| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,198,296 | T→C | 5.1% | intergenic (‑667/+56) | PP_1940 ← / ← PP_1941 | methyl‑accepting chemotaxis transducer/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,198,296 | 0 | T | C | 5.1% | 646.0 / 14.4 | 194 | intergenic (‑667/+56) | PP_1940/PP_1941 | methyl‑accepting chemotaxis transducer/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (104/80); new base C (3/7); total (107/87) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 202 total aligned reads displayed.
GTGACCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCACATCATTA > NC_002947/2198147‑2198440 | gTGACCCCAGTTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGACTTGATTAGGCAAGGCAATGAAATCCCGCAGCgct < 2:2023057/150‑1 (MQ=255) gACCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCgctgc < 2:1744344/150‑1 (MQ=255) ccccAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGctgctg > 2:151945/1‑150 (MQ=255) cccAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCtgctgc > 1:339472/1‑150 (MQ=255) ccAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCg < 1:1601528/150‑1 (MQ=255) cAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCAGCGCTGCgg < 2:3580490/150‑2 (MQ=255) ggTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCgaga < 2:3648579/150‑1 (MQ=255) gTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGAt > 1:1311133/1‑150 (MQ=255) gTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAAc < 2:416814/150‑1 (MQ=255) gTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAAc > 1:2096412/1‑150 (MQ=255) tGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCTCGCAGCAGCGCTGCGGGAtttcat < 1:4071686/150‑5 (MQ=255) tGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCTCGCAGCAGCGCTGCGGGAtttcat < 2:587393/150‑5 (MQ=255) tGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCTCGCAGCAGCGCTGCGGGAtttcat < 1:1797701/150‑5 (MQ=255) tGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAAcc > 1:1451014/1‑150 (MQ=255) ggggAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGAtttcatt < 2:3115030/150‑6 (MQ=255) ggAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTAc > 1:3616570/1‑150 (MQ=255) aaCTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCg < 1:4309711/150‑1 (MQ=255) cTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAg > 2:2634893/1‑150 (MQ=255) tGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGc > 2:758167/1‑150 (MQ=255) aaTCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGt < 1:1344342/150‑1 (MQ=255) aaTCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGt > 1:2656745/1‑150 (MQ=255) tcatcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTcc > 1:1194805/1‑150 (MQ=255) catcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCa < 1:4253424/150‑1 (MQ=255) catcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCa < 1:2163237/150‑1 (MQ=255) tcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAgg > 2:3664087/1‑150 (MQ=255) tcCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAgg > 2:2102417/1‑150 (MQ=255) aGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGcccc < 1:2206056/150‑1 (MQ=255) ggAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGAAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTgg < 1:2472544/150‑1 (MQ=255) ccATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAg > 2:3530356/1‑150 (MQ=255) ccATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGAGTAGGCACGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGCGCGGCCAGGCCCCGTTGGCACTAg > 2:3811064/1‑150 (MQ=255) gCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAAt > 2:2440568/1‑150 (MQ=255) gCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAAt < 2:4474124/150‑1 (MQ=255) tAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCACTga > 2:3273479/1‑150 (MQ=255) tAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATga > 1:891602/1‑150 (MQ=255) gcgcATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACt < 1:3448614/150‑1 (MQ=255) aTGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGa < 1:2015212/150‑1 (MQ=255) ggATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGaaa > 1:159985/1‑150 (MQ=255) ggATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGaaa > 2:1412660/1‑150 (MQ=255) gATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGaaaa > 2:712790/1‑150 (MQ=255) gATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGaaaa > 1:4436270/1‑150 (MQ=255) gATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGaaaa > 1:955509/1‑150 (MQ=255) aTCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAAc > 2:164068/1‑150 (MQ=255) cTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAAGCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctc < 1:519911/150‑1 (MQ=255) cTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctc > 1:2934559/1‑150 (MQ=255) cTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctc > 2:4365322/1‑150 (MQ=255) cTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAActctc > 1:3071462/1‑150 (MQ=255) tCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGTTTAGGCAAGGCTATGTAATGCCGCAGCGCTGCTGCGAGATTTACCTACCGTGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCtt < 2:3892271/150‑1 (MQ=255) tCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCtt < 2:869985/150‑1 (MQ=255) tCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCtt < 1:1790962/150‑1 (MQ=255) tCAGCAGTGATAGGAACGCCTTTACTATCAGACATCCTGAGCGCCTAGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCtt > 2:2190099/1‑150 (MQ=255) gATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTATCTTGACCACTg < 1:450131/150‑1 (MQ=255) ggAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCa > 1:863007/1‑150 (MQ=255) ggAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCa > 2:1423962/1‑150 (MQ=255) gAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAg < 1:3845536/150‑1 (MQ=255) aaCGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGc > 1:3538066/1‑150 (MQ=255) aaCGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGc > 1:2724941/1‑150 (MQ=255) gCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCaa > 2:4122859/1‑150 (MQ=255) tttACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGa > 1:1498219/1‑150 (MQ=255) tttACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGa > 1:3301737/1‑150 (MQ=255) aCTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGAttt < 2:3510300/150‑1 (MQ=255) cTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTc < 1:3775444/150‑1 (MQ=255) cTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCAGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTc < 1:36607/150‑1 (MQ=255) tATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCa > 1:3324116/1‑150 (MQ=255) aTCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCaa > 2:2804517/1‑150 (MQ=255) aTCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCaa > 1:2687250/1‑150 (MQ=255) tCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCaaa > 2:1559642/1‑150 (MQ=255) tCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCaaa > 2:562975/1‑150 (MQ=255) cAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCaaaa < 1:712568/150‑1 (MQ=255) cAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCaaaa < 2:195065/150‑1 (MQ=255) aGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAAc > 1:2304600/1‑150 (MQ=255) aGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAAc < 2:1194805/150‑1 (MQ=255) aGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAAc < 2:2339735/150‑1 (MQ=255) aGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAAc > 2:3957935/1‑150 (MQ=255) aGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAAc > 1:2651786/1‑150 (MQ=255) gACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAAcc > 1:3631850/1‑150 (MQ=255) aCATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTaa < 2:1900404/107‑1 (MQ=255) aCATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCt < 2:1816184/150‑1 (MQ=255) cATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTg < 1:587194/150‑1 (MQ=255) ccTGTGCGCCTTGATTAGGCAAGTCAATGTAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTc < 2:820092/150‑1 (MQ=255) tgCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGa < 1:4169559/150‑1 (MQ=255) tgCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGa < 1:499367/150‑1 (MQ=255) gcCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTa < 2:3412809/150‑1 (MQ=255) ccTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAACACCTGCTCGCGAGTat > 2:1697410/1‑149 (MQ=255) ccTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTaa < 1:3206856/150‑1 (MQ=255) cTTGATTAGGCAAGGCAATGAAATCCCGCAGTGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAAt > 1:2513178/1‑150 (MQ=255) cTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAAt > 2:1333904/1‑150 (MQ=255) cTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAAt > 2:3735440/1‑150 (MQ=255) ttGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATa < 2:1954743/150‑1 (MQ=255) gcaaggcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGa > 2:2978259/1‑150 (MQ=255) aaggcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATc > 1:46876/1‑150 (MQ=255) gcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGc < 1:1552200/150‑1 (MQ=255) gcaaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGc > 1:1671386/1‑150 (MQ=255) aaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCt > 1:1087171/1‑150 (MQ=255) aaTGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCt > 1:2797173/1‑150 (MQ=255) aaTCTCGCAGCAGCGCTGCGGGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAACCCTGCTCGCGAGTACTAGGGGCCGATCCGCCTAGccc > 2:2279351/1‑149 (MQ=255) aaTCTCGCAGCAGCGCTGCGGGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCca > 2:158213/1‑150 (MQ=255) cGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCTGCCTAGCCAcatca > 2:544518/1‑150 (MQ=255) cGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCAcatca > 1:2428773/1‑150 (MQ=255) aGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCACATCATTa < 2:1451014/150‑1 (MQ=255) aGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCACATCATTa < 1:1423962/150‑1 (MQ=255) | GTGACCCCAGGTCGGTGGGGAACTGAATCATCCAAGGATGGAGGCCCATCTGCTAAAGCGCATGGATCGCTTCAGCAGTGATCGGAACGCCTTTACTATCAGACATCCTGTGCGCCTTGATTAGGCAAGGCAATGAAATCCCGCAGCGCTGCTGCGAGATTAACCTACCGAGCGTCCAGGCCCCGTTGGCACTAGGGCAATGAGACTAAGAAAACTCTCTTGACCACTGCTCAGCCAACGATTTCAAAACCTGCTCGCGAGTAATAGGGGCCGATCCGCCTAGCCACATCATTA > NC_002947/2198147‑2198440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |