCTGTGCCGGCCTTTTCGCGTGCCCGCCCGAACCCACAGGGATATCAAATAACTGAAGAAAGTGGGGTCCTTGTGGGAGAGGGCGGGCCcg < 1:4514035/150‑1 (MQ=255) gAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCCGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCCCCGGGATAACACAGCCCTCAAGACCGTGGGGGGCGGGGGGGTGCGGGCGGGGCcgcggc > 1:4375249/1‑148 (MQ=255) gAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGAGATCACAGCCCTGAAGACAGTTGGGTCCGTGTGGGGGCGGGCGGGCCCGCGac > 1:4375259/1‑149 (MQ=255) ctggggCTGGCGGGGCGGTTCGCTGCCCTGCAGGCCCTTTAGAGATTTAGGGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAagag < 2:2486608/148‑1 (MQ=255) ggggCTGGGGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGATATTTATTGCCTGTGCCGGCCTTTTGGGGGGCCCGCCCGCACCCACTGGGATATCACAGCCCTTAAGACAGTGGGGTCCTTGTGGCAGCGGGCGGGCCCGCGAAGAGGc < 2:940403/150‑1 (MQ=255) ggcgggcgGGGCCGTGCGAGGCCCTGCCGGCCCTTTAGAGCCTCAGGGCCTGTGCCGGCCTCTTCGCGGGCCCGCCCGCACCCACAGGCAGATCACAGCCCTGAAGACAGTGGGGGCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCg < 2:4104313/150‑1 (MQ=37) ggCTGGCGGGGCGGTTCGCGGCCCGGCAGGCCCTTTCGCGAATTTGGGCCTGTGCCGGCCTTTGGGCGGGCCCGCCCGCACCCACCGGGATATCCCCGCCCTGAAGACCGTGGGGGCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCg < 2:3869798/150‑1 (MQ=255) gattGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCCCCGGGATATCCCCGCCCTGAAGACAGTGGGGTCCGGGGGGGAGCGGGCGGGCCCGCGAAGAGGCCg > 2:488960/4‑150 (MQ=255) agatGGCGGGGCGGTTAGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCAGCACCCACCGGGAGAGCCCCGCCCTGCAGGCCGGGGGGAGCGGGGGGGGGCGGGCGGGCGCGCGGAGAGGcgg > 2:4212637/4‑148 (MQ=255) ggggcggTTCGTGGCCCTGCAGCCCATTTAGCCACTTCTTGCCTGGGCCGGCCTTTACGCGGGCCCGCCCGCACCCACCGGTATATCACCGCCCTGAAGCCTGTGGGGTCCTTGGGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGa < 2:1650428/150‑1 (MQ=255) ggggcggTTCGAGCCCCTGCCGGCCCTTTAGAGAATTATTGCCTGGGCCGGCCTTTGCGCGGGCCCGCCCGCACCCACAGGTATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGa < 2:1650506/150‑1 (MQ=255) cgttGCGCTGCTGGCTCTTTAGAGATTTTTTGCCTGTGCCGGCCTTTTCGGGGGCCGGCCCGCACCCACAGGTATTTCACTGCCCTGACGACATTGGTGTCCTTGTGGGAGGGGGCGGGCCCGCGAAGAGGCCGGTTCTGACAACATCGa < 2:220195/147‑1 (MQ=255) gATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCCCACCCACAGGGATATCACAGCCCAGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCCAAGAGGCCGGTTAAGacaaaaaagac > 2:1628284/1‑143 (MQ=255) tGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGCTATCACAGCCCAGAAGACACTGGGGTCCGTGTGGGGGCGGGGGGGCCCGCGCCGCGGCCCGGTCCGGCCACAACGACaa > 1:4353871/1‑150 (MQ=255) ccTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCAACCACAGGGATTTAACAGCCCTTAATACAGTTGGGTGCTTGTGGGAGCGGGCGGGGCCGGGTAGAGGCCGGTTGAGACAAAATAGACAATGa > 1:1477950/1‑150 (MQ=255) ggCCCTTTTGTTATTTTTTGCCTGGGCCGGCCTTTTGGCGGGCCCGCCCGCACCCACCGGGATATCCCAGCCCTGAAGACTGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATa < 2:904098/150‑1 (MQ=255) ggCCCTTTTGAGAATTAGTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATa < 2:3607921/150‑1 (MQ=255) gCCCTTTAGAGAATTATTGCGTGTGCCGGCCTTTTCGCGGGCCCGGCCGGACCCACAGGGTTATCAGAGCCCTGTAGAGAGTGGGGTGGTTGTGGGAGGGGGGGGGGGCGGGGAGTGGCGGGTTGAGACAACATGGTCAATGTAGGATAc > 2:3490345/1‑150 (MQ=255) tAGACAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCCCCGGGATATCACCGCCCTTAAGACAGTGGGGTCCTTGTGGGCGGGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTgc < 2:3169860/150‑1 (MQ=255) gagaATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCGGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAACAGGCCGGTTCAGACAACATCGACACAGAACGATACCTGTgcgc > 2:3343784/1‑150 (MQ=255) atttctggCCTGTGCGGGCCTTTTCGCGGGCCCGCCCGCACCCCCCGGGATACCACCGCCCTGAAGACATTGGGGTCCTTGTGGGAGCGGGGGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCa < 2:3389861/143‑1 (MQ=255) ttttttGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAg < 2:2339148/146‑1 (MQ=255) tattGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCAAAGCGAAAACACCCCCCAGAACACACAGGGGTACGTGGGGGAGCCGGCCGGCCCGCGAAGAGCCCGCTTAACAAAACATCGAAAAAGAACCATAACAGTGCGCCCAggg > 2:4262882/1‑149 (MQ=255) ttGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACCGTGGGGTCCGTGTGGGAGCGGGCGGGCCCGCGCACAGGCCGGTTCAGCCAACATCGACCATGCACCATACCTGTGCGCCCAGGTGc > 2:2890579/1‑150 (MQ=255) gtGCCGGGGCCGGCCTGTGCGCGGGCCCGCCCGCACCCACCGGCATAACCCCGCCCTGATCCCCGTGGGGTCCTTGTGGGCGGGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGc < 1:273288/149‑1 (MQ=255) gCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATAACACAGCCCTGAAGACCGGGGGGTGCTGGTGGGAGCGGGCGGGCCCGCGCCGCGGCCGGGTCGGCCCCCCGCGACCCTGAACGATACCGGTGCGCCCCGGTggcc > 2:3536523/1‑147 (MQ=255) ccTGTGCCGGCCTTTTCGCGGGCCCGCCCCCACCCACAGGGATATCACAGCCCGGAAGCCAGGGGGGGCCGTGGGGGGGCGGGCGGGCCCCCGCAGAGGCCGGTGCCGACAACAGCGACCAAGAACGATACCGGTGCGCCCCGGGGcccc > 2:3800528/1‑150 (MQ=255) gtgCCGGCCTTTTCGCGGGCCCGCCCCCCCCCACACGGATATCACAGCCCAGAAGACCGTGGGGTCCTTGGGGGAGCGGGCGGGCCCGCGAAGAGGCCGGGTCAGACAACATCGACAAAGAAAGATACCAGTGCGCCCCGGGGCACCACg > 2:514571/1‑150 (MQ=255) cGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGGTATCACAGCCCTGAAGACAGTGGGGTCCTGGTGGGAGCGGGCGGGCCCGCGCAGAGGCCGGTTCAGACAACATCGACAAAGAACGATACCTGTGCGCCCCGGGGCCCCTCGTCAt > 2:2368952/1‑150 (MQ=255) cGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGGCAt > 2:4489378/1‑150 (MQ=255) cGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCGTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAAAGAACGATACCTGTGCGCCCAGGTGCACCTCGTCAt > 2:839778/1‑150 (MQ=255) cTTCTCGCGGGCCCGCCCGCACCCACAGGGAAAACACAGCCCTCACCACCGTGGGGCCCTTGTGGGAGCGGGGGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCAc < 1:1158258/150‑1 (MQ=255) ttttCGCGGGCCCGCCCCCACCCCCAGGGATATCACAGCCCAGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGCAGAGGCCGGTTCAGACAACATAGACAATGAACGATACCTGTGCGCCCAGGTGCACCACGTCAaccacc > 2:202435/1‑150 (MQ=255) ttCGCGGGCCCGCCCGCACCCACAGGGATATAACAGCCCTGAAGACAGTGGGGTCCGTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAAAGAACGATACCAGTGCGCCCAGGTGCACCTCGTCATCCACCCg > 2:56964/1‑150 (MQ=255) cgGGCCCGCCCGCACCCACTGGGATATAACAGCCCTGAAGACTGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTg < 2:3188589/150‑1 (MQ=255) cgGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACCGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTg < 2:618448/150‑1 (MQ=255) cgGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTg > 2:4129555/1‑150 (MQ=255) gggCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGc > 1:1907093/1‑150 (MQ=255) ggccggccGGCACCCCCTGGTATATCACCGCCCTGTTGAGTGGGGGGTGTTTGGGGGGGGGGGGGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGcc < 1:3848095/150‑1 (MQ=255) ggCCCGCCCGCCCCCCCTGGGATACCCCCGCCCTGACGACGGGGGGGTCGTGGGGGGGGGGGGGGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGcc < 1:948917/150‑1 (MQ=255) ggCCCGCCCGCACCCACTGGTATATCACACCCGTTAAGCCTGGGGGGGCGTTGTGGGCGGGGGGGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGcc < 1:2786811/150‑1 (MQ=255) cccgcccgCACCCACCGGGATATCACAGCCCTGATGACAGTGGGGTCCTTGTGGGCGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCca < 2:391155/150‑1 (MQ=255) cccgcccgCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTtgt < 1:555565/52‑1 (MQ=255) cccgcccgCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTtgt > 2:555565/1‑52 (MQ=255) cccgcccgCACCCACAGCGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCca > 2:1237119/1‑150 (MQ=255) gcccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATc < 1:806177/133‑1 (MQ=255) gcccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATc > 2:806177/1‑133 (MQ=255) ccgcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGt > 1:1556368/1‑150 (MQ=255) gcACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTtg > 2:1389083/1‑150 (MQ=255) cccACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTtgctg < 2:2286939/150‑1 (MQ=255) cccACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTtgctg < 2:2286911/150‑1 (MQ=255) ccACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTtgctgc > 1:3000511/1‑150 (MQ=255) ccACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTtgctgc > 2:1716541/1‑150 (MQ=255) ccaGGGATATCACAGCCCTGAAGACCGGGGGGTCCTGGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGccc < 2:1626094/149‑1 (MQ=255) acaGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGccc > 1:182605/1‑150 (MQ=255) acaGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGccc > 2:159587/1‑150 (MQ=255) | AAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACCCGCTTGCCCAGCAGTTGCTGCCCCA > NC_002947/2080079‑2080377 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |