| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,089,298 | C→G | 7.6% | intergenic (+146/+772) | PP_1865 → / ← aroH | transposase/3‑deoxy‑7‑phosphoheptulonate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,089,298 | 0 | C | G | 7.6% | 501.5 / 26.9 | 159 | intergenic (+146/+772) | PP_1865/aroH | transposase/3‑deoxy‑7‑phosphoheptulonate synthase |
| Reads supporting (aligned to +/- strand): ref base C (62/82); new base G (10/2); total (75/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.28e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.61e-01 | |||||||||||
Only 100 of 172 total aligned reads displayed.
TTGAAAGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCGGTGATCG > NC_002947/2089149‑2089446 | aaGGGATGGCCCTTACGGCGGGTCCCTATTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCCGCCCCTACGCTGCGCTCCGGGGTCCCCACGCTCCCCCCGAGCTACCGGGCGCCCCCCCACCAGGCCccagcccag > 1:2343358/1‑147 (MQ=14) aGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATgg < 2:475175/150‑1 (MQ=255) aGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATgg < 2:2276202/150‑1 (MQ=255) gggATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATggg < 2:1892025/150‑1 (MQ=255) gCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCAGCC‑CTGGGGCCT‑Ca > 2:1445355/1‑150 (MQ=255) gCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCGTTGTCCCGGGTGCACCCGCTGGAGGGCCCATCCAATgggggtga > 1:846414/1‑146 (MQ=14) cccTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCAACGCTGCGCTCCGGGGTCCCCGCCCGCCCGCCATGCAACCCGGAGCACCCCCAGCACGCCCCCACC‑AAGGGGCca‑cac > 1:3798404/1‑149 (MQ=14) ccTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGCGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAgc > 2:820763/1‑150 (MQ=255) cTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAgcg < 2:4225046/150‑1 (MQ=255) ttACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAgcgc < 2:2327709/150‑1 (MQ=255) cggcggGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATGG‑ATGGGGCCTGCAgcgcgt < 2:3326480/150‑3 (MQ=255) gcggGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGAc < 1:2054993/150‑1 (MQ=255) gttccTTTTTGCCACGACAAAAAGGGACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGc > 2:3626748/4‑150 (MQ=17) ttccTTTTTGCCACGACAAAAAGGGACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCa > 2:2524627/3‑150 (MQ=17) tttttGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCa > 2:1764188/1‑150 (MQ=255) ttttGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCAt < 2:657411/150‑1 (MQ=255) tttGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCACGCTCCGGCCGTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCCTCCATg > 2:2552602/1‑150 (MQ=255) ttGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGc < 1:1057033/150‑1 (MQ=255) ttGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGc < 1:211168/150‑1 (MQ=255) gTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTc < 2:1693403/150‑1 (MQ=255) aaaaaGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTACCGGGAGCACGCGCTGCAGGCCCCATAC‑ATGGGGCCA‑CAGCGCTTGAAGGGCATCCAAGCCCGTCAactc > 1:2933205/1‑150 (MQ=17) ggAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATctccctcc > 2:2591651/1‑150 (MQ=255) ccAAAAACCGTCGGCTCCCATCATCCAGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCaa < 2:2214327/150‑1 (MQ=255) cAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCGCCGGCCTTGCTACCGGGAGCACGCGCTGCAGGCCCCATCC‑AAGGGGCCG‑CAGCGCGTGAAGGGCATCCATGCCCGTCATCTCCcgccgccag > 2:1537634/1‑147 (MQ=17) aaCCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCt < 1:458429/150‑1 (MQ=255) aCCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTc < 2:1970099/150‑1 (MQ=255) aCCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTc < 2:4238598/150‑1 (MQ=255) cGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCa < 2:4472605/150‑1 (MQ=255) tCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACt < 2:2685684/150‑1 (MQ=255) tCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCATGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑AGGGGGCCT‑CAGCGCTTGACGGGCAACCATGCCCGTCATCTACCTCCGCAATGCCTCCAca > 1:2610883/1‑149 (MQ=255) tCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCAtc < 1:1307905/124‑1 (MQ=255) tCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCAGCTCCCTCCGCCATGCCTCCACTCGGcc > 2:3756963/1‑150 (MQ=255) ccATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCACCCGGGGGCACGCGCGGCAGGCCCCAACC‑ATGGGGCCG‑CAGCGCATGACCGGCCTCCAAGCCCGTCATATCCCTCCGCAAAGCCACCACACGGccac > 1:2928193/1‑148 (MQ=18) ccATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCACGCGCCGGCCTTGCTACCGGGAGCACCCCCGGCAGGCCCCAACC‑ATGGGGCCT‑CAGCGCTTGACGGGCCTCCATGCCCGTCATATCCCACCCCAAAGCCGCCACACCGcctc > 1:2898551/1‑150 (MQ=17) catcatCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGCGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGGCATCTCCCTCCGCACTGCCTCCACTCGGcctcc > 2:4025459/1‑150 (MQ=255) catcatCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCACCGGCCGTGCTCCCGGGCGCACGCCCGGCAGGCCCCAGCC‑AAGGGGCCG‑CACCGCATGGCGGGCCACCCAGCCCCTCAACACCCCCCCCAAAGCCACCCCACGGccacc > 1:4486697/1‑150 (MQ=12) atcatcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGcctcct < 1:1787091/150‑1 (MQ=255) atcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGaa < 2:3868948/150‑1 (MQ=255) atcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGaa < 2:307706/150‑1 (MQ=255) atcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGaa < 1:2426127/150‑1 (MQ=255) cGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTc < 2:3993902/150‑1 (MQ=255) gCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGc < 2:3094764/150‑1 (MQ=255) cTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCA‑GCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCTTCTCCCTGCGCAATGCCTCCAGTCGGCCTCCTGAAGTCGCAATCTGCGTc < 1:689307/150‑1 (MQ=255) tCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTg < 2:1436401/150‑1 (MQ=255) tCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTAcc < 1:2298154/150‑1 (MQ=255) cccTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACcgc < 1:3923473/150‑1 (MQ=255) cccTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACcgc > 2:3009721/1‑150 (MQ=255) cccTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACcgc > 1:1854551/1‑150 (MQ=255) tCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACcgcgcg > 2:123679/1‑150 (MQ=255) cGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCTTCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCAATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCgcgcgc < 1:4037956/150‑1 (MQ=255) tCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTa > 2:1219361/1‑150 (MQ=255) tCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTa < 1:408798/150‑1 (MQ=255) ccGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAg < 2:167040/150‑1 (MQ=255) ggCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGaa < 1:3285555/150‑1 (MQ=255) ggCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGaa > 1:3885390/1‑150 (MQ=255) ggCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCATCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGaa < 2:2844921/150‑1 (MQ=255) ttGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCaa < 2:4479482/150‑1 (MQ=255) ttGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCaa < 1:224439/150‑1 (MQ=255) ttGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCaa < 1:2808897/150‑1 (MQ=255) cTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGcccgat > 1:1955072/1‑145 (MQ=255) cTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGAt < 2:2398571/150‑1 (MQ=255) cTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGAt < 2:2906997/150‑1 (MQ=255) ccGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaa > 1:4113647/1‑150 (MQ=255) ccGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaa > 1:234426/1‑150 (MQ=255) ccGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaa > 1:2561640/1‑150 (MQ=255) gggAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaaa > 2:2096552/1‑150 (MQ=255) gAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGc < 2:1875424/150‑1 (MQ=255) gAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGc < 2:812946/150‑1 (MQ=255) gAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGc < 2:843009/150‑1 (MQ=255) tcaagcgcTG‑AGGCCCCATGG‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCgag > 2:881204/5‑150 (MQ=17) gCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCga < 2:3451044/150‑1 (MQ=255) caagcgcTG‑AGGCCCCATGG‑ATGGGGCCTGCAGCGCGTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCgag > 2:1215293/4‑150 (MQ=17) cgcgCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGaa < 1:3862934/150‑1 (MQ=255) cgcgCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGaa < 2:3513584/150‑1 (MQ=255) gcgcTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAg < 1:3420969/150‑1 (MQ=255) gcgcTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAg > 1:3657145/1‑150 (MQ=255) gcgcTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAg > 2:189505/1‑150 (MQ=255) gcgcTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAg > 2:3969432/1‑150 (MQ=255) cgcTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGc < 1:1444918/150‑1 (MQ=255) cgcTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGc < 2:2933205/150‑1 (MQ=255) gcTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCg > 2:4254638/1‑150 (MQ=255) gctgaGGCCCCATGG‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATAAAAAGCGAGAAGCGa > 1:4238047/5‑150 (MQ=255) tGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGaa > 2:3251950/1‑150 (MQ=255) tGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGaa < 2:3895061/150‑1 (MQ=255) tGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAAAGCCAAAGCaagagcaaga > 1:1895996/1‑144 (MQ=14) tgaGGCCCCATGG‑ATGGGGCCTGCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGaa > 1:3221711/3‑150 (MQ=255) tgaGGCCCCATGG‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAAt > 1:3049583/3‑150 (MQ=255) tgaGGCCCCATGG‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAAt > 1:726544/3‑150 (MQ=255) gCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAAAGCCAAAGCaagagcaagag > 1:3656601/1‑143 (MQ=11) gaGGCCCCATGG‑ATGGGGCCTGCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAAt > 1:3262239/2‑150 (MQ=255) aGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTc > 2:4112034/1‑150 (MQ=255) gCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCgg < 1:900708/150‑1 (MQ=255) gCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCgg > 2:1284554/1‑150 (MQ=255) ccccATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCGGt < 2:2858261/150‑1 (MQ=255) ccccATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCGGt < 2:4172117/150‑1 (MQ=255) ccatcc‑atGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCg > 2:1025855/1‑146 (MQ=255) ccatcc‑atGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCg < 1:1025855/146‑1 (MQ=255) ccatcc‑atGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCGGTGa > 1:1278277/1‑150 (MQ=255) ccatcc‑atGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCGGTGa > 1:1207919/1‑150 (MQ=255) atcc‑atGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCGGTGATc < 2:1067242/150‑1 (MQ=255) | TTGAAAGGGATGGCCCTTACGGCGGGTCCCTTTTTGTCGTGGCAAAAAGGAACCAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCC‑ATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAATGCCTCCACTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAGAAGCGAATTCGGTGATCG > NC_002947/2089149‑2089446 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |