BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,770,240	C→A	5.2%	P97Q (CCG→CAG)	PP_5600 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,770,240	0	C	A	5.2%	619.1 / 14.0	181	P97Q (CCG→CAG)	PP_5600	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (90/80); new base A (7/3); total (97/84)
Fisher's exact test for biased strand distribution p-value = 3.45e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 185 total aligned reads displayed.

CACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGCGGGCGTGTGCTCACC  >  NC_002947/3770091‑3770389

cACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGcc                                                                                                                                                        >  2:1866959/1‑150 (MQ=255)

  cGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCGGCTCGCCGGCGAGCAgg                                                                                                                                                      <  1:2563705/150‑1 (MQ=255)

   ggCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCggg                                                                                                                                                     <  2:4141565/150‑1 (MQ=255)

   ggCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCggg                                                                                                                                                     >  1:2842297/1‑150 (MQ=255)

     ccGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑Ca                                                                                                                                                  >  1:3529133/1‑150 (MQ=255)

       gACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGc                                                                                                                                                <  2:1643641/150‑1 (MQ=255)

          agcagcGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGcccc                                                                                                                                             >  2:1768778/1‑150 (MQ=255)

           gcagcGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCt                                                                                                                                            >  2:3058292/1‑150 (MQ=255)

            cagcGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCtt                                                                                                                                           >  1:1664613/1‑150 (MQ=255)

            cagcGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCtt                                                                                                                                           <  2:815431/150‑1 (MQ=255)

               cGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTAcc                                                                                                                                        <  1:2777195/150‑1 (MQ=255)

                  cATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGGGGTGACTGCGTGATCGCCAGCGTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACccaa                                                                                                                                     <  1:893438/150‑1 (MQ=255)

                  cATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACTCTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACccaa                                                                                                                                     <  2:4323333/150‑1 (MQ=255)

                  cATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACccaa                                                                                                                                     >  2:3157568/1‑150 (MQ=255)

                   aTGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACccaac                                                                                                                                    <  2:3411138/150‑1 (MQ=255)

                       tCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCcaaccaac                                                                                                                                <  2:10991/150‑1 (MQ=255)

                        ccAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCaaacaacc                                                                                                                               >  1:265831/1‑150 (MQ=255)

                           aGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCCACCTcc                                                                                                                            <  2:1881723/150‑1 (MQ=255)

                                  cAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCCACCTCCGCCACGc                                                                                                                     >  1:957061/1‑150 (MQ=255)

                                  cAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGc                                                                                                                     >  1:235560/1‑150 (MQ=255)

                                  cAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGc                                                                                                                     >  1:3689146/1‑150 (MQ=255)

                                   aaGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGcc                                                                                                                    >  1:1033938/1‑150 (MQ=255)

                                   aaGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTGTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCGTACCCAACCAACCTCCGCCACGcc                                                                                                                    >  1:3638633/1‑150 (MQ=255)

                                    aGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTTATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTATTTTTCTGCCTGCTGACCCTGCTCGCGGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCt                                                                                                                   <  1:422752/150‑1 (MQ=255)

                                       cTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGcc                                                                                                                >  2:1302513/1‑150 (MQ=255)

                                       cTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGcc                                                                                                                >  2:1302853/1‑150 (MQ=255)

                                         tCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCa                                                                                                              >  1:2898977/1‑150 (MQ=255)

                                          cAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCaa                                                                                                             <  1:3863547/150‑1 (MQ=255)

                                           aGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCaac                                                                                                            >  1:179200/1‑149 (MQ=255)

                                             cGATCCGACCGTGTGTGCGGGGGGTGAGTGGGTGATCGCCAGCCTGTTCAGCGCCACAGTGGTGGCCGTCTTTTTGGGCCTGCTGACCCTGCTCGCGGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAagca                                                                                                          <  1:2023445/150‑1 (MQ=255)

                                                tCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCTTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAgcg                                                                                                       <  1:1168051/150‑1 (MQ=255)

                                                 ccGACCCTGTCTGCCGGCGGTGACTGCGTGATCACCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAgcgc                                                                                                      >  1:3056987/1‑150 (MQ=255)

                                                  cGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCt                                                                                                     <  1:4265986/150‑1 (MQ=255)

                                                  cGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCt                                                                                                     <  2:4485327/150‑1 (MQ=255)

                                                   gACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTg                                                                                                    <  2:3964017/150‑1 (MQ=255)

                                                   gACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTg                                                                                                    <  2:4356675/150‑1 (MQ=255)

                                                   gACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTg                                                                                                    >  1:215762/1‑150 (MQ=255)

                                                   gACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTg                                                                                                    <  1:1971292/150‑1 (MQ=255)

                                                         gTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGATGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CCGCCCCTTACCCAACCAACCACCGCCACGCCTGCCCAAGCAGCGCTGGCCACt                                                                                              >  1:2949267/1‑150 (MQ=255)

                                                           cTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTTCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCATACCAAACCAACCTCCGCCACGCCTGCCCAAGCAGAGCTGGCCACTgg                                                                                            >  1:971158/1‑150 (MQ=255)

                                                                ggcggTGACTGCGTGATCGCCAGGCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAAt                                                                                       <  1:3983603/150‑1 (MQ=255)

                                                                ggcggTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAAt                                                                                       <  1:3718527/150‑1 (MQ=255)

                                                                    gTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATcccc                                                                                   >  1:841449/1‑150 (MQ=255)

                                                                       aCTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCcgcg                                                                                >  1:3749668/1‑150 (MQ=255)

                                                                         tGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGcc                                                                              >  2:54598/1‑150 (MQ=255)

                                                                            gTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCctct                                                                           >  1:1468042/1‑150 (MQ=255)

                                                                            gTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCctct                                                                           >  2:2312154/1‑150 (MQ=255)

                                                                             tGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCtctc                                                                          >  1:246285/1‑150 (MQ=255)

                                                                             tGATCGCCAGCCTGTTCAGCGCCACACTGCGGGCCTTCTTTTTCGGCCTGCTGACCCTGCTCGCGGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCtctc                                                                          <  1:1216015/150‑1 (MQ=255)

                                                                              gATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCTGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTcc                                                                         <  1:591898/150‑1 (MQ=255)

                                                                              gATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTcc                                                                         <  1:3639613/150‑1 (MQ=255)

                                                                              gATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGACTTTTACGGCCTGCTGACCCTGCTCGCCGGAGATCCGGG‑CAGCCCCTTACCCAAACAACCTCCGCCACCCCTGCCCAAGCAGCGCTGGCCACGGGGCCATCCCCGCCCCTCTcc                                                                         >  1:2252683/1‑150 (MQ=255)

                                                                                  gCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCcgct                                                                     <  1:763945/150‑1 (MQ=255)

                                                                                   cccgCCTGGTCCGCGCCACCCGGCGGGCCGGCTTTGTCGGCCTGCTGCCCCGGCTCGCCGGCGCGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCcgctt                                                                    <  1:158199/147‑1 (MQ=255)

                                                                                   ccAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCcgctt                                                                    >  1:618191/1‑150 (MQ=255)

                                                                                    cAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCcgcttc                                                                   >  2:4246259/1‑150 (MQ=255)

                                                                                     aGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCcgcttcg                                                                  >  1:3097114/1‑150 (MQ=255)

                                                                                     aGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCcgcttcg                                                                  >  1:4072637/1‑150 (MQ=255)

                                                                                        cTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCcgcttcgctt                                                               <  1:3908189/150‑1 (MQ=255)

                                                                                          gTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTtct                                                             <  2:2906557/150‑1 (MQ=255)

                                                                                          gTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTtct                                                             >  1:756837/1‑150 (MQ=255)

                                                                                           ttCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTtctc                                                            <  2:3983625/150‑1 (MQ=255)

                                                                                           ttCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTtctc                                                            <  1:4424927/150‑1 (MQ=255)

                                                                                              aGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCCCTGGTCAATCCCCGCGCCTCTCCCGCTTCGCGTCTcgcg                                                         >  2:1604663/1‑150 (MQ=255)

                                                                                                cgcCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGtt                                                       <  2:1335822/150‑1 (MQ=255)

                                                                                                cgcCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGtt                                                       >  1:4477661/1‑150 (MQ=255)

                                                                                                 gcCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTc                                                      >  2:3686602/1‑150 (MQ=255)

                                                                                                   cacaCTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTg                                                    >  2:734072/1‑150 (MQ=255)

                                                                                                    acacTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGa                                                   <  2:2655551/150‑1 (MQ=255)

                                                                                                        tgctgGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATc                                               <  2:875760/150‑1 (MQ=255)

                                                                                                        tgctgGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATc                                               >  2:2678658/1‑150 (MQ=255)

                                                                                                           tgGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGcc                                            >  1:489667/1‑150 (MQ=255)

                                                                                                           tgGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGcc                                            <  2:609386/150‑1 (MQ=255)

                                                                                                             gCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCAc                                          >  2:2210528/1‑150 (MQ=255)

                                                                                                             gCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCAc                                          >  2:2430316/1‑150 (MQ=255)

                                                                                                             gCCGTCTTATTCGGCCTGCAGACCCTGCTCGCCGGCCAGCCGGG‑CAGCCCCGTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCCCAGGCCCCTGGGCCATCCCCGCGCCTCTCCCGCTGCGCGTCGCGCGGTCTGACAGCGCCAc                                          >  2:3381208/1‑150 (MQ=255)

                                                                                                               cGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGt                                        >  1:332158/1‑150 (MQ=255)

                                                                                                                gTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTc                                       >  1:2071971/1‑150 (MQ=255)

                                                                                                                   tttttCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTcccc                                    <  1:2666110/150‑1 (MQ=255)

                                                                                                                     tttCGGCCTGCTGACCCTGCTCGCCGGCGCGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGt                                  <  1:2220308/150‑1 (MQ=255)

                                                                                                                     tttCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGt                                  <  1:4114274/150‑1 (MQ=255)

                                                                                                                           ccTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAAACTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTgccgcc                            >  1:79659/1‑150 (MQ=255)

                                                                                                                               ctgACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGAt                        >  1:902486/1‑150 (MQ=255)

                                                                                                                               ctgACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGAt                        <  2:1688858/150‑1 (MQ=255)

                                                                                                                               ctgACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGAt                        >  2:1593721/1‑150 (MQ=255)

                                                                                                                                tgACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTc                                                      >  1:1341302/1‑119 (MQ=255)

                                                                                                                                ctgcccGGCTCGCCGGCGAGCAGGGTCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGAt                        >  2:3704254/4‑150 (MQ=255)

                                                                                                                                 tgcccGGCTCGCCGGCGAGCAGGGTCAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATc                       >  1:4017030/3‑150 (MQ=255)

                                                                                                                                    ccggCTCGCCGGCGAGCAGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCa                   >  2:1348228/4‑150 (MQ=255)

                                                                                                                                    ccTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCa                   >  1:3785699/1‑150 (MQ=255)

                                                                                                                                    ccTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCa                   >  2:1418972/1‑150 (MQ=255)

                                                                                                                                    ccTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTGCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCa                   >  1:1678219/1‑150 (MQ=255)

                                                                                                                                         tCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGCggg              >  1:2222614/1‑150 (MQ=255)

                                                                                                                                             cGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGCGGGCggg          >  1:609648/1‑148 (MQ=255)

                                                                                                                                             cGGCGAGCAGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGCGGGCgtg          >  1:3204384/1‑150 (MQ=255)

                                                                                                                                               gCGAGCCGGG‑CAGCCCCTTACCCCACCCACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGCGGGCGtgtg        <  2:957061/150‑1 (MQ=255)

                                                                                                                                               gCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGCGGGCGtgtg        <  2:1056678/150‑1 (MQ=255)

                                                                                                                                                cGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGCGGGCGTGTGc       <  2:334674/150‑1 (MQ=255)

                                                                                                                                                cGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGCGGGCGTGTGc       <  2:2344795/150‑1 (MQ=255)

                                                                                                                                                 gAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGCGGGCGTGTGCt      >  2:4392548/1‑150 (MQ=255)

CACGGCCGACAGCAGCGGCATGGTCCAAGGTGAGCAAGACTTCAGCGATCCGACCCTGTCTGCCGGCGGTGACTGCGTGATCGCCAGCCTGTTCAGCGCCACACTGCTGGCCGTCTTTTTCGGCCTGCTGACCCTGCTCGCCGGCGAGCCGGG‑CAGCCCCTTACCCAACCAACCTCCGCCACGCCTGCCCAAGCAGCGCTGGCCACTGGTCAATCCCCGCGCCTCTCCCGCTTCGCTTCTCGCGTTCTGACATCGCCACGTCCCCGTGCCGCCTGATCGGCAGCGGGCGTGTGCTCACC  >  NC_002947/3770091‑3770389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`