| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,468,806 | T→G | 14.6% | intergenic (‑16/+108) | PP_3081 ← / ← PP_5560 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,468,806 | 0 | T | G | 14.6% | 393.2 / 9.5 | 178 | intergenic (‑16/+108) | PP_3081/PP_5560 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (31/111); new base G (22/6); total (61/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.76e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 180 total aligned reads displayed.
CGCGTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTCC > NC_002947/3468657‑3468955 | cgcgTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCt < 2:2423693/150‑1 (MQ=255) gcgTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTg < 1:2662903/150‑1 (MQ=255) tACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGGCGCCCgcgg > 1:2312250/1‑150 (MQ=255) aCCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCAgcggc > 2:2709859/1‑150 (MQ=255) tGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGGCGCCGGGgggggc > 1:3781442/1‑150 (MQ=255) gCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGcc < 2:2007959/150‑1 (MQ=255) gggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCGCAGGCGGCCaa < 1:3621179/150‑1 (MQ=255) ttGTCCCTGCTCATTTGCGGGGTCCGCTTTTAACCGGAACGGCATGCCGGTTCATGGCGTACGTTTTGCTGGGCATTGAGGCCGCCATAATTTAAAGAAGAGGAACTTA‑CGTCATTGGCGCCTTGGCGGCCTGCGGCGGCCAACGCtgtg < 2:225044/150‑1 (MQ=255) tGTCCCAGCTCAGTTGGGGGGTCCGCTCTTCACCGGCACCGAATGCCGGGTCCTGGCCGACCTGTTGCTGGGCAATGACGCCGCAATCAGTTAAAGACGAGTAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGc < 1:2233603/150‑1 (MQ=255) cccAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCGGTGCAgg > 2:2974488/1‑150 (MQ=255) ccAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGGCGCCGGCGGCGGGCCACCCGGTGGAggg > 1:40467/1‑150 (MQ=255) ccAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAggg > 2:4029858/1‑150 (MQ=255) aGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCCACGCTGTGCAGGgcc > 1:3002667/1‑149 (MQ=255) gCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGgcag < 2:2537084/150‑1 (MQ=255) tGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCGCCGGCGGCCCACCCAGTTCCGGGCCGCAAaaca > 1:2801582/1‑150 (MQ=255) gCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagcag > 2:709000/1‑150 (MQ=255) gggggCCCGCTCTCCACCGGCACCGCATGCGGGGTCGTGGCCGACCTGTTGCTGGGAAATGACGCCGCCATCTGTTAAACACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagcagc < 1:569226/149‑1 (MQ=255) cGGGGTCCGCTCTTCACCGGCACCGCTTGCGGGGTCCTGGCCGACCTGTTGCTGGGAAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagcagc < 2:1218256/150‑1 (MQ=255) cGGGGTCCGCTCTTCACCGGCACCGCATGCGGGGTCCTGGCCGACCTGTTGCAGGGAAATGCCGCCGCAATCAGTTAAAGACGAGGAACTGACCGACA‑GCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagcagc < 1:4354248/150‑1 (MQ=255) cGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagcagc < 2:3170587/150‑1 (MQ=255) cGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagcagc < 2:1051262/150‑1 (MQ=255) cGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTGGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagcagc < 2:1218360/150‑1 (MQ=255) tCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCTGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACa < 2:808139/150‑1 (MQ=255) cGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGCGCAGGGCAGCAAAGCAGCGAACAGc > 2:2114421/1‑150 (MQ=255) cGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCGGCGGCGGCCAACGCAGTGCAGGGCAGCAAAGCAGCGAACAGc > 2:2773541/1‑150 (MQ=255) gCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCGGCGGCGGCCCACCCAGTGGAGGGCCGCAAAGCAGCGAACAccc > 1:639988/1‑150 (MQ=255) gCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCCCCGGCGGCGGCCCACGCGGTGCAGGGCCGCAAAGCAGCCAACAccc > 1:4349202/1‑150 (MQ=255) gCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGAATTGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGcc < 2:2388123/150‑1 (MQ=255) ttCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCGGCGGCGGCCCACCCGGTTCAGGGCAGCAAAGCACCGAACCGCCAggg > 2:4218166/1‑148 (MQ=255) cACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGGCGCCCGCCGCCGCCAAACCGGTGGAGGGCCGCAAAGCACCCAACAccccctggg > 1:1636569/1‑144 (MQ=255) cGGCACCGCATGGGGGGTCCTGGCCGCCGTGTTGCTGGGCATTGCCGCCGCCATCTGTGAAAGCCGAGGAACTGACCGACA‑TCGCGCCTGGGCCGCCTGGGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGa < 1:148168/150‑1 (MQ=255) ggCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCTGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAg < 2:518778/150‑1 (MQ=255) ggCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAg < 2:825882/150‑1 (MQ=255) ggCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAg < 2:4208440/150‑1 (MQ=255) gCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAgg > 2:377689/1‑150 (MQ=255) gCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCGGCGGCGGCCAAACCGGTGCAGGGCCGCAAAGCAGCGAACAGCCACTGTGTgggg > 1:2508199/1‑150 (MQ=255) accccGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCCCCGGCGGCGGCCAACGCTGTGCCGGGCCGCAAAGCAGCGAACAGCCCGTGGCTGAgg > 2:82042/4‑150 (MQ=255) ccccgattGCGGGGGCCGGGCCGACCTGTTGCTGGGCAATGACGCCGCAATCTTTTAACCCCGCGGAACTGACCGACA‑TCGCGCCTGGGCCGCCGGGGGCGCCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGt < 1:747372/143‑1 (MQ=255) ccGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGc < 2:450579/150‑1 (MQ=255) cATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATg < 2:2689481/150‑1 (MQ=255) tGCCGGGTCCTGCCCGACCTGTTGCTGGGAAATGACGCCGCAATCATTTAAATACGTGTAACTTACCGAAA‑TCGCGCCTTGGCCGCGTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGt < 1:1174961/150‑1 (MQ=255) gCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTc < 1:2919681/150‑1 (MQ=255) cGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCaa > 2:2949171/1‑150 (MQ=255) gggTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAAt < 2:1819999/150‑1 (MQ=255) gggTCCGGGCCGACGTGTTGCTGGGCATTGACGCCGCCATCTGTGAAAGACGAGGCACTGACCGACA‑TCGCGCCTGGGCCGCCTGGGGCGCCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAAt < 1:447907/150‑1 (MQ=255) gggTCCGGGCCGACCTGTTGCAGGGAAATGACGCCGCCATCATTTAAAGACGAGTAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAAt < 1:447927/150‑1 (MQ=255) ggTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATc < 2:1132448/150‑1 (MQ=255) ccTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTTAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCtt < 1:2532499/150‑1 (MQ=255) tGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCGGCCGCGGGCCACCCTGTGCAGGGCAGCAAAGCAGCCAACAGCCAGTGTCGGAGGTGCATGGTCAAtacatgt > 1:2555511/1‑144 (MQ=255) tGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCAGCGGCGGCCAACCCGGTGCAGGGCAGCAAAGCAGCGAACACCCCGTGTCTGAGGTGCATGGTCaaaacatgg > 2:765959/1‑143 (MQ=255) gCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGTAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCa < 1:4396389/150‑1 (MQ=255) gCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCCACGCTGTGCAGGGCACCAAAGCCGCGCACAGCCACTGTCTGAGGTGCCTGGTCAATACTTGGcc > 2:3567308/1‑149 (MQ=255) gCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCa < 2:2414471/150‑1 (MQ=255) gCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCCGCGGCGGCCAACCCGGTTCCGGGGCGCAAACCAGCGAACAGCCCGTGTCTGAGGTGCATGGTCAATCCGTTGCa > 1:1076654/1‑150 (MQ=255) ccGACCTGTTGCTGGGCATTGACGCCGCCATCAGTCAAAGACGAGGATCTGACCGACT‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAg < 1:964476/150‑1 (MQ=255) cGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGCGGAACTGACCGACA‑TCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAgg < 2:1635298/150‑1 (MQ=255) gCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACgg < 2:4087970/150‑1 (MQ=255) cAGGTCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGc < 1:4024410/150‑1 (MQ=255) aGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCt < 2:2095990/150‑1 (MQ=255) ggCAATGACGCCGCCATCAGTGAAAGACGAGGACCTGACCGACA‑TCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCa < 2:3219555/150‑1 (MQ=255) ggCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCa < 1:4491935/150‑1 (MQ=255) aattGACGCCGCCATATGTGAAAGACGTGGAACTGACCGACA‑TCGCGCCTGGGCCGCCTGCGGCGCCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGt < 1:2036223/147‑1 (MQ=255) aTGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCt < 2:1663835/150‑1 (MQ=255) tGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTa < 2:936081/150‑1 (MQ=255) aCGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGc < 2:1764319/150‑1 (MQ=255) cgccATCCGTTAAAGACGAGTAACTGACCGACA‑TCGCGCCTTGGCCGCCGGGGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAg < 1:839782/150‑1 (MQ=255) cgccATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTGGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCAAGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAg < 1:245048/150‑1 (MQ=255) ccaccaGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGt < 1:1006067/150‑1 (MQ=255) ccaccaGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGt < 1:3525016/150‑1 (MQ=255) aTCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCGGCGGCGGCCAACCCGGTGCAGGGCAGCAAATCAGCGCACAGCCCGTGTCGGAGGTGCATGGTCAAAACTTGGCAGGGCGTCACCGCGCAGTATAGCCCACGTCt > 2:859195/1‑150 (MQ=255) gAAAGACGCGGAACTGACCGACT‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCa < 1:3433441/150‑1 (MQ=255) gAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCa < 2:262950/150‑1 (MQ=255) gAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCa < 2:3879597/150‑1 (MQ=255) aaaGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCCGGGCAGCAAAGCAGCGAACAGCCAGTGTCGGAGGTGCATGGTCCATCCTTGGCAGGGCGTCACGGCGCAGTCTAGCCCAGGTCTGCTTCAg > 2:2536150/1‑150 (MQ=255) aaaGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCGGCGGCGGCCCACGCGGTGCAGGGCCGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATACGTTGCAGGGCGTCACGGCTCAGTCTATCCCAGGTCTGCGTCAg > 2:1394636/1‑150 (MQ=255) gACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCgg < 2:2056662/150‑1 (MQ=255) cgcggAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCt < 2:2146985/147‑1 (MQ=255) cGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCt < 2:2562901/150‑1 (MQ=255) gAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCACTGTCTGAGGTGCCTGGTCAAAACTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTg > 2:713372/1‑150 (MQ=255) cggAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGt < 2:4352589/149‑1 (MQ=255) aGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGt < 2:960711/150‑1 (MQ=255) aGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGt < 2:2769495/150‑1 (MQ=255) ggAACTGACCGACA‑TCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTc < 1:4304763/150‑1 (MQ=255) gAACTGACCGACA‑TCGCGCCTTGGCCGCCTGGGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTcc < 1:3949627/150‑1 (MQ=255) gAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTcc < 1:1853128/150‑1 (MQ=255) gAACTGACCGACA‑TCGCGCCTGGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTcc < 1:103985/150‑1 (MQ=255) cTGACCGACA‑TCGCGCCTTGGCCGCCTGCCGCGGGCAACGCTGGGCAGGGCCGCAAATCCGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTTGCAGGGCGTCACGGCGCAGTCTCGCCCAGGTCTGCTTAAGCGGCTGTCCTgg > 2:2580452/1‑150 (MQ=255) a‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCa < 2:3407969/150‑1 (MQ=255) tCGCGCCTTGGCCCCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAAAAGCCAGTGTCTGAGGTGCATGGTCAATCCATGGCCGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAg > 2:4063126/1‑150 (MQ=255) cgcCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGc < 1:3727545/150‑1 (MQ=255) cTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTc > 2:2221717/1‑150 (MQ=255) ttGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTcc > 2:1465862/1‑150 (MQ=255) ttGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGACTGTCCTGGTCCTCGGCAGTGCCTcc > 2:592479/1‑150 (MQ=255) ccgccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTg > 1:2136387/1‑150 (MQ=255) cgccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTgg < 1:709000/150‑1 (MQ=255) cgccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTgg > 1:4417000/1‑150 (MQ=255) cgccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTgg > 1:4416754/1‑150 (MQ=255) cgccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTgg < 2:3958658/150‑1 (MQ=255) ccTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCt > 1:2767141/1‑150 (MQ=255) tGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTcc < 2:2312250/150‑1 (MQ=255) | CGCGTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACA‑TCGCGCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGCCTCCGCTGGCTCC > NC_002947/3468657‑3468955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |