| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,321,097 | T→G | 5.3% | intergenic (‑96/+96) | treSA ← / ← PP_2919 | trehalose synthase A/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,321,097 | 0 | T | G | 5.3% | 349.1 / 2.3 | 125 | intergenic (‑96/+96) | treSA/PP_2919 | trehalose synthase A/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (48/66); new base G (7/2); total (55/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.65e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 127 total aligned reads displayed.
CATGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATT > NC_002947/3320951‑3321246 | cATGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGc > 2:2871258/1‑150 (MQ=255)cATGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGc < 2:1752866/150‑1 (MQ=255)cATGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTGGCGTGTCGGCACCGGCTCAGGTTACGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGc < 2:1753031/150‑1 (MQ=255) tGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGccc < 1:2780281/150‑1 (MQ=255) tGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGccc < 1:2781115/150‑1 (MQ=255) cgcgGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCt < 1:1564953/150‑1 (MQ=255) gcgGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCAAGCCCGcga < 2:3109551/150‑3 (MQ=255) gcgGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCAAGCCCGcga < 2:2086895/150‑3 (MQ=255) cgGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTcc < 2:3233853/150‑1 (MQ=255) gTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCca < 1:1847229/150‑1 (MQ=255) gTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCca < 1:1860219/150‑1 (MQ=255) gTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCca < 1:1542207/150‑1 (MQ=255) cTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCcaca < 1:3263114/150‑1 (MQ=255) ttCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCGTGCCCGCGCCCACAg > 2:586668/1‑150 (MQ=255) tCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAgg < 2:1769514/150‑1 (MQ=255) tCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAgg < 2:1769733/150‑1 (MQ=255) cGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCCCGCCCACACGc > 1:2014708/1‑150 (MQ=255) cGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGGCCGCACCCCCAGGc > 1:2727778/1‑150 (MQ=255) cGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGc < 2:751173/150‑1 (MQ=255) cGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGc < 2:2623466/150‑1 (MQ=255) gAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACTGGCg < 1:4499574/150‑1 (MQ=255) gAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCg < 1:3224575/150‑1 (MQ=255) aGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCCCAGGCgg > 2:2821581/1‑150 (MQ=255) gCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGa < 1:3088640/150‑1 (MQ=255) gCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGa < 1:152182/150‑1 (MQ=255) tttGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACACGCGGACATa > 1:3650290/1‑150 (MQ=255) aCGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGc < 2:763625/150‑1 (MQ=255) tATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGa < 2:2260201/150‑1 (MQ=255) aTGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACACGCCGCCAGACCGCGGaa > 2:1831945/1‑150 (MQ=255) aTGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCGCCCACAGGCGGGCCTACCGCGGaa > 1:4261867/1‑150 (MQ=255) tGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTGGCCCGCGCCCCCAGGCCGACCGACCGcccaat > 1:2608264/1‑145 (MQ=255) gACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGa > 2:2702043/1‑150 (MQ=255) aCGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGAt < 2:1590638/150‑1 (MQ=255) ggTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTg < 2:3214627/150‑1 (MQ=255) gTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACTGGGGGACCTACCGCAGAAGAGTTgc > 2:4478501/1‑150 (MQ=255) gTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTgc < 2:467142/150‑1 (MQ=255) tCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTgcg < 2:104985/150‑1 (MQ=255) ggCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCGGAAGGTTTGCGCTg > 2:1985011/1‑150 (MQ=255) ggCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCGTGCCAGCGCCCCCATGGCCACAATCCGCCGAAGGTTTgcgggg > 1:372604/1‑147 (MQ=255) tGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCAc < 2:4132486/150‑1 (MQ=255) gTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCGCCCCCACGGCGACCGACCGCGCAAGATTTGCGCGGCAcaag > 1:3654933/1‑147 (MQ=255) tCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCtgt < 1:551415/150‑1 (MQ=255) cccttccgcgGCCTCCCTGCGTGTCGGCACCGGCTCAGGTGATGCCGGCGCTGCGGCCTGAACGGTCGGCTCAAGAGGGGCGTTGGTTTCTTCGCGGGCGTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCtgt < 2:4001160/144‑1 (MQ=255) aggcggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCGCGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCtgtg > 2:291560‑M1/88‑150 (MQ=255) aggcggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCGCGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCtgtg > 1:2352820‑M1/88‑150 (MQ=255) aTTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTgg < 2:4240534/150‑1 (MQ=255) aTTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTgg < 2:4240303/150‑1 (MQ=255) ttCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGa < 2:1763443/150‑1 (MQ=255) cggtgcgcaattacttccatgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGa > 1:1427830‑M1/85‑150 (MQ=255) cgTACTCTTTGCGTGTCGGCTCCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATCCCGCTGAAGATTTGCGCTGCACCTGTGGGAGCgg < 2:2193683/150‑1 (MQ=255) gTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTGCCCCGCCCACAGGCCGCCATACCCCCGAAAAGTTGGGCTGCCCCAGTGGGAGCggg > 1:1975737/1‑150 (MQ=255) gTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACCTACCGCGGAAGATTTGCGCTGCACCGGGGGGGGCggg > 2:1587825/1‑150 (MQ=255) ctctTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCTCCCACAGGCCGACATACCGCGGAAGAATTGCGCTGCACCAGAGGATGCGGgcgc > 2:4495900/1‑150 (MQ=255) tctTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCTCCCAAACGCCGACCGACCGCAAAATGGTTGGGCTGCCCCATAGGGACCGGgcgcg > 1:321289/1‑150 (MQ=255) tttGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCGCCCACAGGCGGACATACCGCGGAAGATTTGCGCTGCACCGGTGGGAGCGGGCGCGcc > 2:3060899/1‑150 (MQ=255) tgtCGGCACCGGCTCTGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGaa < 1:207804/150‑1 (MQ=255) tgtCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGGGCCCCCACGCGGACCTACCCCCGAAGGGTTGCGCGGCACCAGGGGGAGCGGGCGCGCCcgcccc > 2:317911/1‑147 (MQ=255) tgatgcgtttctggcaccgcagcagttgtcggcccggcgctgatcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAaga > 1:3514990‑M1/66‑150 (MQ=255) tCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAaga < 2:4132584/150‑1 (MQ=255) tCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAaga < 2:1514181/150‑1 (MQ=255) tCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAaga < 2:3092318/150‑1 (MQ=255) cGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCGTGCCCCCGCCCACAGGCGGACAGTCCGCCGAAGATTTGCGGTGCACCAGTGGGGGCGGGCGGGCCcgcccacag > 1:2148173/1‑144 (MQ=255) gCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCACTCCCCCACGCCGACATACCGCGGAAAATTTGCGCTGCACCAGAGGGAGCGGGAGCGCCCGCGACCAGGc > 1:3309851/1‑150 (MQ=255) cTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCt < 2:1758399/150‑1 (MQ=255) tCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCGCTCCCCAAGGCCGACCTACCGCAGAATAGTTTCGCTGCACCAGTGGGTCCGGGCCCGCCCGCCAAAAGGCCGGGccag > 1:3309554/1‑148 (MQ=255) tCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCCCTCCCCCACGCCGACATACCGCGGAACTTTTGCGGTGCCCCGGGGGGAGCGGGGGCGCCCGCGCAGACGCCCGGccag > 1:3685483/1‑148 (MQ=255) tCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCa < 1:1409134/111‑1 (MQ=255) tCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCa > 2:1409134/1‑111 (MQ=255) aGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCCCGCCCCCAGCCGGCCCTACCGCAGAAGAGTTGGGCTGCACCAGGGGGAGCGGGCCCGCCCGCCGCGACGCCGGGCCAGcc > 1:1021623/1‑149 (MQ=255) aGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCTCCCACAGGCGGACCTACCCCGGAAAATTTTCGCTGCACCAGTGGGAGCGGGCGCGCCCCCCAACACGCCGGGCCAGCa > 2:443598/1‑150 (MQ=255) gTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTgg > 1:69082/1‑114 (MQ=255) ttATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCTCCCACACGCGGACAAACCGCTGAAGAATTGCGCTGCACCGGTGGGGGCGGGCCCGCCCCCCAACAGGCCGGGCCTGCAAAg > 2:2312740/1‑150 (MQ=255) tGACGGCGCTGCGGCCTGAACTTTCGGCTAATGATGGGTTTTGGTTCGGTCGCGGGCTGGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCa < 2:2107992/150‑1 (MQ=38) tGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTGGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCa < 2:130296/150‑1 (MQ=255) cgcTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCa < 2:4322633/150‑1 (MQ=255) gCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCgg < 2:4280929/150‑1 (MQ=255) cTGAACGTTCGGCTCAAGATGGGTGGTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCGGAAGATTTGCGCTGCACCTCTGGGAGCGGGCGCGCCCGCCAAGAGGCCGGGCCGGCAAAGGCAGGATCACCGCCgcgc > 2:4002851/1‑150 (MQ=255) tGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCCCAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGcc < 2:4259113/150‑1 (MQ=255) tGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGcc < 2:1959433/150‑1 (MQ=255) tGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCCCGCCCACACGCGGACATACAGCAGAAGTATTTCGCTGCACCCGTGGGCACGGGCCCGCCCCCGCCGACGCCCGCCCAGCCAAGGCAACATAACCGCCGGGcc > 2:2280731/1‑150 (MQ=255) tGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTGGCCCGCTCCCACAGGCGGACATACCGCTGAATATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGcc < 1:2783036/150‑1 (MQ=255) caCGTTCGGCTCAAGAGGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATCCCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGa < 2:1310954/149‑1 (MQ=255) accGTTCGGCTCAAGCTGGGTGTTGGTTTCTGCGCGGGCTTGCCCGCTCCCACAGGCGGACATCCCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGa < 2:1086620/148‑1 (MQ=255) aaggtgcGGCTAATGTTGGGTGTTGGTTTCTTCGGGGGCTGGCCCGCTCCCACTGGCGGAAAACCCGCTGAAGATTTGCGCTGCACCGGGGGGCGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGa < 1:2719754/144‑1 (MQ=255) aaCGTTCGGCTCAAGATGGGTGTTGGTTTCTACGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGa < 2:1874701/150‑1 (MQ=255) gTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACaa < 1:1474671/150‑1 (MQ=255) ttCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCGCTCCCACAGGCGGACAAAACCCGGAAGGTTTTCGCTGGACCTGTGGGTGCGGGCGCGCCCGCGCAGACGCCCGGCCGGCAAAGGCAGGATAACCGCCCGGCCGCCAAc > 2:154359/1‑150 (MQ=255) atcctgcctttgcaggcccggccTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATCTGCGCTGCACCTGTGGGAGc < 1:1853368‑M1/68‑1 (MQ=255) tCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCGGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCCAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACggcagc > 2:3636261/1‑150 (MQ=255) cAAGAGGGGTGTTGGTTTCTGCGCGGGCGTGCCCGCTCCCACCGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCg < 1:4395637/150‑1 (MQ=255) aaGATGGGTGTTGGTTTCTTCGCGGGCTTTCCCGCGCCCACAGGCGGGCATACCGCTGAAGATTTTCGCTGCACCTGTGGGGGCGGGCGCGCCCGCGAAGAGGCCGGGCCAGCAAAGGCAGGATAACCGCCGGGCCGACAACAGCTGCgg > 2:1663120/1‑150 (MQ=255) gttgtgGGTTTCTGCGGGGGCTTGCCGGCACCCACCGGCGGACATCCCGCTCAATATTTGGGCGGCCCGTGGGGGAGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAg < 1:586668/148‑1 (MQ=255) ggTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACAGACCGCTGAAGATTTGCGCTGCACCGGGGGGAGCGGGCGCGCCCGCGCAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACAGCAGCGGTGCCac > 2:4407321/1‑149 (MQ=255) ggTGTGGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAg < 2:821119/150‑1 (MQ=255) gtTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGACGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGaaa < 2:1588149/150‑1 (MQ=255) gtTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGaaa < 2:2788232/150‑1 (MQ=255) ggGGGGTTGCCCGCTCCCACCGGCGTACATACGGCTTAATTTTTGGGCTGCACCTGTGGGCGGGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa > 1:1587825‑M1/3‑150 (MQ=255) GCGGGCTTGCCCGCTCCCACCGGCGGACATCCCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGaa > 1:2821581‑M1/1‑150 (MQ=255) ttGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGTGAGCGGGCCCGCCCGCGAAGATGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGCTGACCGAAACGCATCATGGAAGTaaat > 1:4289425/1‑148 (MQ=255) ttGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAAtt > 2:143663/1‑150 (MQ=255) | CATGGCGCGGTCTTCGAGCCATTTGACGTATGACGGGTCGGGCTGGGTCATTTCGCGTCCTCTTTGCGTGTCGGCACCGGCTCAGGTTATGACGGCGCTGCGGCCTGAACGTTCGGCTCAAGATGGGTGTTGGTTTCTTCGCGGGCTTGCCCGCTCCCACAGGCGGACATACCGCTGAAGATTTGCGCTGCACCTGTGGGAGCGGGCGCGCCCGCGAAGAGGCCGGGCCTGCAAAGGCAGGATCAGCGCCGGGCCGACAACTGCTGCGGTGCCAGAAACGCATCATGGAAGTAATT > NC_002947/3320951‑3321246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |