| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,592,042 | G→C | 6.0% | A42P (GCG→CCG) | PP_2267 → | single‑stranded DNA‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,592,042 | 0 | G | C | 6.0% | 628.8 / 23.2 | 184 | A42P (GCG→CCG) | PP_2267 | single‑stranded DNA‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (83/89); new base C (5/6); total (88/96) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.56e-01 | |||||||||||
Only 100 of 200 total aligned reads displayed.
ATCAGAAACGCCCAAAGAACGTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCGAGGAGTACGACAAGGAGACC > NC_002947/2591893‑2592191 | aTCAGAAACGCCCAAAGAACGTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAggcgg > 2:545782/1‑150 (MQ=255) aGAAACGCCCAAAGAACGTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGgcgc > 2:67721/1‑150 (MQ=255) aCGCCCAAAGAACGTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAggcggagtcgta < 2:1744081/150‑8 (MQ=255) cGCCCAAAGAACGTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGCCGCctctt < 2:1223286/150‑2 (MQ=255) cccAAAGAACGTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCt < 2:1295016/150‑1 (MQ=255) cccAAACAAACTAACCATCACCACCCCGCGACCCATTTACCGCAACCCCCCACACACCAAACCACACTTCCCCACCCAAGAGAACCCGAACCCGGACGCAGACTACAAACTCACCCTGATCCTGACCCAAGAAGACGCGCCCCCTCTACt < 2:3129120/150‑1 (MQ=255) ccAAAGAACGTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGGAGAGGCGCCGCCtcttctt < 1:146782/150‑2 (MQ=255) ccAAAGAACGTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTg > 2:834423/1‑150 (MQ=255) ccAAAGAACGTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGCCGCCtcttctt < 1:413109/150‑2 (MQ=255) aaaGAACGTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGc > 1:382687/1‑150 (MQ=255) aaaGAACGTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGc > 1:3155148/1‑150 (MQ=255) aaaGAACGTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGc > 2:781648/1‑150 (MQ=255) aaGAACGTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGCCGCCtcttcttggg < 1:1011205/150‑5 (MQ=255) aCGTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGc > 1:208125/1‑150 (MQ=255) gTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTg < 2:2426195/150‑1 (MQ=255) gTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTg > 1:2986980/1‑150 (MQ=255) tAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTgg > 1:2219940/1‑150 (MQ=255) tAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTgg < 1:2821529/150‑1 (MQ=255) aaCCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGa > 2:3038280/1‑150 (MQ=255) ccATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAAc < 2:2171967/150‑1 (MQ=255) cATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAAcc > 1:3578913/1‑150 (MQ=255) aTGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCg > 1:1375979/1‑150 (MQ=255) tGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGc > 2:163794/1‑150 (MQ=255) gACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCt < 1:3091628/150‑1 (MQ=255) gACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCt < 1:3498906/150‑1 (MQ=255) ccTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGc < 1:871090/150‑1 (MQ=255) tCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCAc > 1:3877091/1‑150 (MQ=255) ccgcGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGaa > 2:4394444/1‑150 (MQ=255) gcgTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCAGGCGAAGCTGGAACCGCTGCACGAAgc > 1:1051891/1‑150 (MQ=255) tGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAgccgc < 1:2504806/150‑1 (MQ=255) tGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAgccgc > 2:3978344/1‑150 (MQ=255) cATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCAt < 1:1828799/150‑1 (MQ=255) ttttCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCg < 2:4417880/150‑1 (MQ=255) ccGCGACCCGGCACTGACCCCACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGaa < 2:4179156/150‑1 (MQ=255) cGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAAt > 2:641264/1‑150 (MQ=255) ccGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGt > 2:961115/1‑150 (MQ=255) ccGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGt > 2:2152510/1‑150 (MQ=255) gCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGaa < 2:3566644/150‑1 (MQ=255) gCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGaa < 1:100080/150‑1 (MQ=255) aCTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAaga < 1:898105/150‑1 (MQ=255) aCTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAaga < 2:1361205/150‑1 (MQ=255) ccAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCa > 2:873152/1‑150 (MQ=255) cAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCTCGATGCCGCCATCGAGAATGGCCGTGAGGAGTTCag > 1:2045283/1‑149 (MQ=255) cAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCaa > 2:3400853/1‑150 (MQ=255) cAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCaa > 1:3565913/1‑150 (MQ=255) cAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCaa > 1:467418/1‑150 (MQ=255) cAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCaa > 1:1985495/1‑150 (MQ=255) aaaCCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCaag < 1:2417652/150‑1 (MQ=255) cTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGc < 1:2732847/150‑1 (MQ=255) tGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCt > 2:989970/1‑150 (MQ=255) cTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCaa < 1:3399087/150‑1 (MQ=255) cTTCGGCACCGATGAGGACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCaa < 2:2092124/150‑1 (MQ=255) ggCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATc > 1:825397/1‑150 (MQ=255) aCCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGaa < 2:1616642/150‑1 (MQ=255) aCCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGaa < 1:67721/150‑1 (MQ=255) gAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGc > 1:4234064/1‑150 (MQ=255) gTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCaa > 1:1739037/1‑150 (MQ=255) gTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCaa < 1:2806316/150‑1 (MQ=255) tACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCaag < 2:3630766/150‑1 (MQ=255) aCCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCaaga < 2:2870560/150‑1 (MQ=255) ccGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCaagaag < 1:3465717/150‑1 (MQ=255) gAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCt < 2:2949799/150‑1 (MQ=255) gAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCt < 2:1373807/150‑1 (MQ=255) gCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGaa < 2:1991317/150‑1 (MQ=255) ccGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGaaa > 2:2579912/1‑150 (MQ=255) ccGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGaaa < 1:1769690/150‑1 (MQ=255) ccGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGaaa < 2:3672589/150‑1 (MQ=255) gACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGAc < 1:1905513/150‑1 (MQ=255) gACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGAc < 1:3752594/150‑1 (MQ=255) cGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGt < 2:626077/150‑1 (MQ=255) ggTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTa < 1:520257/150‑1 (MQ=255) gTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCGGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTaa < 2:1208659/150‑1 (MQ=255) tGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAAc > 2:603571/1‑150 (MQ=255) gAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAAcc > 2:3190997/1‑150 (MQ=255) tACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGcc < 2:4358083/91‑1 (MQ=255) tACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGcc > 1:4358083/1‑91 (MQ=255) aCAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGc < 1:4332889/150‑1 (MQ=255) aCAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGc > 1:4173549/1‑150 (MQ=255) cAAAGTCACCCTGATCCTGACCCAAGTAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGTAGAGTTCAAGAAGCTCAAGTTCGACGCCCGCAAGAAGCTGAAAGACGTTACCGTGcg > 2:1949899/1‑149 (MQ=255) aaaGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAg > 2:1037698/1‑150 (MQ=255) aaGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGc < 2:1866538/150‑1 (MQ=255) aaGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGc > 2:3855290/1‑150 (MQ=255) tCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGc < 1:603571/150‑1 (MQ=255) cTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTc > 2:4118908/1‑150 (MQ=255) cTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCgag < 1:4434038/150‑1 (MQ=255) cTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCgag < 1:3038348/150‑1 (MQ=255) gACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCgagga < 1:4426769/150‑1 (MQ=255) cAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCGAGGAGTAc < 1:1203560/150‑1 (MQ=255) caggagagGCGCCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCGAGGAGTACg > 2:4035451/5‑150 (MQ=255) caggagagGCGCCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCGAGGAGTACg > 1:988260/5‑150 (MQ=255) agaagaGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCGAGGAGTACGa > 2:2419782/1‑150 (MQ=255) ggagagGCGCCGCCTCTTCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCGAGGAGTACGAc > 1:939389/3‑150 (MQ=255) gagGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCGAGGAGTACGACAAg < 1:3139178/150‑1 (MQ=255) gagGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCGAGGAGTACGACAAg < 2:2219940/150‑1 (MQ=255) agGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGACTGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCGAGGAGTACGACAAgg > 2:474863/1‑150 (MQ=255) agGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCGAGGAGTACGACAAgg < 2:208125/150‑1 (MQ=255) ggcggcGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCGAGGAGTACGACAAGga < 1:2966017/150‑1 (MQ=255) gcggcgCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCGAGGAGTACGACAAGgag > 2:3759600/1‑150 (MQ=255) cggcgCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCGAGGAGTACGACAAGgaga < 2:4157861/150‑1 (MQ=255) gcgcCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCGAGGAGTACGACAAGGAGAcc < 2:1475812/150‑1 (MQ=255) | ATCAGAAACGCCCAAAGAACGTAACCATGACCTCGCCGCGTGGCATTTTCCGCTACCCGGCACTGACCAAACCTGACTTCGGCACCGATGAGTACCCGAAGCCGGACGGTGAGTACAAAGTCACCCTGATCCTGACCCAAGAAGAGGCGGCGCCTCTCCTGGCGAAGCTGGAACCGCTGCACGAAGCCGCCATCGAGAATGGCCGTGAAGAGTTCAAGAAGCTCAAGATCGAAGCCCGCAAGAAGCTGAAAGACGTAACCGTGCAGCCGCTCTTCACCGAGGAGTACGACAAGGAGACC > NC_002947/2591893‑2592191 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |