Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,405,779 A→G 5.1% S78G (AGC→GGC)  PP_3014 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,405,7790AG 5.1% 568.0 / 12.8 176S78G (AGC→GGC) PP_3014hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (82/83);  new base G (4/5);  total (88/88)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.26e-01

Only 100 of 181 total aligned reads displayed.

GCAACCCCCGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTG  >  NC_002947/3405635‑3405928
                                                                                                                                                |                                                                                                                                                     
gcAACCCCCGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTCCCGGCTCACGGCGCCAAGCGcc                                                                                                                                                  >  1:2481594/1‑150 (MQ=255)
gcAACCCCCGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGcc                                                                                                                                                  <  2:1878611/150‑1 (MQ=255)
gcAACCCCCGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGcc                                                                                                                                                  >  2:59034/1‑150 (MQ=255)
gcAACCCCCGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGcc                                                                                                                                                  <  2:1878340/150‑1 (MQ=255)
  aaCCCCCGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCgg                                                                                                                                                >  2:3182981/1‑149 (MQ=255)
    cccccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCTTGGCGCCGTga                                                                                                                                              <  1:217961/150‑2 (MQ=255)
    cccccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCTTGGCGCCGTga                                                                                                                                              <  1:321477/150‑2 (MQ=255)
     ccccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGc                                                                                                                                             >  2:2524671/1‑150 (MQ=255)
     ccccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCCCACGGCGCTTGGCGCCGTgag                                                                                                                                             <  1:3591111/150‑3 (MQ=255)
      cccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCTTGGCGCCGTgagc                                                                                                                                            <  1:1292724/150‑4 (MQ=255)
      cccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCa                                                                                                                                            >  2:4312060/1‑150 (MQ=255)
       ccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCaa                                                                                                                                           >  1:1640464/1‑150 (MQ=255)
        cGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAg                                                                                                                                          <  1:2763822/150‑1 (MQ=255)
            aaaCCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGcgac                                                                                                                                      <  1:4287857/150‑1 (MQ=255)
             aaCCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGcgacg                                                                                                                                     >  1:2231838/1‑150 (MQ=255)
              aCCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGcgacga                                                                                                                                    >  2:3070222/1‑150 (MQ=255)
               cccACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGAt                                                                                                                                   <  1:4007603/150‑1 (MQ=255)
               cccACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGAt                                                                                                                                   >  2:712814/1‑150 (MQ=255)
                ccACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGAtg                                                                                                                                  >  1:3056290/1‑150 (MQ=255)
                 cACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGAtgt                                                                                                                                 >  1:2309471/1‑150 (MQ=255)
                  aCTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGAtgtg                                                                                                                                <  1:1441605/150‑1 (MQ=255)
                     gccagccaACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCtt                                                                                                                             >  1:3725996/1‑150 (MQ=255)
                      ccagccaACTGACCTGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTg                                                                                                                            >  2:4308663/1‑150 (MQ=255)
                       cagccaACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGa                                                                                                                           >  2:1055954/1‑150 (MQ=255)
                        agccaACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCATGCCGAAATGGCAGGCGCTGGCGCCACAGGCAACGCAGAAGTCGATAGCCAACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGAt                                                                                                                          >  1:82551/1‑150 (MQ=255)
                          ccaACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGAtgt                                                                                                                        <  1:2625470/150‑1 (MQ=255)
                           caccTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACCGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGAAAGCGACGATGTGCTTGAtgtg                                                                                                                       <  1:2938518/147‑1 (MQ=255)
                           caACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAACTGGCAGGCGCTGGCGCCACCGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGCTGTGCTTGAtgtg                                                                                                                       <  2:3446613/150‑1 (MQ=255)
                           caACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGAtgtg                                                                                                                       <  2:3446852/150‑1 (MQ=255)
                            aaCTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGTTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTgg                                                                                                                      <  1:1093387/150‑1 (MQ=255)
                             aCTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGt                                                                                                                     <  2:2477994/150‑1 (MQ=255)
                               tGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGGGGCAAGCGACGATGTGCTTGATGTGGTTg                                                                                                                   >  1:4409357/1‑150 (MQ=255)
                                gACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGa                                                                                                                  <  1:1210427/150‑1 (MQ=255)
                                gACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGa                                                                                                                  <  2:4301927/150‑1 (MQ=255)
                                  ccAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACg                                                                                                                <  1:149294/150‑1 (MQ=255)
                                     ggAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTc                                                                                                             <  2:2529721/150‑1 (MQ=255)
                                      gAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCa                                                                                                            >  2:1716607/1‑150 (MQ=255)
                                          tCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAg                                                                                                        <  1:2866778/150‑1 (MQ=255)
                                          tCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAg                                                                                                        >  2:3000475/1‑150 (MQ=255)
                                           cgccgcAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAgg                                                                                                       <  2:1435663/150‑1 (MQ=255)
                                               gcagcaGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAg                                                                                                   >  1:3829494/1‑150 (MQ=255)
                                                 agcagTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGcc                                                                                                 >  1:4378638/1‑150 (MQ=255)
                                                  gcagTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCcg                                                                                                >  2:3418436/1‑150 (MQ=255)
                                                        cgccgcCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGAc                                                                                          <  2:3889858/150‑1 (MQ=255)
                                                            gccTTTGTCCTGCCTAATTGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCTATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTc                                                                                      <  1:1994145/150‑1 (MQ=255)
                                                              cTGGGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTa                                                                                    <  1:244357/150‑1 (MQ=255)
                                                               tgtgTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTAc                                                                                   <  1:2136289/150‑1 (MQ=255)
                                                                 tgtCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACaa                                                                                 <  1:652828/150‑1 (MQ=255)
                                                                 ggtCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACaa                                                                                 <  2:1210194/149‑1 (MQ=255)
                                                                      tGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCa                                                                            >  2:2770580/1‑150 (MQ=255)
                                                                      tGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCa                                                                            >  2:2770525/1‑150 (MQ=255)
                                                                          gAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCtt                                                                        >  2:2506735/1‑150 (MQ=255)
                                                                              tGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTtctg                                                                    >  1:1080465/1‑150 (MQ=255)
                                                                              tGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTtctg                                                                    <  1:967505/150‑1 (MQ=255)
                                                                               ggCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTtctgt                                                                   <  1:3420324/150‑1 (MQ=255)
                                                                                  aGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTtctgtctg                                                                <  1:117808/150‑1 (MQ=255)
                                                                                  aGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTtctgtctg                                                                >  2:3737409/1‑150 (MQ=255)
                                                                                  aGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTtctgtctg                                                                >  1:3484047/1‑150 (MQ=255)
                                                                                   ggCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTgg                                                               <  1:2741419/150‑1 (MQ=255)
                                                                                   ggCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTgg                                                               <  2:1080465/150‑1 (MQ=255)
                                                                                    gcgccagcgcCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGc                                                              >  1:211146/7‑150 (MQ=255)
                                                                                       cTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGAc                                                           <  2:2138859/150‑1 (MQ=255)
                                                                                         ggCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACaa                                                         <  1:4124851/150‑1 (MQ=255)
                                                                                             ccACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCGTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTa                                                     >  1:2658664/1‑150 (MQ=255)
                                                                                                  ggCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCa                                                <  2:903428/150‑1 (MQ=255)
                                                                                                  ggCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCa                                                <  1:27097/150‑1 (MQ=255)
                                                                                                   gCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAg                                               >  1:425640/1‑150 (MQ=255)
                                                                                                       cGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTg                                           <  2:2020365/150‑1 (MQ=255)
                                                                                                       cGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTg                                           >  2:3610936/1‑150 (MQ=255)
                                                                                                          aGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCa                                        >  2:2026322/1‑150 (MQ=255)
                                                                                                          aGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCa                                        <  2:1326588/150‑1 (MQ=255)
                                                                                                            aaGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAgg                                      <  1:4371806/150‑1 (MQ=255)
                                                                                                             aGTCGATAGCCCACGGCTCCCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCTACAAGTTACGCCAGGCTGTCAGGc                                     <  1:1800132/150‑1 (MQ=255)
                                                                                                             aGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGc                                     <  1:1759207/150‑1 (MQ=255)
                                                                                                               tCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCaa                                   <  2:3431675/150‑1 (MQ=255)
                                                                                                               tCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCaa                                   >  2:1241026/1‑150 (MQ=255)
                                                                                                                 gATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATg                                 >  1:2095499/1‑150 (MQ=255)
                                                                                                                 gATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTGGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATg                                 <  1:481657/150‑1 (MQ=255)
                                                                                                                     gCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTg                             <  2:3461368/150‑1 (MQ=255)
                                                                                                                       ccACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGa                           >  1:2851775/1‑150 (MQ=255)
                                                                                                                       ccACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGa                           >  1:2254463/1‑150 (MQ=255)
                                                                                                                        cACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCATTGCCTgaca                          <  1:2646358/150‑4 (MQ=255)
                                                                                                                         aCGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGAtt                         >  2:3265730/1‑150 (MQ=255)
                                                                                                                           ggCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGa                       >  2:1303187/1‑150 (MQ=255)
                                                                                                                             cTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAAt                     <  2:2947054/150‑1 (MQ=255)
                                                                                                                               aCCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCa                   <  1:2063420/150‑1 (MQ=255)
                                                                                                                                ccGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAg                  <  1:2369992/150‑1 (MQ=255)
                                                                                                                                 cGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGt                 <  2:2077146/150‑1 (MQ=255)
                                                                                                                                  ttgccACGGCGCTTGGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGGATCAGTg                >  2:3014219/5‑150 (MQ=255)
                                                                                                                                   gCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGa               >  1:1663059/1‑150 (MQ=255)
                                                                                                                                     tCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGAcc             >  2:2352/1‑150 (MQ=255)
                                                                                                                                     tCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGAcc             >  2:1930947/1‑150 (MQ=255)
                                                                                                                                      cACGGCGCTTGGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGAccc            >  1:1388895/1‑150 (MQ=255)
                                                                                                                                           cgcCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCg       >  2:2667111/1‑150 (MQ=255)
                                                                                                                                            gcCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCgg      >  1:3706825/1‑150 (MQ=255)
                                                                                                                                             ccAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCggg     <  2:1121665/150‑1 (MQ=255)
                                                                                                                                              cAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCggg     >  2:1716108/1‑149 (MQ=255)
                                                                                                                                              cAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCggg     <  1:1716108/149‑1 (MQ=255)
                                                                                                                                               aaGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGtt   <  2:2571952/150‑1 (MQ=255)
                                                                                                                                                aGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTtg  <  2:2404552/150‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                     
GCAACCCCCGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGGGTTG  >  NC_002947/3405635‑3405928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑