Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,616,687 A→C 5.8% T199P (ACC→CCC) ‡ pet → protein Pet18

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,616,6870AC 5.8% 845.3 / 28.4 241T199P (ACC→CCC) ‡petprotein Pet18
Reads supporting (aligned to +/- strand):  ref base A (103/123);  new base C (4/10);  total (107/134)
Fisher's exact test for biased strand distribution p-value = 2.73e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 243 total aligned reads displayed.

CGAAACCGATGCCGGACAACTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATGGGCGCAGGCACGC  >  NC_002947/3616538‑3616836
                                                                                                                                                     |                                                                                                                                                     
 gAAACCGATGCCGGACAACTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCAc                                                                                                                                                      >  1:2821448/1‑150 (MQ=255)
 gAAACCGATGCCGGACAACTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCAc                                                                                                                                                      >  1:2096747/1‑150 (MQ=255)
     ccGATGCCGGACAACTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTg                                                                                                                                                  <  1:4403031/150‑1 (MQ=255)
          gCCGGACAACTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCt                                                                                                                                             <  1:4464442/150‑1 (MQ=255)
          gCCGGACAACTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCt                                                                                                                                             <  1:1296125/150‑1 (MQ=255)
            cGGACAACTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCCACGGTGCGCTgg                                                                                                                                           <  2:647352/150‑1 (MQ=255)
             ggACAACTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCCACGGTGCGCTggt                                                                                                                                          <  2:4274743/150‑2 (MQ=255)
             ggACAACTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGa                                                                                                                                          <  2:4045102/150‑1 (MQ=255)
             ggACAACTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGa                                                                                                                                          >  2:2487321/1‑150 (MQ=255)
             ggACAACTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGa                                                                                                                                          >  2:1482304/1‑150 (MQ=255)
             ggACAACTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGa                                                                                                                                          <  1:2312408/150‑1 (MQ=255)
               aCAACTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCCACGGTGCGCTggtag                                                                                                                                        <  1:1766868/150‑4 (MQ=255)
                cAACTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCt                                                                                                                                       <  2:211018/150‑1 (MQ=255)
                 aaCTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTg                                                                                                                                      <  1:481870/150‑1 (MQ=255)
                 aaCTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTg                                                                                                                                      <  1:813179/150‑1 (MQ=255)
                  aCTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTgg                                                                                                                                     <  2:4266927/150‑1 (MQ=255)
                    ttCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCt                                                                                                                                   >  2:1172185/1‑150 (MQ=255)
                    ttCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGAAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCt                                                                                                                                   >  2:4458516/1‑150 (MQ=255)
                      cGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCttt                                                                                                                                 <  1:1235504/150‑1 (MQ=255)
                         ccATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTttctt                                                                                                                              <  2:4333609/150‑1 (MQ=255)
                          cATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTttcttc                                                                                                                             <  2:2856250/150‑1 (MQ=255)
                             gCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGAt                                                                                                                          >  2:392383/1‑150 (MQ=255)
                             gCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGAt                                                                                                                          <  2:1533157/150‑1 (MQ=255)
                              ccGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATg                                                                                                                         >  1:303570/1‑150 (MQ=255)
                                gAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCt                                                                                                                       >  1:1322167/1‑150 (MQ=255)
                                 aGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCtg                                                                                                                      <  2:2076219/150‑1 (MQ=255)
                                 aGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCtg                                                                                                                      <  1:3973410/150‑1 (MQ=255)
                                  gTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCtgt                                                                                                                     <  2:3863179/150‑1 (MQ=255)
                                    ggATTCCCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCTCCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTgtgt                                                                                                                   <  2:4388593/150‑1 (MQ=255)
                                      aTTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACAGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACAGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTAc                                                                                                                 >  2:4310813/1‑150 (MQ=255)
                                        tACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTAccc                                                                                                               >  2:2812132/1‑150 (MQ=255)
                                        tACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTAccc                                                                                                               >  2:377799/1‑150 (MQ=255)
                                          cccTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCgg                                                                                                             >  1:2329785/1‑150 (MQ=255)
                                           ccTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGa                                                                                                            >  2:1375995/1‑150 (MQ=255)
                                           ccTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGa                                                                                                            >  1:2134645/1‑150 (MQ=255)
                                           ccTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGa                                                                                                            >  2:4377075/1‑150 (MQ=255)
                                             tGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAgg                                                                                                          <  2:3637753/150‑1 (MQ=255)
                                             tGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAgg                                                                                                          <  1:1860817/150‑1 (MQ=255)
                                                   aCAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAAt                                                                                                    <  1:2014657/150‑1 (MQ=255)
                                                   aCAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAAt                                                                                                    >  1:2246177/1‑150 (MQ=255)
                                                     aaCCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGa                                                                                                  >  1:4395262/1‑150 (MQ=255)
                                                       cccGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGc                                                                                                <  1:3564232/150‑1 (MQ=255)
                                                        ccGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCa                                                                                               >  1:1989597/1‑150 (MQ=255)
                                                         cGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCAt                                                                                              <  1:3505930/150‑1 (MQ=255)
                                                           gCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATgg                                                                                            <  1:3774717/150‑1 (MQ=255)
                                                           gCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATgg                                                                                            <  1:4489107/150‑1 (MQ=255)
                                                             aTTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGat                                                                                          <  2:1961675/150‑1 (MQ=255)
                                                               tCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGatat                                                                                        >  1:1081806/1‑150 (MQ=255)
                                                                     cATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGa                                                                                  <  2:1312732/150‑1 (MQ=255)
                                                                           tcgCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCt                                                                            >  2:2156512/1‑150 (MQ=255)
                                                                            cgCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTc                                                                           <  2:1848935/150‑1 (MQ=255)
                                                                               tttCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAg                                                                        >  2:347020/1‑150 (MQ=255)
                                                                                 tCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGc                                                                      <  1:3994639/150‑1 (MQ=255)
                                                                                  ccTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGcc                                                                     >  1:3686014/1‑150 (MQ=255)
                                                                                    tGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGTAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGc                                                                   >  2:478420/1‑150 (MQ=255)
                                                                                     gCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCt                                                                  <  2:4146242/150‑1 (MQ=255)
                                                                                     gCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCt                                                                  <  1:1713509/150‑1 (MQ=255)
                                                                                       aGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTgc                                                                <  2:3947186/150‑1 (MQ=255)
                                                                                          ccGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTgccac                                                             <  2:1898834/150‑1 (MQ=255)
                                                                                                 ggACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACaa                                                      >  1:2985408/1‑150 (MQ=255)
                                                                                                 ggACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACaa                                                      <  1:759265/150‑1 (MQ=255)
                                                                                                  gACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAAt                                                     >  1:3568307/1‑150 (MQ=255)
                                                                                                   aCCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATg                                                    >  1:2572607/1‑150 (MQ=255)
                                                                                                   aCCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATg                                                    <  2:1870857/150‑1 (MQ=255)
                                                                                                    ccGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATgg                                                   >  2:1039544/1‑150 (MQ=255)
                                                                                                        gTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCCGCGCACCGTGGCGCTGGAGCTGGCTGTCTTCGATGGTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACACTGGAAcc                                               >  2:4221862/1‑150 (MQ=255)
                                                                                                        gTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAAcc                                               <  1:2428367/150‑1 (MQ=255)
                                                                                                          cGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGc                                             >  2:830277/1‑150 (MQ=255)
                                                                                                                gCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTa                                       <  2:3201675/150‑1 (MQ=255)
                                                                                                                    gaggCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGAcc                                   >  1:366381/1‑150 (MQ=255)
                                                                                                                      ggCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCAt                                 <  2:2124936/150‑1 (MQ=255)
                                                                                                                      ggCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCAt                                 <  2:2718059/150‑1 (MQ=255)
                                                                                                                           cTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACtt                            <  2:3822450/150‑1 (MQ=255)
                                                                                                                               ggCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTg                        <  1:1057201/150‑1 (MQ=255)
                                                                                                                               ggCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTg                        >  1:2477443/1‑150 (MQ=255)
                                                                                                                                gCAAGGGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCACATGAGCATGGAGATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGACCCGCTCCGTAGACCATGACTTCGTGc                       >  2:4184188/1‑150 (MQ=255)
                                                                                                                                 cAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCg                      <  1:3356173/150‑1 (MQ=255)
                                                                                                                                 cAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCg                      <  1:4166115/150‑1 (MQ=255)
                                                                                                                                  aaGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCgg                     >  2:3428676/1‑150 (MQ=255)
                                                                                                                                  aaGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCgg                     >  1:1483035/1‑150 (MQ=255)
                                                                                                                                         ttCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCCCAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATgg              >  2:2305777/1‑150 (MQ=255)
                                                                                                                                         ttCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATgg              >  2:3185712/1‑150 (MQ=255)
                                                                                                                                         ttCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATgg              >  1:2718047/1‑150 (MQ=255)
                                                                                                                                         ttCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATgg              <  1:633490/150‑1 (MQ=255)
                                                                                                                                         ttCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATgg              <  2:138355/150‑1 (MQ=255)
                                                                                                                                          tCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATggg             >  2:117463/1‑150 (MQ=255)
                                                                                                                                          agctccAGCGCCACGGTGCGCTGGTGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATggg             >  1:3324147/5‑150 (MQ=255)
                                                                                                                                           gctccAGCGCCACGGTGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATGGgc            >  1:2630630/4‑150 (MQ=255)
                                                                                                                                           cTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATGGgc            <  1:2546369/150‑1 (MQ=255)
                                                                                                                                            tACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGAc                                    <  1:3920522/125‑1 (MQ=255)
                                                                                                                                            tACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATGGgcg           >  1:4417808/1‑150 (MQ=255)
                                                                                                                                            tACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATGGgcg           >  2:1418641/1‑150 (MQ=255)
                                                                                                                                             tccAGCGCCACGGTGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACAGCTACGTAGACCATGACTTCGTGCGGCAGATGGgcgc          >  1:3940525/2‑150 (MQ=255)
                                                                                                                                              ccAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATGGGCGCa         >  1:468419/1‑150 (MQ=255)
                                                                                                                                               cAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATGGGCGCAg        <  1:913761/150‑1 (MQ=255)
                                                                                                                                                aGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATGGGCGCAgg       <  2:1275624/150‑1 (MQ=255)
                                                                                                                                                aGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATGGGCGCAgg       <  1:1351836/150‑1 (MQ=255)
                                                                                                                                                  cgcACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATGGGCGCAGGCa     <  1:4311906/150‑1 (MQ=255)
                                                                                                                                                    cACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATGGGCGCAGGCACg   >  2:362758/1‑150 (MQ=255)
                                                                                                                                                    cACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATGGGCGCAGGCACg   <  2:1811976/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CGAAACCGATGCCGGACAACTTCGTCCATGCCGAGTGGATTACCCTGCATGACAACCCGGCATTCCAGGCATTCGTCGCTTTCCTGCAGGCCGAACTGGACCGCGTCGGCCCGCAGGAGGCCGCTTTGGCAAGTGACTTCTACCAGCGCACCGTGGCGCTGGAGCTGGCTTTCTTCGATGCTGTGTACCCGGAGGGCAAATGAGCATGGATATCTTCGAGCGCCTCAAGGCCGCTGCCACGCCACAATGGAACCGCTACGTAGACCATGACTTCGTGCGGCAGATGGGCGCAGGCACGC  >  NC_002947/3616538‑3616836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑