| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,052,010 | G→A | 5.8% | intergenic (+17/‑124) | PP_2662 → / → PP_2663 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,052,010 | 0 | G | A | 5.8% | 390.3 / 11.0 | 139 | intergenic (+17/‑124) | PP_2662/PP_2663 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (48/80); new base A (5/3); total (56/83) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.90e-01 | |||||||||||
Only 100 of 148 total aligned reads displayed.
GCTGTTCCATGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTCATAACGACGGT > NC_002947/3051861‑3052157 | gcTGTTCCATGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAg < 2:1144769/150‑1 (MQ=255)gcTGTTCCATGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAg < 2:1144770/150‑1 (MQ=255) cTGTTCCATGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAgg < 1:4352992/150‑1 (MQ=255) ttCCATGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAggcgg > 2:1237139/1‑150 (MQ=255) ccATGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGGCCCGAGGCGGcc > 1:232057/1‑150 (MQ=255) cATGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGccc < 1:1106148/150‑1 (MQ=255) aTGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGGCGCGAGGCGGcccc > 1:898872/1‑150 (MQ=255) aTGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCCTAGCGGcccc < 2:2946478/150‑1 (MQ=255) aTGACACCAACGACACCCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCCTAGCGGcccc < 1:2734028/150‑1 (MQ=255) gACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGa < 2:121018/150‑1 (MQ=255) acctCACCGACACCCGGAACCTGGTGGCCGAGTACCACCAGTTGTCCATCGCCGGGCATGACCCCAGTGCGCCGAACGAAGACCCCGCTACCTTTGCGGTGGGCGCGGTGTTGACCTGGTCCGCGGCCGGGGCCGCTAGGCGGCCCCGat < 2:715278/147‑2 (MQ=255) aCATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGaa < 1:461977/150‑1 (MQ=255) aCATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGaa < 1:3548436/150‑1 (MQ=255) cATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAAt < 2:2355379/150‑1 (MQ=255) aTCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCAAGGCGGCCCCGCATg > 2:3233636/1‑150 (MQ=255) cAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGac < 2:1675638/150‑1 (MQ=255) aaCGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCCAATGaaa > 2:1567975/1‑148 (MQ=255) gACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCGAGGCGGCCCCGAATGACACgg > 2:638048/1‑150 (MQ=255) aCAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAAAGACACggg > 2:525838/1‑149 (MQ=255) aaCCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCAACGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCt < 2:984632/150‑1 (MQ=255) ccTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGGCGCTAGGCGGCCCCGAATTAAACGGTGttt > 1:2988207/1‑150 (MQ=255) ccTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCGAGGCGGCCCCCCATGacaccggcatt > 1:2572852/1‑143 (MQ=255) cTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCtttt < 1:3255024/150‑1 (MQ=255) cTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCGAGGCGGCCCCCAAAGACACCGTCtttt > 2:844674/1‑150 (MQ=255) aaaCTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACg < 2:1639940/150‑1 (MQ=255) tggtggCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCa < 2:3824528/150‑1 (MQ=255) ggtggCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCAt > 2:2380844/1‑150 (MQ=255) gtggCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGGCGCAAGGCGGCCCCCAAAGAAACCCTCGTTTAAGCCCaag > 1:1317978/1‑148 (MQ=255) tggCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAAAGACACGGTCTTTTAAGCCCATgg > 2:4411108/1‑150 (MQ=255) aGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGc < 1:830727/150‑1 (MQ=255) tACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGccc < 2:1578506/150‑1 (MQ=255) aCAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCa < 1:2128851/150‑1 (MQ=255) aaCCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCGTTTACGCCCATGGAACCGcccccc > 2:4477788/1‑150 (MQ=255) aaCCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCGAGGCGGCCCCCAAAGAAACCGTCTTTTAAGCCCAAGGAACCGCCCAcc > 1:3653950/1‑150 (MQ=255) aCCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCAccc < 1:4163043/150‑1 (MQ=255) cAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCAGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGc > 1:734156/1‑150 (MQ=255) aGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCt < 1:2754392/150‑1 (MQ=255) gTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTa < 1:794984/150‑1 (MQ=255) ttCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTAccc < 2:4195619/150‑1 (MQ=255) ccATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCaa < 1:1665531/150‑1 (MQ=255) cATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGAGGTGGTCGCGGTGTTGACCTGGTAAGCGGCCGGGGGCGCGATGGGGCCCCCAACTACCCCGTGGAATAAGCCCAAGGACCCGCCCACCCCCAACACaac > 2:1526351/1‑149 (MQ=255) aTCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATTAAACGGTGTTTTAAGCCCCTGGAACCGCCCACCCCCAAACCaact > 2:2680797/1‑148 (MQ=255) tCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTa < 2:3837203/150‑1 (MQ=255) tCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCCCGAGGCGGCCCCCAAAGACACCGGCATTTACGCCCAAGGAACCCCCCCCCCCCAACCCAACTa > 1:4129724/1‑150 (MQ=255) ggCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTc < 1:1970794/150‑1 (MQ=255) ggCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCCAATGAAACCGTCTTTTTCGCCCAAGGAACCGCCCACCCCCAACCCAACTAGCATTc > 2:3136805/1‑150 (MQ=255) ggCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCGAGGCGGCCCCCCATGACACCGTCTTTTAAGCCCAAGGAACCCCCCACCCCCTACCCCAGGAGCATTc > 2:3136686/1‑150 (MQ=255) cATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGt < 2:1640964/150‑1 (MQ=255) cATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCCGCCCCGAAAGACACCGTCTTTTAAGCCCAATGAACCGCCCACCCGCAACCCAACTAGCaatagt > 1:3372437/1‑145 (MQ=255) acacCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTcacc < 1:2277168/150‑1 (MQ=255) acCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCCCTAGGCGGCCCCCAATGACACCGTGTTTTACGCCCAAGGAACCGCCCCCCCCCTACCCAAGTAGCAATAGTcaccca > 2:2426329/1‑150 (MQ=255) acCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCCCGAGGCGGCCCCCAAAGACACCGTCTTTTAAGCCCAAGGAACCCCCCACCCCCAAACCAACTAGCAATAGTcaacca > 2:2426315/1‑150 (MQ=255) aGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACccacca < 1:4188761/150‑1 (MQ=255) gcAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGGCGCGGGGCGGCCCCCCAGGGCACGGGGTTTTTAGCCCCGGGAACCGCCCACCCCCGACCCCAGTAGCAATCGTCAcccacccccacc > 1:1045039/1‑150 (MQ=255) gcAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCaccaccacc < 1:1695102/150‑1 (MQ=255) gcAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCCCATGAAAACGGCGTTTAAGCCCCAGGAACCCCCCACCCCCGCCCCAAGGAGCAATAGTCAACCcacaccccc > 1:1419541/1‑150 (MQ=255) gcAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCCCGAGGCGGCCCCGCATGTCACGGTCTTTTAAGCCCAAGGAACCCCCCCCCCCCGACCCAAATATCAATCGTCACCCcccaccacc > 1:4503903/1‑150 (MQ=255) aaCGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGGCCCGAGGCGGCCCCCAAAGACACCGTCTTTTAAGCCCCAGGTAACCCCCACCCCCGAACCAAGTAGCCTTAGAGACCCACCCCCaccaccg > 1:726561/1‑149 (MQ=255) aaCGAAGACACCGATACCATTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCAcctatg < 2:4235176/150‑4 (MQ=255) cGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTa < 1:926850/150‑1 (MQ=255) acacCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTg < 2:3947224/150‑1 (MQ=255) acacCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTg < 1:3135384/150‑1 (MQ=255) acacCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTg < 2:2541831/150‑1 (MQ=255) cccGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGAt < 1:2609684/149‑1 (MQ=255) ccGATACCTTTGCGGTGGGCGCGGTGTTGACCTGTTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATc < 1:2161531/150‑1 (MQ=255) aCCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCa < 1:1722688/150‑1 (MQ=255) ttGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCGAGGCGGCCCCGAAAGACAAGGGGGTTTACGCCCCAGGAACCCCCCCCCCCCGACCCAAGTAGCCGTAGGCACCCACCACCACCGCCCTAAAAAGATCACACAGCCa > 2:94350/1‑150 (MQ=255) gCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACTCCCATGGAACCTCCCACCCGCTACCCCAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATGACTCAGCCAcc < 2:2052895/150‑1 (MQ=255) gggCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCGAGGCGGCCCCGCATGACACGGTCATTTAAGCCCATGGAACCGCCCACCCGCTACCCCAGTAGCAGTCGGCACCCACCACCACCACCGTAAACTGATCACTCAGCCACCCCggg > 2:1048592/1‑148 (MQ=255) gcgGTGTTGACCTGGTAAGCGGCCGGGGCCGCGAGGCGGCCCCCCATGACACCGTCTTTTACGCCCCTGGCACCCCCCCCCCCCGACCCCACGAGCATTCGTCCCCCCCCCCCACCACCATAAAAAGATCACACACCCACCCccggccgg > 2:3208881/1‑150 (MQ=255) cgGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGga < 2:1754905/150‑1 (MQ=255) cgGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGga < 1:1964124/150‑1 (MQ=255) gtgtTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGgaga < 1:992822/150‑1 (MQ=255) gtgtTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGgaga < 2:2100042/150‑1 (MQ=255) gtgtTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGgaga < 2:4368591/150‑1 (MQ=255) gtgtTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGgaga < 2:291389/150‑1 (MQ=255) gtgtTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGgaga < 2:4368702/150‑1 (MQ=255) gtgtTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGgaga < 1:1874020/150‑1 (MQ=255) gtgtTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTGAAACTGATCACTCAGCCACCCCGTGCCGgaga < 1:265929/150‑1 (MQ=255) gtgtTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACAACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGgaga < 1:4375826/150‑1 (MQ=255) tgtTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGAc < 2:4003734/150‑1 (MQ=255) ttGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCa < 2:2713179/150‑1 (MQ=255) gACCTGGTAAGCGGCCGGGGCCGCGAGGCGGCCCCGAATGACACCGGCGTTTACGCCCAAGGAACCCCCCCCCCCCGACCCCAGGGGCAGTCGGCACCCCCCACCACCCCCATAAAAAGATAACGCAGCCCCCCCCGGCCGCAGACCAcc > 2:1377806/1‑149 (MQ=255) ccTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGAt < 2:3606385/150‑1 (MQ=255) cTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATg < 1:3694296/150‑1 (MQ=255) tGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCCAAAGACACCGTAATTTAACCCCAAGTAACCGCCCACCCCCAAACCAAATAGCATTCGTAACCCACCACCACCACCATAAAAAGATCACACAGCCACCCCGTGCCGGAGACAAccaagc > 2:3371038/1‑145 (MQ=255) tAAGCGGCCGGGGCCGCTATGCGGCCCCCAAATAAACGGTGTTTTTAGCCCAAGGGACCCCCCCCCCCCGACCCAAGTAGCAATAGTCAACCACCACCACCGCCGTAAACAGATCACACACCCACCCCGGGCCGGAGAACACCATgccag > 2:3181278/1‑147 (MQ=255) aaGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATgcagca < 1:3523560/150‑1 (MQ=255) aaGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCCCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATgcagca < 1:2923672/150‑1 (MQ=255) gCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAgg < 2:898872/150‑1 (MQ=255) gCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAgg < 1:4080381/150‑1 (MQ=255) ttcGGGGCCGCCTAGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTc > 2:4414139/3‑150 (MQ=255) ccGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTCa < 2:1823929/150‑1 (MQ=255) cGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTCAt < 2:1155862/150‑1 (MQ=255) cGGGGCCGCCTAGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTCAt > 1:2042985/1‑150 (MQ=255) ggggCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTCATa > 1:2058556/1‑150 (MQ=255) gggCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTCATaa > 2:1688249/1‑150 (MQ=255) ccGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTCATAacga < 1:3242857/150‑1 (MQ=255) cGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTCATAacgac < 2:2528771/150‑1 (MQ=255) tAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTCATAACGACGgt > 1:114207/1‑150 (MQ=255) | GCTGTTCCATGACATCAACGACAACCTGAAACTGGTGGCCGAGTACAACCAGTTTTCCATCGACGGGCATGACACCAGTGCGCAGAACGAAGACACCGATACCTTTGCGGTGGGCGCGGTGTTGACCTGGTAAGCGGCCGGGGCCGCTAGGCGGCCCCGAATGACACGGTCTTTTACGCCCATGGAACCGCCCACCCGCTACCCAAGTAGCATTCGTCACCCACCACCACCTCCTTAAACTGATCACTCAGCCACCCCGTGCCGGAGACCACGATGCAGCAGGCTCATAACGACGGT > NC_002947/3051861‑3052157 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |