BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,699,411	T→C	6.1%	S15G (AGC→GGC) ‡	PP_5595 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,699,411	0	T	C	6.1%	634.4 / 19.5	195	S15G (AGC→GGC) ‡	PP_5595	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (87/96); new base C (7/5); total (94/101)
Fisher's exact test for biased strand distribution p-value = 5.58e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01

Only 100 of 195 total aligned reads displayed.

TGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCAGGTAGGTCACCACTGCCAA  >  NC_002947/3699264‑3699559

tGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTgg                                                                                                                                                     <  1:2139901/150‑1 (MQ=255)

   ccTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCa                                                                                                                                                  >  1:2714604/1‑150 (MQ=255)

    cTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAg                                                                                                                                                 <  1:2091705/150‑1 (MQ=255)

     ttGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAgg                                                                                                                                                >  1:3116904/1‑150 (MQ=255)

     ttGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAgg                                                                                                                                                >  2:4273472/1‑150 (MQ=255)

        cTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAG‑CCTGGCCAGCGGCCAggtctg                                                                                                                                            <  2:606723/150‑5 (MQ=255)

         tttCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAG‑CCTGGCCAGCGGCCAggtctgg                                                                                                                                           <  1:4429612/150‑6 (MQ=255)

          ttCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGc                                                                                                                                          >  1:1060445/1‑150 (MQ=255)

          ttCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCAGCGGCCAggtctgg                                                                                                                                           <  2:4505299/150‑6 (MQ=255)

               tgctgcATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACca                                                                                                                                     <  1:3340486/150‑1 (MQ=255)

                 ctgcATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACcatc                                                                                                                                   >  2:129611/1‑150 (MQ=255)

                  tgcATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACcatca                                                                                                                                  <  2:2207476/150‑1 (MQ=255)

                   gcATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCACTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACcatcat                                                                                                                                 >  2:2820261/1‑150 (MQ=255)

                     aTGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACcatcatca                                                                                                                               >  2:1880110/1‑150 (MQ=255)

                      tGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACcatcatcat                                                                                                                              <  1:1712336/150‑1 (MQ=255)

                         ccAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCaa                                                                                                                           <  2:823480/150‑1 (MQ=255)

                          cAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAg                                                                                                                          >  1:62912/1‑150 (MQ=255)

                            gTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGc                                                                                                                        >  2:3483858/1‑150 (MQ=255)

                             ttGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCa                                                                                                                       >  2:2139200/1‑150 (MQ=255)

                               gATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAgg                                                                                                                     <  1:2809033/150‑1 (MQ=255)

                                 tCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGaa                                                                                                                   <  2:4004451/150‑1 (MQ=255)

                                 tCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGACCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGaa                                                                                                                   >  1:2980902/1‑150 (MQ=255)

                                 tCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGACCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGaa                                                                                                                   >  1:1310213/1‑150 (MQ=255)

                                        ggcggGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCAt                                                                                                            >  1:4170017/1‑150 (MQ=255)

                                        ggcggGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCAt                                                                                                            >  1:4169978/1‑150 (MQ=255)

                                           gggTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCAtttt                                                                                                         >  1:2990687/1‑150 (MQ=255)

                                           gggTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCAtttt                                                                                                         >  2:1665351/1‑150 (MQ=255)

                                            ggTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTc                                                                                                        <  2:2323949/150‑1 (MQ=255)

                                            ggTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTc                                                                                                        <  2:2643441/150‑1 (MQ=255)

                                             gTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTcc                                                                                                       >  1:4378975/1‑150 (MQ=255)

                                              tATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCa                                                                                                      <  1:1218949/150‑1 (MQ=255)

                                               aTGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCAc                                                                                                     <  2:4307306/150‑1 (MQ=255)

                                                tGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCAcc                                                                                                    >  1:3957649/1‑150 (MQ=255)

                                                    gctgtagctgtaACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCa                                                                                                >  2:3218640/1‑150 (MQ=255)

                                                    gctgtagctgtaACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCa                                                                                                >  1:1282174/1‑150 (MQ=255)

                                                     ctgtagctgtaACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAg                                                                                               <  2:866085/150‑1 (MQ=255)

                                                      tgtagctgtaACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAgg                                                                                              >  2:927788/1‑150 (MQ=255)

                                                       gtagctgtaACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAggg                                                                                             >  2:3593945/1‑150 (MQ=255)

                                                             gtaACAGGTGTGCCGCTCCACCAGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGACCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAg                                                                                       >  2:4179179/1‑150 (MQ=255)

                                                              taACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAgg                                                                                      <  1:1169633/150‑1 (MQ=255)

                                                               aaCAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGc                                                                                     <  1:3329719/150‑1 (MQ=255)

                                                                   ggTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTc                                                                                 <  2:1385852/150‑1 (MQ=255)

                                                                   ggTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTc                                                                                 <  1:4088567/150‑1 (MQ=255)

                                                                       tgCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCa                                                                             >  1:2909829/1‑150 (MQ=255)

                                                                         ccGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAgg                                                                           >  1:4284299/1‑150 (MQ=255)

                                                                            cTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCt                                                                        <  1:3316531/150‑1 (MQ=255)

                                                                              ccACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGa                                                                      <  2:3685742/150‑1 (MQ=255)

                                                                              ccACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGa                                                                      <  2:1409624/150‑1 (MQ=255)

                                                                              ccACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGa                                                                      <  2:2113236/150‑1 (MQ=255)

                                                                                 ccGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCa                                                                   <  1:3369702/150‑1 (MQ=255)

                                                                                  cGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAg                                                                  <  2:1302673/150‑1 (MQ=255)

                                                                                   ggCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAgg                                                                 <  2:372420/150‑1 (MQ=255)

                                                                                      gTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCtt                                                              <  1:1995406/150‑1 (MQ=255)

                                                                                      gTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCAGCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCtt                                                              >  2:1810219/1‑150 (MQ=255)

                                                                                         aCGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTc                                                           <  1:2239564/150‑1 (MQ=255)

                                                                                         aCGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTc                                                           >  2:3490640/1‑150 (MQ=255)

                                                                                           ggCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCCGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTcgc                                                         >  2:4419302/1‑150 (MQ=255)

                                                                                           ggCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACcatcat                                                                                                                                 >  1:4294712/1‑78 (MQ=255)

                                                                                           ggCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACcatcat                                                                                                                                 <  2:4294712/78‑1 (MQ=255)

                                                                                               tCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCg                                                     >  1:1873963/1‑150 (MQ=255)

                                                                                                  cTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGgcg                                                  >  2:1209089/1‑150 (MQ=255)

                                                                                                      aggagCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATg                                              <  1:1002787/150‑1 (MQ=255)

                                                                                                       ggagCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATgg                                             <  1:947333/150‑1 (MQ=255)

                                                                                                        gagCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGc                                            >  2:1512975/1‑150 (MQ=255)

                                                                                                           cGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACATGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCttt                                         <  2:4080750/150‑1 (MQ=255)

                                                                                                           cGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCttt                                         <  2:3796598/150‑1 (MQ=255)

                                                                                                           cGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCttt                                         <  2:2520561/150‑1 (MQ=255)

                                                                                                            gAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTg                                        <  2:1060445/150‑1 (MQ=255)

                                                                                                            gAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTg                                        <  2:1560800/150‑1 (MQ=255)

                                                                                                                tgtcacaTTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGgcgc                                    <  1:3780491/147‑1 (MQ=255)

                                                                                                                cAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGgcgc                                    <  1:635448/150‑1 (MQ=255)

                                                                                                                cAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGgcgc                                    >  2:3808431/1‑150 (MQ=255)

                                                                                                                 aGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCAAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGcgcg                                   >  1:47033/1‑150 (MQ=255)

                                                                                                                      aTTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGttttt                              >  2:1250872/1‑150 (MQ=255)

                                                                                                                       ttGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTc                             >  1:3911185/1‑150 (MQ=255)

                                                                                                                         gCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCa                           <  1:485095/150‑1 (MQ=255)

                                                                                                                         gCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCa                           <  2:353862/150‑1 (MQ=255)

                                                                                                                         gCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCa                           >  2:3605866/1‑150 (MQ=255)

                                                                                                                           aaGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAgg                         >  1:2632430/1‑150 (MQ=255)

                                                                                                                           aaGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAgg                         >  2:2008360/1‑150 (MQ=255)

                                                                                                                           aaGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAgg                         >  2:2171066/1‑150 (MQ=255)

                                                                                                                           aaGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTGTGGCGCGTTTTTCCAgg                         >  1:680860/1‑150 (MQ=255)

                                                                                                                              cTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGAATTTCCAGGATc                      >  2:3001423/1‑150 (MQ=255)

                                                                                                                                    cccAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCaggtag                <  2:1844915/150‑1 (MQ=255)

                                                                                                                                    cccAGACCTGGCCGCTGGCCAGG‑CGGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCCGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCaggtag                <  2:4117154/150‑1 (MQ=255)

                                                                                                                                      ccagccTGGCCAGCGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCaggtaggt              >  1:1199129/5‑150 (MQ=255)

                                                                                                                                      cAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCaggtaggt              <  2:224470/150‑1 (MQ=255)

                                                                                                                                       cagccTGGCCAGCGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCAGGTAGGTc             >  1:3648898/4‑150 (MQ=255)

                                                                                                                                       cagccTGGCCAGCGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCAGGTAGGTc             >  1:1569178/4‑150 (MQ=255)

                                                                                                                                       cagccTGGCCAGCGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCAGGTAGGTc             >  1:1371552/4‑150 (MQ=255)

                                                                                                                                        agccTGGCCAGCGGCCAGGTCTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCAGGTAGGTc             >  2:3922065/3‑150 (MQ=255)

                                                                                                                                         gccTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCAGGTAGGTcac           >  2:3672028/2‑150 (MQ=255)

                                                                                                                                         aCCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCAGGTAGGTcac           <  2:1282174/150‑1 (MQ=255)

                                                                                                                                           cTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCAGGTAGGTcacca         >  2:3972713/1‑150 (MQ=255)

                                                                                                                                            tGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCAGGTAGGTcaccac        >  2:3927860/1‑150 (MQ=255)

                                                                                                                                            tGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCAGGTAGGTcaccac        >  2:647678/1‑150 (MQ=255)

                                                                                                                                            gggCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCAGGTAGGTcaccac        <  2:2872244/149‑1 (MQ=255)

                                                                                                                                               ccGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCAGGTAGGTCACCACTGc     <  1:2323368/150‑1 (MQ=255)

                                                                                                                                               ccGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCAGGTAGGTCACCACTGc     >  2:1125451/1‑150 (MQ=255)

                                                                                                                                                  cTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCAGGTAGGTCACCACTGCCaa  <  2:2705957/150‑1 (MQ=255)

TGTCCTTGCTTTCGTTGCTGCATGACCAGTTGATCGCTTCGGCGGGTATGTTGCTGTAGCTGTAACAGGTGTGCCGCTCCACCGGCGTCACGGCGTCGCTGGAGGAGCGAGTCAGCACATTGCAAGCTTCGGCCCAGACCTGGCCGCTGGCCAGG‑CTGGCAACCATCATCATCAAGGCAGGAACACGCATTTTCCACCTCCAGGGCACAAGGCCCTCGTCAGGTCTGAGCAGGCTTGTCGCGCCGGCGCATGGCTTTGGCGCGTTTTTCCAGGATCAGGTAGGTCACCACTGCCAA  >  NC_002947/3699264‑3699559

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`