| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,402,493 | T→G | 9.3% | intergenic (‑246/+29) | evgA ← / ← dgt | two‑component system response regulator/deoxyguanosinetriphosphate triphosphohydrolase‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,402,493 | 0 | T | G | 9.3% | 321.7 / 2.1 | 147 | intergenic (‑246/+29) | evgA/dgt | two‑component system response regulator/deoxyguanosinetriphosphate triphosphohydrolase‑like protein |
| Reads supporting (aligned to +/- strand): ref base T (45/71); new base G (10/7); total (69/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 148 total aligned reads displayed.
TTACAAGATAAAACAAAATGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGGCGCTGTGCAACGAGGCATGCGGGTCT > NC_002947/2402346‑2402642 | ttACAAGATAAAACAAAATGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTgg > 2:1192971/1‑150 (MQ=255) tACAAGATAAAACAAAATGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGc < 2:1374634/150‑1 (MQ=255) aCAAGATAAAACAAAATGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGcc < 1:3933761/150‑1 (MQ=255) aCAAGATAAAACAAAATGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGcc < 1:4290771/150‑1 (MQ=255) aCAAGATAAAACAAAATGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCGGGcc > 1:2918713/1‑150 (MQ=255) aaGATAAAACAAAATGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGa < 2:1947904/150‑1 (MQ=255) aaGATAAAACAAAATGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGa < 1:183008/150‑1 (MQ=255) aGATAAAACAAAATGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCGGGCCGAg > 1:670621/1‑150 (MQ=255) tAAAACAAAATGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCGGGCCGAGccg > 1:1998057/1‑149 (MQ=255) aaaCAAAATGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCACTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGGGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTgc > 1:4177267/1‑150 (MQ=255) aaCAAAATGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTgcg < 2:633962/150‑1 (MQ=255) aaCAAAATGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTgcg < 2:633974/150‑1 (MQ=255) aCAAAATGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTgcgc < 1:547162/150‑1 (MQ=255) aaaTGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGc > 2:1219756/1‑150 (MQ=255) aaTGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCa > 2:2709435/1‑150 (MQ=255) tACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGAcgc > 2:926628/1‑150 (MQ=255) atcggTGTGCTTACCTCGCTGTCAAAGCGATTTTGGTAACTTTTCTTTAGTTTTTATTCGGGCCGTTTAGTGTGGCCCCGTTGGTGTAGGATGTTTCCTGCACGCGTGGTGCCGCGCCGGGCCGCGCCTGCGCTGCACCGACGCGTTTCa < 2:3388140/147‑1 (MQ=255) gtgtGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGcc > 2:724774/1‑150 (MQ=255) gtgtGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCCGGCCGCGCCTGCCCCGCACCGCCCCCTTTAAgggc > 1:1183571/1‑148 (MQ=255) gtgtGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCAGGCCGCGCCAGCGCAGCACCCACCCGGTTAAGGcc > 1:4299925/1‑150 (MQ=255) tgtgCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCCAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCg < 2:3459331/150‑1 (MQ=255) ttgCTTAACTCGCTTTAAAAGCTATTTTGTTAAATTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTTTAGGAATTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGAACCGACGCGTTTCAGGCCgg < 2:199234/149‑1 (MQ=255) gtgCTTAACTCGCTGTCAACGCGATTTTGGTAACTTTTCATTAGTTTTTATTGGTGCCGTTTCGTGTGGCCCCGTTGGTGTAGGAAGTTCCCTGCACGGGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCgg < 1:3239371/150‑1 (MQ=255) gCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGc < 2:4001574/150‑1 (MQ=255) cTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGGAGCGCCAGGCCGAGCCGGCGCAGCACCGACGCGGTTAAGGCCGGGcg > 1:120346/1‑149 (MQ=255) aaCTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGATGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGa < 2:3148712/150‑1 (MQ=255) aaCTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGa < 1:3322164/150‑1 (MQ=255) aaCTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGa < 2:2713882/150‑1 (MQ=255) cTCGCTGTCAACGCTTTTTTGGTAACTTTTCATTTGTTTTTATTCGTGCCGTTTTGTGTGGCCCCGTTGGTGTAGGATGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGCGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAgc < 1:3480237/150‑1 (MQ=255) cTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGGAGCGCCAGGCCGAGCCGGCGCGGCCCCCACGCGGTTGAGGCCGGGCGGGAgc > 1:164091/1‑150 (MQ=255) tCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCAACGAAGCGTTTAAGGCCGGGCTGGAgcg > 2:1666603/1‑150 (MQ=255) cGCTGTCAAAGCGATTTTGTTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAgcgc < 2:1168458/150‑1 (MQ=255) gctttaaaaGCTATTTTGGTAACTTTTAATTATTTTTTTTTCGTGCCTTTTTGTGTGGCCCCTTTGGTGTAGTAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCTAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGcc < 1:296116/144‑1 (MQ=255) tGTCAAAGCTATTTTTGTAAATTTTAATTTTTTTTTTTTCGTGCCGTTTTGTGTGGCCCGTTTGTTGTTGTATGTTTCCTGCACGGGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCg < 1:624955/150‑1 (MQ=255) tGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCg < 1:4132707/150‑1 (MQ=255) tGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCg < 2:4078705/150‑1 (MQ=255) aaaGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCCAGCCTGCGCTGCACCGACGCGTTTCAGGCCCGGCTGGAGCGCCCCGTCa > 2:762299/1‑150 (MQ=255) aaaGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCAGGCCCAGCCTGCGCTGCACCCACCCGTTTCAGGCCGGGCTGGAGCCCCCCGTCa > 1:268042/1‑150 (MQ=255) aaaGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCCCCTGGCCGAGCCTGCGCTGCACCCACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCa > 2:2800101/1‑150 (MQ=255) aaaGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGGTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCCACGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCa > 2:2800471/1‑150 (MQ=255) aaGCGAGTTTGGTAACTTTTCATTAGTTTTTATTCGTGCGGTTTAGTGTCGCCCCGGTGGTGTAGGAACTGTCCTGCACGCGTGGTGCAGCGCCGGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCAt > 2:1049679/1‑150 (MQ=255) aGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCCCCGCCAGGCCCAGCCAGCCCTGCCCCCACCCCGTTCAGGCCCGGCTGGAGCGcccccgcaac > 1:531085/1‑143 (MQ=255) aGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCAGGCCCACCCAGCGCATCAACCAACCCTTTAAGGCCGGGCTGGAGCGccccggcaaa > 1:1583110/1‑143 (MQ=255) aGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCACCGCCAGGCCCAGCCAGCGCTGCACCCACGCCTTTAAAGCCGGGCGGGAGCGccccggcaac > 1:1582808/1‑143 (MQ=255) gCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCACCGCCTGGCCGAGCCAGCGCAGCACCGACCCGTTTAAGGCCGGGCTGGAGCGCCCCGTCAact > 1:1068422/1‑150 (MQ=255) tttttGTTACCTTTTCTTTTGTTTTTATGGGGGCGGTTTTGTGGGGCCCGGTGGGTGTCGGATGTTTCCGGCCCGGGGGGGGCAGCGCCGGGCCGCGCCGGCGCGGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTccc < 1:105230/149‑1 (MQ=255) ttttGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGGCATCTCCCg > 2:1081615/1‑150 (MQ=255) ttGGTAACTTTTCATTAGTTTTTATTGGTGCCGTTTTGTGGGGCCCCGTTGGTGTAGGAATTTTCCGGCACGCGTGGTGCAGCGCGGGGCCGAGCCTGCGCGGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCggg < 1:2734336/150‑1 (MQ=255) aaCTTTTCATTATTTTTTATTCGTGCCTTTTAGTGTGGCCCCTTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCAtt < 2:152174/150‑1 (MQ=255) ttttCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCAGCGCTGCACCGACGCGTTTCAGGCCCGGCTGGAGCGCCCGGTCAACACCCGGGCCCTTTCg > 2:561901/1‑150 (MQ=255) ttttCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCAGGCCCAGCCTGCGCAGCACCCACGCGTTTCAGGCCGGGCGGGAGCGCCCGGTCAACACCCGGGCCaaatag > 1:4060598/1‑145 (MQ=255) ttttCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCCCCTGGCCCAGCCTGCGCTGCAACCACCCGTTTCAGGCCCGGCTGGAGCCCCCCGTCAACACCCGGGCCAattag > 2:1316407/1‑148 (MQ=255) ttttCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCCCCATGCCGAGCCAGCGCTGCAACCAACCCTTTAATGCCCGGCGGGAGCGCCCCGTCAACAACCCGGCCAattag > 1:1719317/1‑148 (MQ=255) ttatttATTTTTTTTTCGTGCCTTTTAGGGTGGCCCGTTTGTTTTTGTAATTTTCCTGAAAGCGTGGTGCAGCCCGGGGCCGAGCGTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCt < 1:1225391/146‑1 (MQ=255) ttCATTAGTTTTTATGCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCGGCACGCGTGGTGCAGCGCCTGGCCGAGCCGGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCt < 2:3878992/150‑1 (MQ=255) aTTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCTTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGc < 2:1587247/150‑1 (MQ=255) ttAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCGGGCCGAGCCAGCGCTGCACCGCCGCGGTTCAGGCCGGGCTGGAGCGCCCCGTCATATCCCGGGCCAATTAGCAGGCa > 1:1779605/1‑150 (MQ=255) aGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCACGCGTGGTGCAGCGCCTGGCCGCGCCTGCGCGGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATa < 2:14036/150‑1 (MQ=255) gTTTTTTTTCGTGGCGTTTAGTGTGGCCCGGTTGGTGTTGGAAGTTTCCTGCACGCGTGGGGCCGGGCCTGGCCGCCCCGGCGCGCCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAg < 1:570744/150‑1 (MQ=255) gTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTGGGTGTAGGAAGTTTCCTCCAAGCGTGGTGCCGCGCCGGGCCGAGCCGGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAg < 1:570418/150‑1 (MQ=255) tttttATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGc > 2:2230365/1‑150 (MQ=255) tttttATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCCACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGc > 2:3198061/1‑150 (MQ=255) tATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCAGAGCTGTc > 2:681608/1‑150 (MQ=255) ttCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCgg < 2:1061234/150‑1 (MQ=255) gtgtGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCGGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGAt < 2:617397/150‑1 (MQ=255) gtgGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGa < 2:2926246/150‑1 (MQ=255) tgGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGaa < 2:5515/150‑1 (MQ=255) ccccGTTGGTGTAGGATGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTc < 2:3024470/150‑1 (MQ=255) ccccGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTc < 1:1969703/150‑1 (MQ=255) ccccGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTc < 2:2035466/150‑1 (MQ=255) cccGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCg > 2:4347468/1‑150 (MQ=255) cccGGTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCCGCCCCTGGCCGCGCCGGCCCGGCACCGCCGCGGGGCCGGCCGGGGGGGTGCGCCCGGGCAGCGCCCGGGCCAGGTGGCGGGCCTAGGGGTCGGGCCGGCCGGCGAGGacggcg > 2:3250302/1‑145 (MQ=255) ccGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGa < 2:3103835/150‑1 (MQ=255) cGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGAt < 1:3707430/150‑1 (MQ=255) ggTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATg < 2:4184342/150‑1 (MQ=255) gtgtAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATgc < 2:264493/150‑1 (MQ=255) tAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGCTGAAGTCGATCATgcgcg > 2:2634159/1‑149 (MQ=255) agtatgTTTCCTGCAAGGGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAg < 1:755480/145‑1 (MQ=255) ggAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAgg > 2:4366127/1‑150 (MQ=255) gAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGa > 2:2559939/1‑150 (MQ=255) gAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTAGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGa > 1:3734741/1‑150 (MQ=255) aaGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGaa < 1:2238537/150‑1 (MQ=255) tttCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCCTGCCGGCGATGAAGTCGATCATGCGCAGGAAGgc > 2:4466520/1‑150 (MQ=255) gttCCTGCACGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGgc < 2:2918713/149‑1 (MQ=255) ttCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGgcg < 2:4177267/150‑1 (MQ=255) ccTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGGCGCt < 2:952517/150‑1 (MQ=255) ccTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGGCGCt < 2:574819/150‑1 (MQ=255) cTGCACGCGTGGTGCCGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGGCGCtg < 2:1958329/150‑1 (MQ=255) tGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGGCGCtgt < 2:4460056/150‑1 (MQ=255) tGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGGCGCtgt < 2:3076040/150‑1 (MQ=255) tGCAAGCGTGGTGCAGCGCCGGGCCCAGCCAGCGCGGCACCCACGCGTTTAAGGCCCGGCTGGAGCGCCCGGTCAACTACCGGGCCCTTTCGCGGGCATAGCTGTCGGTCAATCCCGCGCTGAAGTAGATCAATCGCAAGGATGCGCtgt > 2:3812861/1‑150 (MQ=255) tggtgCCGCGCCTGGCCGCGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGGCGCTGTGCAACGAg < 1:2281150/150‑1 (MQ=255) tggtgCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGGCGCTGTGCAACGAg < 2:3444839/150‑1 (MQ=255) tggtgCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGGCGCTGTGCAACGAg < 2:2282119/150‑1 (MQ=255) gCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGGCGCTGTGCAACGAGGCAt < 1:3269386/150‑1 (MQ=255) cAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGAGGAAGTCGATCATGCGCAGGACGGCGCTGTGCAACGGGGCATg > 2:1380703/1‑150 (MQ=255) aGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAACTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGGCGCTGTGCAACGAGGCATGc > 2:2480018/1‑150 (MQ=255) gcgcCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGGCGCTGTGCAACGAGGCATGCg > 2:69855/1‑150 (MQ=255) cgcCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGGCGCTGTGCAACGAGGCATGCgg < 2:164091/150‑1 (MQ=255) tGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGGCGCTGTGCAACGAGGCATGCGGGTCt < 1:4105954/150‑1 (MQ=255) | TTACAAGATAAAACAAAATGGGCTACGGAATAGGTGTGCTTAACTCGCTGTCAAAGCGATTTTGGTAACTTTTCATTAGTTTTTATTCGTGCCGTTTAGTGTGGCCCCGTTGGTGTAGGAAGTTTCCTGCAAGCGTGGTGCAGCGCCTGGCCGAGCCTGCGCTGCACCGACGCGTTTCAGGCCGGGCTGGAGCGCCCGGTCATCTCCCGGGCCATTTCGCTGGCATAGCTGTCGGTCATGCCGGCGATGAAGTCGATCATGCGCAGGAAGGCGCTGTGCAACGAGGCATGCGGGTCT > NC_002947/2402346‑2402642 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |