BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,110,984	A→T	6.6%	I104N (ATT→AAT)	PP_1881 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,110,984	0	A	T	6.6%	688.4 / 25.3	209	I104N (ATT→AAT)	PP_1881	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (89/105); new base T (8/6); total (97/112)
Fisher's exact test for biased strand distribution p-value = 5.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 211 total aligned reads displayed.

GGTGTGAAACATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTTGTGCAGCGTGCC  >  NC_002947/2110835‑2111132

ggTGTGAAACATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCaa                                                                                                                                                      >  2:3370246/1‑150 (MQ=255)

 gtgtGAAACATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAAt                                                                                                                                                     >  2:2917064/1‑150 (MQ=255)

 gtgtGAAACATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCAGTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAAt                                                                                                                                                     >  2:3738163/1‑150 (MQ=255)

  tgtgAAACATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATg                                                                                                                                                    >  2:1531422/1‑150 (MQ=255)

     gAAACATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGcc                                                                                                                                                 <  2:4192334/150‑1 (MQ=255)

     gAAACATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGcc                                                                                                                                                 <  2:123134/150‑1 (MQ=255)

     gAAACATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGcc                                                                                                                                                 <  1:3127981/150‑1 (MQ=255)

      aaaCATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGccc                                                                                                                                                <  1:2232434/150‑1 (MQ=255)

       aaCATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCt                                                                                                                                               >  1:733356/1‑150 (MQ=255)

       aaCATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCt                                                                                                                                               >  1:1854332/1‑150 (MQ=255)

        aCATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTCCGACAGGGCCAATGGCCCTg                                                                                                                                              >  2:4441954/1‑150 (MQ=255)

         cATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGCATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCATTGGCCCTgt                                                                                                                                             <  2:3324333/150‑2 (MQ=255)

         cATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCATTGGCCCTgt                                                                                                                                             <  1:3710831/150‑2 (MQ=255)

          atatTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCATTGGCCCTgtc                                                                                                                                            <  1:231495/150‑3 (MQ=255)

          atatCGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCATTGGCCCTgtc                                                                                                                                            <  1:3285654/150‑3 (MQ=255)

             ttGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGgt                                                                                                                                         <  1:2362860/150‑1 (MQ=255)

               ggTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGTAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCATTGGCCCTgtcgaaaa                                                                                                                                       <  1:4194123/150‑8 (MQ=255)

                gTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGtt                                                                                                                                      >  2:2277303/1‑150 (MQ=255)

                   gCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTc                                                                                                                                   <  1:2801547/150‑1 (MQ=255)

                    cccTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCg                                                                                                                                  >  2:2524399/1‑150 (MQ=255)

                      cTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGTCGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGTCGGGAGAAACTTTTCGACAGGGACTATTGCCATTAAGGTGTTTTCGgc                                                                                                                                <  2:2578801/150‑1 (MQ=255)

                             gcGACCAGTTCGTAGCGAATCCACAGGTTGCCAGGGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCAGGCACGAGGGGCGGGAGAAACTTTTCTACAGGGCCAATGGCCCAGAAGGTGTTTTCGGCGCCAGTc                                                                                                                         >  1:1152066/2‑150 (MQ=255)

                                aCCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAg                                                                                                                      <  2:2013902/150‑1 (MQ=255)

                                aCCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAg                                                                                                                      <  1:3872158/150‑1 (MQ=255)

                                 ccAGTTCGTAGCGAATCCACAGTTTGCCATCGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAgg                                                                                                                     <  1:1537166/150‑1 (MQ=255)

                                  cAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGt                                                                                                                    >  2:3303486/1‑150 (MQ=255)

                                    gTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGa                                                                                                                  >  2:2468849/1‑150 (MQ=255)

                                     ttCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGaa                                                                                                                 <  1:4027452/150‑1 (MQ=255)

                                      tCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAAc                                                                                                                >  2:2189087/1‑150 (MQ=255)

                                        gTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGGCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTg                                                                                                              >  2:2428879/1‑150 (MQ=255)

                                        gTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTg                                                                                                              >  2:2936029/1‑150 (MQ=255)

                                          aGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCa                                                                                                            >  2:1605198/1‑150 (MQ=255)

                                          aGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCa                                                                                                            <  1:3144487/150‑1 (MQ=255)

                                          aGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCa                                                                                                            <  1:3847878/150‑1 (MQ=255)

                                           gCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAg                                                                                                           >  1:3108013/1‑150 (MQ=255)

                                             gAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGtt                                                                                                         >  2:3651481/1‑150 (MQ=255)

                                                tCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTa                                                                                                      >  1:3893052/1‑150 (MQ=255)

                                                 ccACAGTTTGCCATTGCGTGGAATGGACGCCTGGTGAAAAGGCAGTGCTAACGGAAAGTCTGCTGGCACGAGGTGCGGGAGAAACTTTTCGACATGGAGAATGGCCCTGAAGGTGTTTTCGGCGCCTGTCAAGGTGAACTGCAGTTGTaa                                                                                                     <  1:3465336/150‑1 (MQ=255)

                                                   acaGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACg                                                                                                   >  2:3467262/1‑150 (MQ=255)

                                                       tttGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGa                                                                                               <  1:1332785/150‑1 (MQ=255)

                                                        ttGCCATTGCGTGGAATGGACGCCCGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGag                                                                                              <  1:2347692/150‑1 (MQ=255)

                                                            cATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGagtagt                                                                                          >  1:158807/1‑150 (MQ=255)

                                                             aTTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTc                                                                                         <  2:1223564/150‑1 (MQ=255)

                                                                 cGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCAttt                                                                                     <  2:3080821/150‑1 (MQ=255)

                                                                         ggACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCACGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACt                                                                             >  2:4369987/1‑150 (MQ=255)

                                                                         ggACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACt                                                                             <  1:3069032/150‑1 (MQ=255)

                                                                          gACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTg                                                                            >  1:1730843/1‑150 (MQ=255)

                                                                           aCGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGc                                                                           >  1:3265484/1‑150 (MQ=255)

                                                                           aCGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGc                                                                           <  2:582322/150‑1 (MQ=255)

                                                                               cTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCgg                                                                       >  2:4100298/1‑150 (MQ=255)

                                                                                tGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGt                                                                      >  2:1113522/1‑150 (MQ=255)

                                                                                 ggggACACGCCAGTGCTACCGGACCGGCGCCTGGCACGAGGGGCGGGAGAAACTGTTCGCCCGGGCCCAGGGCCCTGCCGGTGGTGTCGGCGCCCGTCAAGGTGCCCGTCCGGGGGAACGTCGCGTAGTCATTGGGCTCACTGCCCgggg                                                                     <  2:141347/150‑3 (MQ=255)

                                                                                   ggAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGc                                                                   >  1:2649095/1‑150 (MQ=255)

                                                                                   ggAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGACGAGTAGTCATTTGGATCACTGCCCGGTGGc                                                                   >  1:2841123/1‑150 (MQ=255)

                                                                                     aaaaGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAg                                                                 <  2:3790913/150‑1 (MQ=255)

                                                                                       aaGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGt                                                               <  2:3439555/150‑1 (MQ=255)

                                                                                       aaGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGt                                                               <  1:1422025/150‑1 (MQ=255)

                                                                                       aaGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGt                                                               <  2:4317444/150‑1 (MQ=255)

                                                                                        aGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTc                                                              >  1:3531682/1‑150 (MQ=255)

                                                                                         gCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCCAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCa                                                             >  2:3556928/1‑150 (MQ=255)

                                                                                          ccAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAg                                                            >  1:1494561/1‑150 (MQ=255)

                                                                                                 tAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGc                                                     >  2:532264/1‑150 (MQ=255)

                                                                                                 tAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGc                                                     >  1:4457579/1‑150 (MQ=255)

                                                                                                  aaCGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCg                                                    >  1:1695139/1‑150 (MQ=255)

                                                                                                    cGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCggg                                                  <  2:2469222/150‑1 (MQ=255)

                                                                                                     ggAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGACGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCCGTTGTAACGTCGAGGAGTCCTTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCgggg                                                 >  2:3013812/1‑150 (MQ=255)

                                                                                                      gAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGa                                                >  1:1199710/1‑150 (MQ=255)

                                                                                                       aaaGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGcc                                                                                                                                                 <  1:2976277/52‑1 (MQ=255)

                                                                                                       aaaGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGAt                                               <  2:3213535/150‑1 (MQ=255)

                                                                                                       aaaGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGAt                                               <  2:2628408/150‑1 (MQ=255)

                                                                                                             tcCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGAc                                         >  1:1880930/1‑150 (MQ=255)

                                                                                                             tcCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGAc                                         <  2:589270/150‑1 (MQ=255)

                                                                                                               cTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCCTGCGGGGAGCTCGACgg                                       >  2:3696565/1‑150 (MQ=255)

                                                                                                                 ggCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTc                                     <  1:1239885/150‑1 (MQ=255)

                                                                                                                  gCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCa                                    <  2:1189148/150‑1 (MQ=255)

                                                                                                                    aCGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAgg                                  >  2:2247643/1‑150 (MQ=255)

                                                                                                                      gAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTc                                >  1:2085685/1‑150 (MQ=255)

                                                                                                                      gAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTc                                >  1:26260/1‑150 (MQ=255)

                                                                                                                       aGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCg                               <  2:163153/150‑1 (MQ=255)

                                                                                                                       aGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCg                               <  1:1611539/150‑1 (MQ=255)

                                                                                                                       aGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCg                               <  2:1745373/150‑1 (MQ=255)

                                                                                                                         gggCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGt                             <  2:195274/150‑1 (MQ=255)

                                                                                                                            cGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGtttt                          <  2:1275198/150‑1 (MQ=255)

                                                                                                                            cGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGtttt                          <  2:3552564/150‑1 (MQ=255)

                                                                                                                             gggAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTc                         <  2:3713643/150‑1 (MQ=255)

                                                                                                                                      ttttCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCt                >  2:1004386/1‑150 (MQ=255)

                                                                                                                                       tttCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCtt               <  2:4172467/150‑1 (MQ=255)

                                                                                                                                       caccttcAGGGCCATTGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCtt               >  2:42322/7‑150 (MQ=255)

                                                                                                                                        ttCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCttt              <  1:946896/150‑1 (MQ=255)

                                                                                                                                        ttCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCttt              <  2:457646/150‑1 (MQ=255)

                                                                                                                                        accttcAGGGCCATTGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCttt              >  2:1826216/6‑150 (MQ=255)

                                                                                                                                         tCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTtg             <  1:1045043/150‑1 (MQ=255)

                                                                                                                                         tCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTtg             <  1:53545/150‑1 (MQ=255)

                                                                                                                                          cGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGTGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTtgt            <  2:1924119/150‑1 (MQ=255)

                                                                                                                                          cGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTtgt            <  2:751148/150‑1 (MQ=255)

                                                                                                                                           ttcAGGGCCATTGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTtgtg           >  1:4220610/3‑150 (MQ=255)

                                                                                                                                           ttcAGGGCCATTGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTtgtg           >  2:806705/3‑150 (MQ=255)

                                                                                                                                            accgggCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTTGTGc          <  1:911841/147‑1 (MQ=255)

                                                                                                                                            aCAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTTGTGc          <  2:1854332/150‑1 (MQ=255)

                                                                                                                                               gggCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTTGTGCAGc       >  1:3679979/1‑150 (MQ=255)

GGTGTGAAACATATTGGTCGCCCTTGTGGTCGACCAGTTCGTAGCGAATCCACAGTTTGCCATTGCGTGGAATGGACGCCTGGGGAAAAGCCAGTGCTAACGGAAAGTCTCCTGGCACGAGGGGCGGGAGAAACTTTTCGACAGGGCCAATGGCCCTGAAGGTGTTTTCGGCGCCAGTCAAGGTGAACTGCAGTTGTAACGTCGAGTAGTCATTTGGATCACTGCCCGGTGGCAGGTCAGACCATGCGGGGATCTCGACGGTCAGGTCGGTTTTCAGGCGGTCTTTGTGCAGCGTGCC  >  NC_002947/2110835‑2111132

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`