| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,709,012 | G→T | 5.9% | intergenic (+16/+31) | PP_2369 → / ← PP_2370 | leucine‑rich repeat‑containing protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,709,012 | 0 | G | T | 5.9% | 516.5 / 12.9 | 153 | intergenic (+16/+31) | PP_2369/PP_2370 | leucine‑rich repeat‑containing protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (56/87); new base T (4/6); total (60/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 180 total aligned reads displayed.
TCGAACAATCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGAATGCGT > NC_002947/2708863‑2709161 | tCGAACAATCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCccgccg > 2:1689926/1‑150 (MQ=255)tCGAACAATCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCccgccg > 2:1773286/1‑150 (MQ=255)tCGAACAATCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCccgccg > 2:2055684/1‑150 (MQ=255)tCGAACAATCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCccgccg > 1:1814368/1‑150 (MQ=255)tCGAACAATCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCccgccg > 1:1776147/1‑150 (MQ=255) aaCAATCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCgaga > 1:742018/1‑150 (MQ=255) aaCAATCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCgaga > 1:208300/1‑150 (MQ=255) aaCAATCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCgaga < 2:1854311/150‑1 (MQ=255) aaCAATCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCgaga > 1:1882894/1‑150 (MQ=255) cAATCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAgg < 2:1017712/150‑1 (MQ=255) aTCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCg < 2:896186/150‑1 (MQ=255) tCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCgg < 2:1804266/150‑1 (MQ=255) tCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCgg > 1:3393875/1‑150 (MQ=255) aaaaCGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCt > 1:1818355/1‑150 (MQ=255) aaCGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCTCTCGGCGGGCTGt < 1:2048638/150‑1 (MQ=255) aaCGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCTCTCGGCGGGCTGt < 2:774022/150‑1 (MQ=255) cTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCTCTCGGCGGGCTGtttcg < 2:3354688/150‑4 (MQ=255) aGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTTAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTgg < 1:2518842/150‑1 (MQ=255) aTGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCg < 2:398815/150‑1 (MQ=255) gACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACg > 1:2660986/1‑150 (MQ=255) cTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGAt < 1:3595964/150‑1 (MQ=255) tATTTTGCCCAGGTCGAGCATATCTGCGCCGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATc < 1:1708345/150‑1 (MQ=255) tATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATc < 1:1461140/150‑1 (MQ=255) tATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATc > 1:3243072/1‑150 (MQ=255) ttttGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAg < 1:1424133/150‑1 (MQ=255) ttttGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAg > 1:2911616/1‑150 (MQ=255) ttGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAgcg < 2:4320629/150‑1 (MQ=255) ccAGGTCGAGCATATCTGCGCAGCGCGTGTGGTCGCGAAAGGGCAGCTTTTGCTTGAGTTGTGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCTAGAGGGGGGCTGTTCGCTGGGGCGGGACGATCAgcggcgg < 1:875869/150‑1 (MQ=255) ccAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAgcggcgg > 1:2158517/1‑150 (MQ=255) ccAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAgcggcgg > 2:4099961/1‑150 (MQ=255) cAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAgcggcggc < 2:2989528/150‑1 (MQ=255) ggTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGcggcggcgg > 1:1042981/1‑150 (MQ=255) gAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAAca > 1:2765576/1‑150 (MQ=255) gCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAAcagc < 1:2506143/150‑1 (MQ=255) tCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAAcagcggcag < 1:4102829/150‑1 (MQ=255) tGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAAcagcggcagcg > 1:1298164/1‑150 (MQ=255) gcgcAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGAGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAAcagcggcagcgg > 1:560450/1‑150 (MQ=255) cgcAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGCGGCAATCCAGCGCCACGGCCTGTTAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGt < 1:3806169/150‑1 (MQ=255) cAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTtc < 2:3752210/150‑1 (MQ=255) gcgcGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTtcgt < 1:3254102/150‑1 (MQ=255) cgcgTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTtcgtc < 1:3495412/150‑1 (MQ=255) cgcgTGAGGTCGCGAAACGGCAGATTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTtcgtc < 1:2470690/150‑1 (MQ=255) gcgTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTtcgtcg > 2:3178813/1‑150 (MQ=255) gcgTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTtcgtcg > 1:2405401/1‑150 (MQ=255) gcgTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTACGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTtcgtcg > 2:3857292/1‑150 (MQ=255) gcgTGAGGTCGCGAAACGGCAGCTTTTGCGTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTtcgtcg > 1:2405473/1‑150 (MQ=255) gTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTggcgg > 1:4404979/1‑150 (MQ=255) gcgAAACGGCCGCTTTTGCTTGAGTTGAGCCGTGCGGCAATCCAGCGCCACGGCCTGTGAACGAAACCGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCt < 1:1681307/150‑1 (MQ=255) gcgAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCt < 2:2300132/150‑1 (MQ=255) gAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTgg > 1:1783432/1‑150 (MQ=255) aaaCGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGt < 1:3521448/150‑1 (MQ=255) aaCGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTa < 1:2269659/150‑1 (MQ=255) aCGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAg < 1:1426626/150‑1 (MQ=255) gCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCAcc > 2:333713/1‑150 (MQ=255) gCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCAcc < 1:1272617/150‑1 (MQ=255) ttttGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCga > 1:1056639/1‑150 (MQ=255) ttGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCgaga < 2:30443/150‑1 (MQ=255) tGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGaa < 2:4068890/150‑1 (MQ=255) tGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGaa < 2:1197298/150‑1 (MQ=255) ttgagttgagCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTc > 2:2489392/1‑150 (MQ=255) ttgagCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCa < 2:1511757/150‑1 (MQ=255) ttgagCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCa < 2:2917283/150‑1 (MQ=255) ggCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAgc > 1:3583567/1‑150 (MQ=255) ggCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAgc < 2:4425429/150‑1 (MQ=255) ggCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAgc > 1:3584009/1‑150 (MQ=255) cAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAgcgc < 2:1636832/150‑1 (MQ=255) aaTCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTGTGCAGcgcg > 2:274538/1‑150 (MQ=255) aaTCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTACAGGCTTTGCAGcgcg > 2:1379211/1‑150 (MQ=255) ccAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCt > 1:4423634/1‑150 (MQ=255) gcgcCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGGTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTcc < 2:1882894/150‑1 (MQ=255) gcCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCgg < 2:358705/150‑1 (MQ=255) ccACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCggg > 2:3016983/1‑150 (MQ=255) aCGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTc < 2:3940174/150‑1 (MQ=255) cGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTcc < 2:742018/150‑1 (MQ=255) cGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTcc < 2:3217632/150‑1 (MQ=255) gCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCTCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCtt < 2:635242/150‑1 (MQ=255) gCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCTCTGGGGCGGGACGACCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCtt < 2:635097/150‑1 (MQ=255) gCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGTGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCtt < 1:3085668/150‑1 (MQ=255) gCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCtt > 2:4029869/1‑150 (MQ=255) tgtgAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTc < 1:4343059/150‑1 (MQ=255) tgAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCgg > 1:1543806/1‑150 (MQ=255) aaCGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCtt < 1:1212249/120‑1 (MQ=255) aaCGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCa > 2:2767299/1‑150 (MQ=255) agcgaaCAGCCCGCCTCTCGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCAc > 1:2629667/5‑150 (MQ=255) aCGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCAc < 2:941086/150‑1 (MQ=255) cGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACg > 1:2815593/1‑150 (MQ=255) cGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCGTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACg > 2:1701515/1‑150 (MQ=255) gaaCAGCCCGCCTCTCGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGa > 2:1560283/2‑150 (MQ=255) gaaCAGCCCGCCTCTCGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGa > 2:108834/2‑150 (MQ=255) cAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATgg > 2:2853698/1‑150 (MQ=255) aGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGTGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGc < 1:1544647/150‑1 (MQ=255) aGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGc < 1:954538/150‑1 (MQ=255) cccGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGa < 2:4191754/150‑1 (MQ=255) ccgccgAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGaa < 2:1370422/150‑1 (MQ=255) ccgccgAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGaa > 2:881366/1‑150 (MQ=255) ccgccgAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCAGGGTCCTTGTCGGCACGGATGGCGaa > 1:3236915/1‑150 (MQ=255) cgccgAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGAAt > 2:1968418/1‑150 (MQ=255) cgccgAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGAAt < 1:1689920/150‑1 (MQ=255) gagaGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGAATGCGt < 1:1824434/150‑1 (MQ=255) gagaGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGAATGCGt < 2:1818355/150‑1 (MQ=255) | TCGAACAATCGAAAACGCTGAGTGATGGCGACTATTTTGCCCAGGTCGAGCATATCTGCGCAGCGCGTGAGGTCGCGAAACGGCAGCTTTTGCTTGAGTTGAGCCGTGAGGCAATCCAGCGCCACGGCCTGTGAACGAAACAGCCCGCCGAGAGGCGGGCTGTTCGCTGGGGCGGGACGATCAGCGGCGGCGGAACAGCGGCAGCGGTTCGTCGGTGGCGGCCTGGTAGGTCACCGAGAAGTCCTTCAGGCTTTGCAGCGCGTCTTCCGGGTCCTTGTCGGCACGGATGGCGAATGCGT > NC_002947/2708863‑2709161 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |