Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,405,777 C→T 5.2% P77L (CCA→CTA)  PP_3014 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,405,7770CT 5.2% 556.8 / 11.9 171P77L (CCA→CTA) PP_3014hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (82/80);  new base T (4/5);  total (86/85)
Fisher's exact test for biased strand distribution p-value = 7.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 176 total aligned reads displayed.

GCAACCCCCGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGG  >  NC_002947/3405635‑3405925
                                                                                                                                              |                                                                                                                                                    
gcAACCCCCGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGcc                                                                                                                                               <  2:1878611/150‑1 (MQ=255)
gcAACCCCCGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGcc                                                                                                                                               >  2:59034/1‑150 (MQ=255)
    cccccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTga                                                                                                                                           <  1:2116037/150‑2 (MQ=255)
    cccccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTga                                                                                                                                           <  1:3802271/150‑2 (MQ=255)
     ccccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGc                                                                                                                                          >  2:2524806/1‑150 (MQ=255)
      cccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCTTGGCGCCGTgagc                                                                                                                                         <  1:1292724/150‑4 (MQ=255)
      cccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCa                                                                                                                                         >  2:4312060/1‑150 (MQ=255)
       ccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCaa                                                                                                                                        >  1:1640464/1‑150 (MQ=255)
        cGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAg                                                                                                                                       <  1:2763822/150‑1 (MQ=255)
           cAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGcga                                                                                                                                    <  2:2025198/150‑1 (MQ=255)
            aaaCCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGcgac                                                                                                                                   <  1:4287796/150‑1 (MQ=255)
            aaaCCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGcgac                                                                                                                                   <  1:4287857/150‑1 (MQ=255)
            aaaCCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGcgac                                                                                                                                   >  1:3234758/1‑150 (MQ=255)
              aCCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGcgacga                                                                                                                                 >  2:3070222/1‑150 (MQ=255)
              aCCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGcgacga                                                                                                                                 >  2:2624902/1‑150 (MQ=255)
               cccACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGAt                                                                                                                                >  2:712814/1‑150 (MQ=255)
               cccACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGAt                                                                                                                                <  1:4007603/150‑1 (MQ=255)
                ccACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGAtg                                                                                                                               >  1:3056290/1‑150 (MQ=255)
                 cACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGAtgt                                                                                                                              >  1:2309471/1‑150 (MQ=255)
                  aCTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGAtgtg                                                                                                                             <  1:1441605/150‑1 (MQ=255)
                     gccagccaACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCtt                                                                                                                          >  1:3725813/1‑150 (MQ=255)
                      ccagccaACTGACCTGGAAATCGCCGCAGCAGTGCGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCACGCGCCGTGGCAAGCGCCGATGTGCTTg                                                                                                                         >  2:4308705/1‑150 (MQ=255)
                      ccagccaACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTg                                                                                                                         >  2:2369992/1‑150 (MQ=255)
                      ccagccaACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTg                                                                                                                         >  1:245231/1‑150 (MQ=255)
                       cagccaACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGa                                                                                                                        >  2:1055996/1‑150 (MQ=255)
                        agccaACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCATGCCGAAATGGCAGGCGCTGGCGCCACAGGCAACGCAGAAGTCGATAGCCAACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGAt                                                                                                                       >  1:82551/1‑150 (MQ=255)
                          ccaACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGAtgt                                                                                                                     <  1:2625379/150‑1 (MQ=255)
                          ccaACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGAtgt                                                                                                                     >  2:3664454/1‑150 (MQ=255)
                          ccaACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGAtgt                                                                                                                     <  1:2625470/150‑1 (MQ=255)
                           caccTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACCGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGAAAGCGACGATGTGCTTGAtgtg                                                                                                                    <  1:2938518/147‑1 (MQ=255)
                           caACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAACTGGCAGGCGCTGGCGCCACCGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGCTGTGCTTGAtgtg                                                                                                                    <  2:3446613/150‑1 (MQ=255)
                           caACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGAtgtg                                                                                                                    <  2:3446852/150‑1 (MQ=255)
                           caACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGAtgtg                                                                                                                    <  2:2739584/150‑1 (MQ=255)
                           caACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCGGTGTCCTGCCGAAAGGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGAtgtg                                                                                                                    <  1:1653131/150‑1 (MQ=255)
                            aaCTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGTTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTgg                                                                                                                   <  1:1093387/150‑1 (MQ=255)
                             aCTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGt                                                                                                                  <  2:2477994/150‑1 (MQ=255)
                              cTGACCATTAAATCGCCGCAGAAGTACGCCTCCTTTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCATAAGTCGATAGCCCACGGATACCTGATCACGGCGCCAAGCGCCTTGGCAAGCGACGATGTGCTTGATGTGGtt                                                                                                                 <  1:3630594/150‑1 (MQ=255)
                                gACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGa                                                                                                               <  1:1210427/150‑1 (MQ=255)
                                gACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGa                                                                                                               <  2:4301927/150‑1 (MQ=255)
                                  ccAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACg                                                                                                             <  1:149294/150‑1 (MQ=255)
                                    aGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCCCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGca                                                                                                           >  1:2000331/1‑149 (MQ=255)
                                     ggAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTc                                                                                                          >  1:2909299/1‑150 (MQ=255)
                                     ggAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTc                                                                                                          <  2:2529721/150‑1 (MQ=255)
                                      gAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCa                                                                                                         >  2:1716260/1‑150 (MQ=255)
                                         aTCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACCGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGa                                                                                                      <  1:1666078/150‑1 (MQ=255)
                                          tCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAg                                                                                                     <  1:4481245/150‑1 (MQ=255)
                                          tCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAg                                                                                                     >  2:3000475/1‑150 (MQ=255)
                                           cgccgcAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAgg                                                                                                    <  2:1435663/150‑1 (MQ=255)
                                               gcagcaGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAg                                                                                                >  1:3829494/1‑150 (MQ=255)
                                                 agcagTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGcc                                                                                              >  1:4378638/1‑150 (MQ=255)
                                                  gcagTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCcg                                                                                             >  2:3418436/1‑150 (MQ=255)
                                                       aCGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGa                                                                                        <  1:1808149/150‑1 (MQ=255)
                                                        cgccgcCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGAc                                                                                       <  2:3889858/150‑1 (MQ=255)
                                                                 tgtCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACaa                                                                              <  1:652828/150‑1 (MQ=255)
                                                                 ggtCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACaa                                                                              <  2:1210194/149‑1 (MQ=255)
                                                                  gtCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAg                                                                             <  1:3530847/150‑1 (MQ=255)
                                                                  gtCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAg                                                                             <  1:222520/150‑1 (MQ=255)
                                                                     cTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGc                                                                          >  1:2077146/1‑150 (MQ=255)
                                                                      tGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCa                                                                         >  2:2770580/1‑150 (MQ=255)
                                                                      tGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCa                                                                         >  2:1739400/1‑150 (MQ=255)
                                                                          gAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCtt                                                                     >  2:2506735/1‑150 (MQ=255)
                                                                              tGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTtctg                                                                 <  1:967505/150‑1 (MQ=255)
                                                                              tGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTtctg                                                                 >  1:1080465/1‑150 (MQ=255)
                                                                                  aGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTtctgtctg                                                             >  1:3484047/1‑150 (MQ=255)
                                                                                  aGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTtctgtctg                                                             >  2:3737409/1‑150 (MQ=255)
                                                                                  aGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTtctgtctg                                                             <  1:117808/150‑1 (MQ=255)
                                                                                   ggCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTgg                                                            <  1:2741419/150‑1 (MQ=255)
                                                                                   ggCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTgg                                                            <  2:1080465/150‑1 (MQ=255)
                                                                                    gcgccagcgcCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGc                                                           >  1:211146/7‑150 (MQ=255)
                                                                                     cgcTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGCTGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGcc                                                          >  1:23963/1‑149 (MQ=255)
                                                                                       cTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGAc                                                        <  2:2138859/150‑1 (MQ=255)
                                                                                                  ggCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCa                                             <  2:903428/150‑1 (MQ=255)
                                                                                                  ggCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCa                                             <  1:27065/150‑1 (MQ=255)
                                                                                                   gCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAg                                            <  2:2231838/150‑1 (MQ=255)
                                                                                                   gCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAg                                            <  2:3175186/150‑1 (MQ=255)
                                                                                                       cGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTg                                        >  1:500922/1‑150 (MQ=255)
                                                                                                          aGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCa                                     >  2:2026421/1‑150 (MQ=255)
                                                                                                          aGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCa                                     <  2:1326588/150‑1 (MQ=255)
                                                                                                           gAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAg                                    <  1:2234776/150‑1 (MQ=255)
                                                                                                            aaGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAgg                                   <  1:4371806/150‑1 (MQ=255)
                                                                                                            aaGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAgg                                   <  2:3585423/150‑1 (MQ=255)
                                                                                                            aaGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAgg                                   <  2:1967927/150‑1 (MQ=255)
                                                                                                             aGTCGATAGCCCACGGCTCCCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCTACAAGTTACGCCAGGCTGTCAGGc                                  <  1:1800132/150‑1 (MQ=255)
                                                                                                             aGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGc                                  <  1:1759207/150‑1 (MQ=255)
                                                                                                               tCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCaa                                >  2:1241026/1‑150 (MQ=255)
                                                                                                               tCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCaa                                <  2:3431675/150‑1 (MQ=255)
                                                                                                                       ccACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGTGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGa                        <  1:1347688/150‑1 (MQ=255)
                                                                                                                       ccACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGa                        >  1:2851775/1‑150 (MQ=255)
                                                                                                                       ccACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGa                        >  1:2254463/1‑150 (MQ=255)
                                                                                                                        cACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCATTGCCTgaca                       <  1:2646358/150‑4 (MQ=255)
                                                                                                                        cACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGAt                       <  1:2150393/150‑1 (MQ=255)
                                                                                                                         aCGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGAtt                      >  2:3265730/1‑150 (MQ=255)
                                                                                                                           ggCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGa                    >  2:1303187/1‑150 (MQ=255)
                                                                                                                             cTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAAt                  <  2:2947054/150‑1 (MQ=255)
                                                                                                                                  ttgccACGGCGCTTGGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGGATCAGTg             >  2:3014219/5‑150 (MQ=255)
                                                                                                                                   gCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGa            >  1:4165459/1‑150 (MQ=255)
                                                                                                                                     tCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGAcc          >  2:1930947/1‑150 (MQ=255)
                                                                                                                                      cACGGCGCTTGGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGAccc         >  1:2727320/1‑150 (MQ=255)
                                                                                                                                             ccAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCggg  <  2:1121665/150‑1 (MQ=255)
                                                                                                                                              cAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCggg  >  2:1716108/1‑149 (MQ=255)
                                                                                                                                              |                                                                                                                                                    
GCAACCCCCGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGG  >  NC_002947/3405635‑3405925

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑