| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,463,671 | G→T | 5.6% | A235A (GCG→GCT) | lolC → | lipoprotein releasing system transmembrane protein LolC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,463,671 | 0 | G | T | 5.6% | 616.8 / 18.3 | 179 | A235A (GCG→GCT) | lolC | lipoprotein releasing system transmembrane protein LolC |
| Reads supporting (aligned to +/- strand): ref base G (73/96); new base T (5/5); total (78/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 192 total aligned reads displayed.
TTCACCGTGGTTGGCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCGTGGCGGTG > NC_002947/2463522‑2463818 | tCACCGTGGTTGGCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTACCAGgcgc > 2:1650349/1‑150 (MQ=255) cACCGTGGTTGGCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGcgcc > 2:3268560/1‑150 (MQ=255) tGGTTGGCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGTCCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGcgccaactg < 2:2469874/150‑6 (MQ=255) gtgggCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGCCCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTa < 2:3585530/147‑1 (MQ=255) gTTGGCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTa < 2:76014/150‑1 (MQ=255) ttGGCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAg < 1:2919203/150‑1 (MQ=255) ggCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTa < 2:2091564/147‑1 (MQ=255) ggCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTa > 1:2091564/1‑147 (MQ=255) gCACCTTCCACGTGGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCt < 2:3690097/150‑1 (MQ=255) cACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTg < 2:1177844/150‑1 (MQ=255) cACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTg < 2:3959655/150‑1 (MQ=255) cTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAg < 1:3874262/150‑1 (MQ=255) ttCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGc > 2:3108274/1‑150 (MQ=255) ttCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGc > 2:4037625/1‑150 (MQ=255) tCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCTACGCGCGGCGCCTGGAACa < 2:232525/150‑1 (MQ=255) tCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGCTCCAGGCTACGCGCGGCGCCTGGAACa < 2:4291357/150‑1 (MQ=255) tCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGCTCCAGGCTACGCGCGGCGCCTGGAACa < 1:614172/150‑1 (MQ=255) cACGTGGGCGCGGGGGAGCTCGACGGCTACCTGGGCCTGACCAACATCCGCGACCTGTCCCGCCAGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCAGGAGCATc < 2:2036979/150‑1 (MQ=255) aCGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCg > 2:1851321/1‑150 (MQ=255) aCGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCg < 2:2523879/150‑1 (MQ=255) gcgcGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCcagc > 2:650799/1‑150 (MQ=255) gggAGATCGACTGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTgg < 1:3496230/150‑1 (MQ=255) gggAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTgg < 2:4441381/150‑1 (MQ=255) gaTCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGa < 1:826453/150‑1 (MQ=255) aTCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGAc < 1:3848498/150‑1 (MQ=255) tCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGAcc < 2:4268114/150‑1 (MQ=255) tCGACGGCTACCTGGGACTGACCAACATAAGCTACCTGTCCCGCCTGCACCGCTGGAAGACAGACCAGGTCAAGGGCCTGAGCCTGAAGATCGACGACCTGTTCCAGGCGACCCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGAcc > 2:1651228/1‑150 (MQ=255) cGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCa < 2:1081309/150‑1 (MQ=255) gACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAg < 1:373077/150‑1 (MQ=255) ggCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGaa > 1:1839957/1‑150 (MQ=255) gCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAAt < 1:1005830/150‑1 (MQ=255) cgaCCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAAtt < 2:3404377/148‑1 (MQ=255) cTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAAtt < 1:3108274/150‑1 (MQ=255) cTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAAtt > 1:388323/1‑150 (MQ=255) ccTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCCGCAGCTGGGCGACCCGGAATTCta > 2:3285722/1‑150 (MQ=255) ccTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCta < 1:410147/150‑1 (MQ=255) cTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCtat < 1:301127/150‑1 (MQ=255) gggCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAg < 2:238373/150‑1 (MQ=255) tGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTg > 2:1812400/1‑150 (MQ=255) tGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTg > 2:1748133/1‑150 (MQ=255) gACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGa < 1:1040391/150‑1 (MQ=255) aCCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGAc > 2:2800428/1‑150 (MQ=255) aaCATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTgg > 1:2331688/1‑150 (MQ=255) aaCATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTgg > 1:3563858/1‑150 (MQ=255) aCATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGa > 1:47290/1‑150 (MQ=255) cATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGAc < 1:3227504/150‑1 (MQ=255) tCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGAccc > 2:3760946/1‑150 (MQ=255) aGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGt < 1:2012162/150‑1 (MQ=255) cGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTAc > 2:1266618/1‑150 (MQ=255) cGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTAc > 1:3569478/1‑150 (MQ=255) cTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGACGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCAc > 1:1562804/1‑150 (MQ=255) cTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCCGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCAc > 1:803348/1‑150 (MQ=255) cTGTCCCGCCCGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCAc < 1:4224062/150‑1 (MQ=255) gTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACgg > 1:1191478/1‑150 (MQ=255) ccGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCaa > 1:2298944/1‑150 (MQ=255) cGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAAc < 1:1780309/150‑1 (MQ=255) ccTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCt > 1:2827124/1‑150 (MQ=255) gCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTa < 1:2604921/150‑1 (MQ=255) cACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTAc < 1:3268560/150‑1 (MQ=255) aCCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTAcc < 2:1905504/150‑1 (MQ=255) ccGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCa < 2:2750366/150‑1 (MQ=255) cGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAAACTGTACCAg > 1:1939538/1‑150 (MQ=255) gAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGAt > 1:2750485/1‑150 (MQ=255) gCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCg > 1:3641674/1‑150 (MQ=255) gCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGGAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCg < 1:1406415/150‑1 (MQ=255) cGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTAt < 2:3667100/150‑1 (MQ=255) cGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGGAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTAt < 1:475832/150‑1 (MQ=255) gACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGGGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGTTCCGTATg < 2:3626531/150‑1 (MQ=255) aCCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATgg > 2:3796608/1‑150 (MQ=255) ggTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGaaaa < 1:983643/150‑1 (MQ=255) ggTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGaaaa < 2:3563858/150‑1 (MQ=255) ggTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGaaaa > 2:3114780/1‑150 (MQ=255) ggTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGGGCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGaaaa < 2:2958536/150‑1 (MQ=255) gTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCACGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCAGTATGGAAAAg > 1:3029003/1‑150 (MQ=255) cAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGcc > 1:3973644/1‑150 (MQ=255) ggCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATg > 2:2854062/1‑150 (MQ=255) cTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATc < 2:1777453/150‑1 (MQ=255) ccTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCct < 2:3027158/150‑1 (MQ=255) gTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGt > 2:1359164/1‑107 (MQ=255) gTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGt < 1:1359164/107‑1 (MQ=255) ttCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGTAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTtg < 1:3860643/150‑1 (MQ=255) ttCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTtg > 2:3537008/1‑150 (MQ=255) ttCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTtg < 1:1739422/150‑1 (MQ=255) cgacgaCCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTtgct < 1:418150/150‑1 (MQ=255) cgacgaCCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTAGAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTtgct < 2:790412/150‑1 (MQ=255) gacgacCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGACAAGGCCATGATCGGCCTGCTGTtgctg > 2:3917112/1‑150 (MQ=255) gacgacCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTtgctg > 2:974364/1‑150 (MQ=255) gacgacCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTtgctg < 2:1799724/150‑1 (MQ=255) cgacCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTgctgct < 1:650799/150‑1 (MQ=255) ttCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCgtg > 2:2824855/1‑150 (MQ=255) tCCAGGCTACGCGCGGCGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCgtgg > 2:3477972/1‑150 (MQ=255) tCCAGGCTACGCGCGGCGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCgtgg > 2:158069/1‑150 (MQ=255) tCCAGGCTACGCGCGGCGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCgtgg > 2:1113884/1‑150 (MQ=255) ccAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCgtggc < 2:2482820/150‑1 (MQ=255) cAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCgtggcg > 2:2403387/1‑150 (MQ=255) cAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCgtggcg > 2:396686/1‑150 (MQ=255) aGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCgtggcgg > 1:897510/1‑150 (MQ=255) aGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCgtggcgg > 1:2292089/1‑150 (MQ=255) gcgcCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCgtggcggtg < 2:2318655/150‑1 (MQ=255) gcgcCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCgtggcggtg < 2:1994748/150‑1 (MQ=255) | TTCACCGTGGTTGGCACCTTCCACGTTGGCGCGGGGGAGATCGACGGCTACCTGGGCCTGACCAACATCAGCGACCTGTCCCGCCTGCACCGCTGGAAGCCCGACCAGGTCCAGGGCCTGCGCCTGAAGTTCGACGACCTGTTCCAGGCGCCGCGCGTAGCCTGGAGCATCGCCCAGCAGCTGGGCGACCAGGAATTCTATAGCCGTGACTGGACCCGTACCCACGGCAACCTGTACCAGGCGATCCGTATGGAAAAGGCCATGATCGGCCTGCTGTTGCTGCTGATCGTGGCGGTG > NC_002947/2463522‑2463818 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |