BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,764,912	A→T	5.3%	I64F (ATC→TTC)	PP_3326 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,764,912	0	A	T	5.3%	716.8 / 18.8	209	I64F (ATC→TTC)	PP_3326	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (79/119); new base T (7/4); total (86/123)
Fisher's exact test for biased strand distribution p-value = 2.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01

Only 100 of 210 total aligned reads displayed.

GGTCAGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAGGAT  >  NC_002947/3764764‑3765061

 gTCAGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATc                                                                                                                                                      <  1:3878943/150‑1 (MQ=255)

 gTCAGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATc                                                                                                                                                      <  1:2855374/150‑1 (MQ=255)

 gTCAGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATc                                                                                                                                                      >  1:1962106/1‑150 (MQ=255)

 gTCAGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATc                                                                                                                                                      <  1:4365755/150‑1 (MQ=255)

  tCAGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATcc                                                                                                                                                     >  1:1236015/1‑150 (MQ=255)

    aGCGTCAACGCAGGCTCCAACGGCCTGTGGAACGAGGAGCGACTTTGCATTATCGAGGCCGTGTACGGCGTCTGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGAGTTCGACGTGACCTGGTACTTGATCCCg                                                                                                                                                   <  2:1464618/150‑1 (MQ=255)

    aGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCg                                                                                                                                                   <  2:2212449/150‑1 (MQ=255)

    aGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCg                                                                                                                                                   <  1:2545648/150‑1 (MQ=255)

     gCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCgg                                                                                                                                                  >  2:3706549/1‑150 (MQ=255)

      cGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGATCATGTTCCCGGt                                                                                                                                                 <  1:1248565/150‑1 (MQ=255)

      cGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGt                                                                                                                                                 <  1:3323957/150‑1 (MQ=255)

        tCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCa                                                                                                                                               >  1:66226/1‑150 (MQ=255)

         cAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCAc                                                                                                                                              >  1:917184/1‑150 (MQ=255)

         cAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCAc                                                                                                                                              >  1:3931570/1‑150 (MQ=255)

         cAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCAc                                                                                                                                              >  1:3186023/1‑150 (MQ=255)

         cAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCAc                                                                                                                                              >  1:2112241/1‑150 (MQ=255)

           aCGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAGGCGCGCCTGGGCGTTCGACGTGACCGGGACCATGATCCCGGTCACgg                                                                                                                                            >  2:635875/1‑150 (MQ=255)

           aCGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACgg                                                                                                                                            <  2:3502619/150‑1 (MQ=255)

               aGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGa                                                                                                                                        <  1:2134929/150‑1 (MQ=255)

               aGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGa                                                                                                                                        >  1:4377291/1‑150 (MQ=255)

                 gcgcCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAgc                                                                                                                                      <  1:3027849/150‑1 (MQ=255)

                 gcgcCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAgc                                                                                                                                      <  1:4326152/150‑1 (MQ=255)

                  cgcCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAgcg                                                                                                                                     <  1:2128240/150‑1 (MQ=255)

                     ccACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCt                                                                                                                                 >  1:3271987/1‑150 (MQ=255)

                     ccACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCt                                                                                                                                 <  2:1018241/150‑1 (MQ=255)

                        cGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTggn                                                                                                                              <  1:2908054/150‑2 (MQ=255)

                        cGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGc                                                                                                                              <  2:3069448/150‑1 (MQ=255)

                         ggCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCg                                                                                                                             <  2:1189822/150‑1 (MQ=255)

                           ccTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGa                                                                                                                           <  2:2535857/150‑1 (MQ=255)

                           ccTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGa                                                                                                                           >  2:2407708/1‑150 (MQ=255)

                           ccTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGa                                                                                                                           <  2:3925428/150‑1 (MQ=255)

                           ccTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGa                                                                                                                           <  2:1394741/150‑1 (MQ=255)

                           ccTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGa                                                                                                                           <  2:688776/150‑1 (MQ=255)

                             tgtgGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCgcgct                                                                                                                         <  2:3207197/150‑5 (MQ=255)

                             tgtgGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATc                                                                                                                         >  1:4457877/1‑150 (MQ=255)

                                 gACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGc                                                                                                                     >  2:1930817/1‑150 (MQ=255)

                                   ccGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCg                                                                                                                   >  1:860252/1‑150 (MQ=255)

                                          gCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCa                                                                                                            <  2:1853942/150‑1 (MQ=255)

                                          gCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCa                                                                                                            <  1:1555057/150‑1 (MQ=255)

                                           cGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCaa                                                                                                           <  1:412542/150‑1 (MQ=255)

                                            gACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAAc                                                                                                          <  1:2687957/150‑1 (MQ=255)

                                            gACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAAc                                                                                                          >  2:4147535/1‑150 (MQ=255)

                                                   cAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTAc                                                                                                   >  1:1066701/1‑150 (MQ=255)

                                                    aaTATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTAcc                                                                                                  >  2:277591/1‑150 (MQ=255)

                                                          gAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCt                                                                                            <  2:2077956/150‑1 (MQ=255)

                                                          gAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCt                                                                                            <  1:627911/150‑1 (MQ=255)

                                                           aGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTg                                                                                           <  2:860252/150‑1 (MQ=255)

                                                            ggCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGc                                                                                          <  2:3638787/150‑1 (MQ=255)

                                                            ggCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATACCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCCCCTGc                                                                                          >  1:538026/1‑150 (MQ=255)

                                                             gCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCg                                                                                         <  2:1265653/150‑1 (MQ=255)

                                                              ccGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCgg                                                                                        <  1:1085323/150‑1 (MQ=255)

                                                               cgtacaCGGCCTCGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGc                                                                                       >  1:4029674/6‑150 (MQ=255)

                                                                gtgtACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGGCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCGGCGGCa                                                                                      >  2:1277305/1‑150 (MQ=255)

                                                                    aCGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATACCCGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTg                                                                                  >  2:185883/1‑150 (MQ=255)

                                                                       gCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCg                                                                               <  2:2106571/150‑1 (MQ=255)

                                                                        ccACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGt                                                                              >  2:475250/1‑150 (MQ=255)

                                                                           cGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGtgct                                                                           <  2:3506644/150‑1 (MQ=255)

                                                                            ggCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGtgctg                                                                          >  1:1674721/1‑150 (MQ=255)

                                                                              cgcCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTgctgct                                                                        <  2:2957877/150‑1 (MQ=255)

                                                                               gcCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGctgctg                                                                       <  2:1699649/150‑1 (MQ=255)

                                                                                ccGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTgg                                                                      <  2:3005787/150‑1 (MQ=255)

                                                                                  gAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGAc                                                                    <  1:1831935/150‑1 (MQ=255)

                                                                                   aGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACa                                                                   >  2:3702310/1‑150 (MQ=255)

                                                                                      aTAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACg                                                                <  1:1281962/150‑1 (MQ=255)

                                                                                       tAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACgg                                                               <  2:3948445/150‑1 (MQ=255)

                                                                                        aaCGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACggg                                                              <  1:3510946/150‑1 (MQ=255)

                                                                                          cGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGcc                                                            <  2:1075131/150‑1 (MQ=255)

                                                                                          cGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCCTGCTGCAACCACTTACCCCGCCGGCGGCACTTGCCCTGCTGCTGGACAACGGGcc                                                            >  1:4171206/1‑150 (MQ=255)

                                                                                           gCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCt                                                           >  2:4427134/1‑150 (MQ=255)

                                                                                                           aGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCgg                                           >  2:3766448/1‑150 (MQ=255)

                                                                                                             aTCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGAc                                         <  2:3195407/150‑1 (MQ=255)

                                                                                                                aaGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAg                                      <  1:3453785/150‑1 (MQ=255)

                                                                                                                aaGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAAACACTTACCCCGCCTGCGGCACATGCCCTGCTGCTGGACAACGGGCCTTGGTAACAGCGCCCGGACAAg                                      >  1:2151905/1‑150 (MQ=255)

                                                                                                                    gcgcCTGGGCGTTCGACGTGACCGGTAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAAt                                  <  1:1430417/150‑1 (MQ=255)

                                                                                                                    gcgcCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAAt                                  <  2:2978063/150‑1 (MQ=255)

                                                                                                                    gcgcCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAAt                                  <  1:2192793/150‑1 (MQ=255)

                                                                                                                      gcCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATgg                                <  1:844206/150‑1 (MQ=255)

                                                                                                                      gcCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATgg                                <  2:4486048/150‑1 (MQ=255)

                                                                                                                      gcCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATgg                                <  2:1962106/150‑1 (MQ=255)

                                                                                                                       ccTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATggg                               <  2:2696243/150‑1 (MQ=255)

                                                                                                                         tGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTc                             >  2:568823/1‑150 (MQ=255)

                                                                                                                         tGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTc                             <  1:3628950/150‑1 (MQ=255)

                                                                                                                         tGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTc                             >  2:739487/1‑150 (MQ=255)

                                                                                                                              gTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCa                        >  1:2719617/1‑150 (MQ=255)

                                                                                                                                  gACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGAt                    <  1:1398023/150‑1 (MQ=255)

                                                                                                                                  accGTGACCGGGATCATGTTCCCGGTCAC‑GTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATc                   >  1:3737310/3‑150 (MQ=255)

                                                                                                                                     gTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGc                 <  2:3320814/150‑1 (MQ=255)

                                                                                                                                      tGACCGGGATCATGTTCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCa                >  2:3155916/1‑150 (MQ=255)

                                                                                                                                       gACCGGGATCATGTTCCCGGTCAC‑GTCGAACG‑CCCGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCAcc              >  1:3775097/1‑150 (MQ=255)

                                                                                                                                       gACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCAc               >  1:2745155/1‑150 (MQ=255)

                                                                                                                                       gACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCAc               >  1:2981882/1‑150 (MQ=255)

                                                                                                                                        aCCGGGATCATGTTCCCGGTCAC‑GTCGAACGCCCAGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCAcc              >  1:761669/1‑150 (MQ=38)

                                                                                                                                          cGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGtgctgc                                                                         >  2:2289875/1‑89 (MQ=255)

                                                                                                                                          cGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGtgctgc                                                                         <  1:2289875/89‑1 (MQ=255)

                                                                                                                                          cGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCa            <  1:504965/150‑1 (MQ=255)

                                                                                                                                              aaCATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTc        <  1:1172757/150‑1 (MQ=255)

                                                                                                                                              aaCATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTc        <  2:3271987/150‑1 (MQ=255)

                                                                                                                                                cATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCaa      <  2:4457877/150‑1 (MQ=255)

                                                                                                                                                 aTGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAg     >  1:1870193/1‑150 (MQ=255)

                                                                                                                                                 aTGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAg     >  1:805660/1‑150 (MQ=255)

GGTCAGCGTCAACGCAGGCGCCCACGGCCTGTGGACCGAGGAGCGACGTGGCAATATCGAGGCCGTGTACGGCCACGGCGCCGAGGATAACGCCTACAAGGCGGAAAAGATCAAGCGCGCCTGGGCGTTCGACGTGACCGGGAACATGATCCCGGTCACGGTCGAGCG‑CCTGGCGGATCATGCCGTGCTGCAACCACTTACCCCGCCTGCGGCACTTGCCGTGCTGCTGGACAACGGGCCTTGGTCACAGCGCCCGGACAAGCAATGGGTCAATCAGGATCGCACCCATGTCAAGGAT  >  NC_002947/3764764‑3765061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`