| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,198,294 | G→A | 5.0% | intergenic (‑665/+58) | PP_1940 ← / ← PP_1941 | methyl‑accepting chemotaxis transducer/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,198,294 | 0 | G | A | 5.0% | 652.2 / 15.2 | 199 | intergenic (‑665/+58) | PP_1940/PP_1941 | methyl‑accepting chemotaxis transducer/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (109/80); new base A (3/7); total (112/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.26e-01 | |||||||||||
Only 100 of 204 total aligned reads displayed.
GGTGACCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCACATCATTA > NC_002947/2198146‑2198440 | gACCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCgctgc < 2:1710494/150‑1 (MQ=255) cccAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCtgctgc > 1:4299071/1‑150 (MQ=255) cccAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCtgctgc > 1:3647029/1‑150 (MQ=255) ccAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCg > 1:4125842/1‑150 (MQ=255) ccAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCg < 1:1601528/150‑1 (MQ=255) cAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCga < 2:1956909/150‑1 (MQ=255) cAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCga < 1:4446144/150‑1 (MQ=255) cAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCAGCGCTGCgg < 2:3580490/150‑2 (MQ=255) aGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCTCGCAGCAGCGCTGCggg < 1:336949/150‑3 (MQ=255) ggTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCgaga < 2:3648579/150‑1 (MQ=255) ggTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCgaga < 1:454605/150‑1 (MQ=255) gTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGAt > 1:1311133/1‑150 (MQ=255) gTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAAc < 2:416814/150‑1 (MQ=255) gTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAAc > 1:2096412/1‑150 (MQ=255) tGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCTCGCAGCAGCGCTGCGGGAtttcat < 1:1797701/150‑5 (MQ=255) tGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCTCGCAGCAGCGCTGCGGGAtttcat < 2:587393/150‑5 (MQ=255) tGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAAcc > 1:1451014/1‑150 (MQ=255) ggggAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGAtttcatt < 2:3115030/150‑6 (MQ=255) gggAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTa > 1:863644/1‑150 (MQ=255) tGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGc > 1:940182/1‑150 (MQ=255) tGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGc > 2:758167/1‑150 (MQ=255) tGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGc > 2:2263274/1‑150 (MQ=255) aaTCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGt < 1:1344342/150‑1 (MQ=255) tcatcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTcc > 1:1194805/1‑150 (MQ=255) tcatcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTcc > 1:4376786/1‑150 (MQ=255) catcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCa < 1:2163237/150‑1 (MQ=255) tcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAgg > 2:3664087/1‑150 (MQ=255) tcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAgg > 2:1552200/1‑150 (MQ=255) ccAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGc < 2:2455181/150‑1 (MQ=255) cAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGcc > 1:479705/1‑150 (MQ=255) aGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGcccc < 1:2206056/150‑1 (MQ=255) ggAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGAAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTgg < 1:2472544/150‑1 (MQ=255) ccATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAg > 2:3530356/1‑150 (MQ=255) ccATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGAGTAGGCACGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGCGCGGCCAGGCCCCGTTGGCACTAg > 2:3811064/1‑150 (MQ=255) gCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAAt < 2:4474124/150‑1 (MQ=255) tAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCACTga > 2:3273479/1‑150 (MQ=255) tAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATga < 2:2078550/150‑1 (MQ=255) tAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATga > 2:1420583/1‑150 (MQ=255) aaGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTGTACTATCAGACAGCCTGTGCGCCTTGATTAGGCACGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATgaga < 2:1614854/150‑1 (MQ=255) aTGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGa < 1:2015212/150‑1 (MQ=255) aTGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGa < 1:3906310/150‑1 (MQ=255) ggATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGaaa < 1:818498/150‑1 (MQ=255) ggATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGaaa > 1:159985/1‑150 (MQ=255) gATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGaaaa > 2:712790/1‑150 (MQ=255) aTCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAAc > 1:3448735/1‑150 (MQ=255) aTCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAAc > 2:164279/1‑150 (MQ=255) tCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAAct > 1:3628763/1‑150 (MQ=255) cTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctc > 2:4365322/1‑150 (MQ=255) cTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctc > 1:2934559/1‑150 (MQ=255) cTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctc > 1:3071462/1‑150 (MQ=255) ttCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctct > 2:1157326/1‑150 (MQ=255) tCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGTTTAGGCAAGGCTATGTAATGCCGCAGCGCTGCTGCGAGATTTACCTACCGTGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCtt < 2:3892271/150‑1 (MQ=255) tCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCtt < 2:869985/150‑1 (MQ=255) tCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCtt < 1:1790962/150‑1 (MQ=255) cagcagTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAAt > 2:2146779/1‑129 (MQ=255) gcagTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGAc < 2:2414987/150‑1 (MQ=255) ggAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCa < 1:3791934/150‑1 (MQ=255) aaCGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGc > 1:266027/1‑150 (MQ=255) gCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCaa < 1:4237234/150‑1 (MQ=255) gCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCaa < 2:1576192/150‑1 (MQ=255) gCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCaa > 2:4122859/1‑150 (MQ=255) gCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCaa > 2:1772867/1‑150 (MQ=255) tttACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGa > 1:2642373/1‑150 (MQ=255) tttACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGa > 1:1498219/1‑150 (MQ=255) tttACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGa > 1:3589925/1‑150 (MQ=255) tttACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGa > 2:1347784/1‑150 (MQ=255) tttACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGa > 1:3301737/1‑150 (MQ=255) aCTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGAttt < 2:1233692/150‑1 (MQ=255) aCTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGAttt < 2:3510300/150‑1 (MQ=255) tATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCa > 1:3324116/1‑150 (MQ=255) aTCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCaa > 2:23273/1‑150 (MQ=255) aTCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCaa > 2:2804517/1‑150 (MQ=255) tCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCaaa > 2:562975/1‑150 (MQ=255) tCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCaaa < 1:578019/150‑1 (MQ=255) aGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAAc > 2:3957935/1‑150 (MQ=255) aGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAAc > 1:2304600/1‑150 (MQ=255) aGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAAc > 1:2651788/1‑150 (MQ=255) ccTGTGCGCCTTGATTAGGCAAGTCAATGTAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTc < 2:820092/150‑1 (MQ=255) tgCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGa < 1:650639/150‑1 (MQ=255) gcCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTa < 2:3412809/150‑1 (MQ=255) ccTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTaa < 1:3206856/150‑1 (MQ=255) cTTGATTAGGCAAGGCAATGAAATCCCGCAGTGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAAt > 1:2513178/1‑150 (MQ=255) cTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAAt > 2:3735440/1‑150 (MQ=255) ttGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATa > 1:2690855/1‑150 (MQ=255) ttGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATa < 2:1954692/150‑1 (MQ=255) gcaaggcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGa < 2:1449863/150‑1 (MQ=255) gcaaggcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGa > 2:2978259/1‑150 (MQ=255) gcaaggcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGa < 2:1464418/150‑1 (MQ=255) gcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGc > 1:1671386/1‑150 (MQ=255) gcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGc < 1:1552200/150‑1 (MQ=255) aaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCt > 1:1087171/1‑150 (MQ=255) aaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCt > 1:2797173/1‑150 (MQ=255) tGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAg < 1:500319/150‑1 (MQ=255) aaaTCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGcc > 2:1941753/1‑150 (MQ=255) aaTCTCGCAGCAGCGCTGCGGGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAgg > 1:3407474/1‑132 (MQ=255) aaTCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCca > 1:3761880/1‑150 (MQ=255) cGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCTGCCTAGCCAcatca > 2:544518/1‑150 (MQ=255) cGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCAcatca > 1:2428773/1‑150 (MQ=255) cGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCAcatca > 2:1839918/1‑150 (MQ=255) aGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCACATCATTa < 1:1423962/150‑1 (MQ=255) | GGTGACCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCACATCATTA > NC_002947/2198146‑2198440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |