| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,778,338 | T→G | 16.9% | intergenic (+55/‑88) | PP_3338 → / → PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,778,338 | 0 | T | G | 16.9% | 256.7 / 14.3 | 125 | intergenic (+55/‑88) | PP_3338/PP_3339 | cytochrome bd‑type quinol oxidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (36/65); new base G (19/5); total (55/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.64e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 129 total aligned reads displayed.
TCGATCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCT > NC_002947/3778191‑3778487 | tCGATCATCATCTGGGAATCCGGATCGCCGCCCCAGAGCCAAGGGTTCTTGGTGTTAGTCTCTCTGTTCATCCTGCCCAGTTCGCTTGGCTGATGCGACTGTTGATGATGGACGCCGGCATGCGGTTCCATTGAGCCCTATACGTGGTgc < 1:392704/150‑1 (MQ=255)tCGATCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTgc < 2:522455/150‑1 (MQ=255)tCGATCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTgc < 1:2328606/150‑1 (MQ=255) aTCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGcc > 1:3055574/1‑150 (MQ=255) aTCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGcc > 1:702851/1‑150 (MQ=255) tCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGccg > 1:4132661/1‑149 (MQ=255) cAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTg < 1:1693769/150‑1 (MQ=255) gCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCg < 1:3364341/150‑1 (MQ=255) tCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGCCGGCggcc > 2:784770/1‑147 (MQ=255) tCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGGCa > 1:323206/1‑150 (MQ=255) tCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGCCa > 2:4073752/1‑150 (MQ=255) tCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACa > 1:3694609/1‑150 (MQ=255) cTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACaa < 1:1442938/150‑1 (MQ=255) gAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAg < 1:194330/150‑1 (MQ=255) gAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGACAAAAAg > 2:2796138/1‑150 (MQ=255) aaGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAgg < 2:1027273/150‑1 (MQ=255) aGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgc < 1:3971468/150‑1 (MQ=255) gCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgcg < 2:3644166/150‑1 (MQ=255) gCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGgcg < 1:4121997/150‑1 (MQ=255) cGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGca < 1:2338291/150‑1 (MQ=255) gCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGcac < 2:647164/150‑1 (MQ=255) cAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGcacc < 1:336665/150‑1 (MQ=255) gcgcCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGcaccac < 2:1979496/150‑1 (MQ=255) gccgccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACgg < 2:4137192/150‑1 (MQ=255) gccgccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACgg < 2:1985228/150‑1 (MQ=255) gccgccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGCCCAAAAGGCGCCCCACgg > 2:3217408/1‑150 (MQ=255) cgccCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGaa > 2:686009/1‑150 (MQ=255) cccAGAGCCAAGGCTTCATGCTGGTTGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGAGTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACtt < 2:1462517/150‑1 (MQ=255) ccAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACCAAAATGCGCCCCACCGAACtag > 2:3039322/1‑148 (MQ=255) ccAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCGACAAAAAAGCGCCCCACCGACCATGTaaacc > 1:878062/1‑146 (MQ=255) ccAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCAGCGACAAAAAAGCGCACCACCGAACATGTaaaac > 1:4400073/1‑146 (MQ=255) catggCTTCTGGCTGTTTGGCACACTGTACACCCGGCCCAGTTCGGTTGGCTGACCCGAGTGTTCATGTTGGCCGCCGCCATGCGCAGCAATTGAGCCCTCGCGGTGGTGCGCCTGCGAAAAAACGGCGCACCACGGAACTTGTACAGcc < 2:2003742/147‑1 (MQ=255) catggCTTCATGGTGGTAGGCACACTTTTCATCCTGCCCAGTTCGCTTGGCTTTTCCGACTGTTCATGTTGGCCGCCGGCTTGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGcc < 2:4272706/147‑1 (MQ=255) cAAGGCTTCATGCTGGTTGGAAAACTTTTCATCCTGCCCTTTTCGCTTGGCTTTTCCGAGTGTTCATGTTGGCCGCCGGCTTGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCTACAAAAAGGCGCACCACGGAACTTGTACAGcc < 2:3230899/150‑1 (MQ=255) cAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTAAAGcc > 2:3681425/1‑150 (MQ=255) cAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACCGACAGTGTACAGcc > 2:1707643/1‑150 (MQ=255) cAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAAGGCGCACCACGGAACATGTACAGcc > 2:3681288/1‑150 (MQ=255) cAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCGGCGACCAAAAGGCGCCCCCCCGAACATGTACAGcc > 2:1707661/1‑150 (MQ=255) aaGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCATCGACAAAAAGGCGCACCACGGAACATGTACAGccc > 2:1409973/1‑150 (MQ=255) aaGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCTGCGACAAAAAGGCGCCCCACCGAACAAGTAAAGccc > 1:642819/1‑150 (MQ=255) aGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCg < 2:4085356/150‑1 (MQ=255) ggCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAAGCGCACCACCCAACATGTAAAcccccc > 1:2900344/1‑148 (MQ=255) gCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGGCAAAAAGGCGCACCACGGAACATTTAAAGCCCGCAACCGaag > 2:85342/1‑148 (MQ=255) cTGGTAGCCACACTGTTCATCCTGCCCAGTTGGGTTGGCTGATCCGACTTTTCTTGATGGCCGCCGGCATGCGCTGCCATTTAGCCCTCGCGGTGGTGCGCCTGCTAAAAAACGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGc < 2:1306790/150‑1 (MQ=255) tGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGGGCCCAAAAAGCGCCCCACCGCACATGTACAACCCCCAAccgcatcg > 1:257716/1‑143 (MQ=255) cacaCTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGCCAAAAATGCGCACCCCCGAACATGTACAGCCCCCAACGGATTCGGCTTGAt > 2:536278/1‑150 (MQ=255) cacaCTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGCGCCTGCGCCAAAAAGGCGCACCACCCCACATGTAAAGCCCGCAACCGATGCGGCGTAAt > 2:2787428/1‑150 (MQ=255) acccggTTCATCCGGCCCTGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCGCGCCGTGGTGCGCCTGCGACAAACAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATg < 2:2347755/145‑1 (MQ=255) acTGTTCATCCTGCCCTGTTCGCTTGGCTGATCCGACTGTTCATGTGGGCCGCCGGCATGCGCAGCCTTTGAGCCGGCGCCGGGGTGCGCCTGCGACAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATgcg < 2:3855273/150‑1 (MQ=255) gTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAAAgcgcgc > 2:2541952/1‑150 (MQ=255) gTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGAGGGCCGCCGGCATGCGCAGCCATTGCGCCCTCGCCGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATgcgcgc < 2:1733299/150‑1 (MQ=255) gTTCATCCGGCCCTTTTCGCTTGGCTTATCCGACTTTTCATGTTGGCCGCCGGCATGCGCAGCCTTTGAGCCCTCGCGGTGGTGCGCCTGCTACAAAAAGGCGAACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATgcgcgc < 1:2588738/150‑1 (MQ=255) ttCATCCTGCCCTGTTCGGTTGGCTGAGCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCTTTGAGCCCTCGCCGTGGTGCGCCTGCCACAAAACGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGcc < 1:3358370/150‑1 (MQ=255) ttCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGCCAAAAAGGCGCACCCCCGCACGTGTACAGCCCCCAACCGATGCGGCGTAATGCGCGcc > 2:3395232/1‑150 (MQ=255) ttCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGGCGGCGGCCAAAAAGCGCACCACCGGACGTGTGAACCCCCCCACCGAGGCGGCGGAAGGCGCGcc > 1:3440111/1‑150 (MQ=255) tCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCGGCCGCAAAAAAGCGCACCACCCAACCTGTAAAGCCCCCCACCGAAGGGGCGTTATGGGCGcccaat > 1:1352498/1‑146 (MQ=255) ccTGCCCAGTTCGCTTGGCTTATCCGACTGTTCATGAGGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATAtt < 2:3260711/150‑1 (MQ=255) gCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAAGGCCCACCACCCAACATGTAAAACCCCCAACCGAAGCGGCGTAATTCGCGCCAAATTAGc > 2:3200009/1‑150 (MQ=255) gTTCGCTTGGCTGATCCGACTGTTCAGGATGGCCGCCCGCAGGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCCACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCggg < 1:1370586/150‑1 (MQ=255) gCTTGGCTGATCCGACTGTTCATGCTGGCCGCCGGCATGCGCAGCCTTTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGAc < 2:4160951/150‑1 (MQ=255) gCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGGCAAAAATGCGCCCCACCGAACGTGTTAAGCCCGCCACCGCAGCGGCTTAATTCGCGCCCAAATAGCGCGGGTggc > 1:3265108/1‑148 (MQ=255) gttGGCTGATCCGACTGTTCATTATGGCCGCCGGCATGCGCAGCCTTTGAGCCCTCGCCGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACt < 2:3088945/149‑1 (MQ=255) gttGGCTGACCGGCTTGTTCCTGTGGGCCGCCGGCATGCGCAGCATTTGCCCCCCCGCGGGGGGGCGCCTGCCAAAAACAGGCGCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACt < 1:268803/149‑1 (MQ=255) ttGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGCCAAAAAGGCGCCCCAACGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCCTATTCGCTCGGGTGACTc > 2:330435/1‑150 (MQ=255) ttGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCACCACCGCACGTGGACAGCCCGCAACGCCTGCGGCGTAATGCGCGCCAAAATCGCGCGGGTGAcgc > 2:4342383/1‑148 (MQ=255) ttGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCAGCGACAAAAAGGCGCACCACCGAACATGTAAACCCCCCAACCGCGGCCGCGTAAATCGCCCCAAAATCGCGCCGGTggaaa > 2:3910109/1‑146 (MQ=255) ggCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACCGAACATGTAAAGCCCGCAAAGGATTCGGGGTAATGCGCCCCCAATTGGCTCGGGTGAcaaaa > 2:3501630/1‑146 (MQ=255) gCTGATCGGATGTTTCATGTGGGCGGCGGGCATGCGCAGCCTTTGCGCCCGCGCGGTGGGGGGCCCGCCAAAAAACGCCCCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATg < 1:3194478/150‑1 (MQ=255) cTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGGGCCGGCGCCCAAAAGGCCCCCCACCGACCCTGTTCACCCCGCAAACGAAGCGGCGTAAAGAGCGCCAAATTATCGCGGGTGaaacaatc > 1:4422411/1‑143 (MQ=255) tCCGTCTGTTCCTGTGGCCCGCCGGCTGGCGCCGCCTTTGCCCCCGCGCGGTGGTGCGCCTGCCAAAAAAAGCCCCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTc < 1:1387079/150‑1 (MQ=255) tCCGACTGTTCATGTTGGCCGCCGGCATGCGCAGCCATTGCGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTc < 2:1284071/150‑1 (MQ=255) ccGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCACCACGGCACGTGTACAGCCCCCAACGCATGCGGCGTAATCCGCGCCCGATTAGCGCGGGTGACTCAGGCTGTca > 2:3180368/1‑150 (MQ=255) cGACTTTTCATGTTGGCCGCCGGCAGGCGCAGCAATTGAGCCCTCGCCGTGGTGCGCATGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTcac < 1:2573940/150‑1 (MQ=255) atgatgGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGGACTTTTAAAGCCCGCAACGGATGCGGGTTAAAGCGCCCCAAATTCGCTCGGGTGACAGATGCTTTcacgtgcacgtg > 2:2526254/1‑150 (MQ=255) atgatgGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCTGGGGCCAAAAGGCGCCCCCCCGCACTTTTAAACCCCCCCACGCATTCGGCTTAAATCGCGCCCAAATAGCTCCGGTGAATCATGCATTgaagggcacggg > 2:3791358/1‑148 (MQ=255) tgatgGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCGGCGACAAAAAGGCGCCCCACGGAACTTGTAAAGCCCCCAACGGGTGCGGCTTAATGCGCGCCAAATTAGCTCGGGTGACTCATGCGTTCacgtgcacgtgc > 2:2246923/1‑150 (MQ=255) gccgccGGCATGCGCAGCCATTGAGCCCTCGCCGTGGGGGGCCTGCGCCAAAAAGGCGCCCCACGGCACATGTAAAGCCCCCAACGGCTGCGGCGTAATGCGCGCCAAAATAGCACGGGGGTCGCATGCGTTAACGTGCACCGGcacaac > 2:2100570/1‑148 (MQ=255) cgccgGCATGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCGCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCtt < 2:1129759/150‑1 (MQ=255) gcgggCATGCGCAGCCATTGCGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:4466031/147‑1 (MQ=255) gcgggCAGGCGCCGCATTTGAGCCCGCGCGGTGGTGCGCCTGCCAAAAAATGCCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:2063360/147‑1 (MQ=255) gccgGCTTGCGCAGCCTTTTCGCCCCCGCCTTGGTGCGCCTGGGAAAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:1622067/150‑1 (MQ=255) gccgGCTTGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 1:4079991/150‑1 (MQ=255) gccgGCTTGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCttt < 2:3097968/150‑1 (MQ=255) cgGCATGCGCAGCCATTGAGCCCTCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGt < 2:2058682/150‑1 (MQ=255) gcctggcgcCGCCATTGCGCCCGGGCGGGGGGGCGCATGCCAAAAAACGGCCCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTc < 1:1629740/145‑1 (MQ=255) gaaTGCGCAGCCTTTGCGCCCTCGCGTTGGTGCGCCTGCAAAAAAAGGCCCCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCt < 1:1564591/148‑1 (MQ=255) tGCGCAGCATTTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGtt < 1:2201280/150‑1 (MQ=255) gcgcTGCCAGTGAGCCATCGCGGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTc < 2:546763/150‑1 (MQ=255) cATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCgcctgcc < 2:460141/150‑1 (MQ=255) ttGCGCCCGGGCGGTGGGGCGCCTGCCAAAAAACGGCCCCCCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTc < 1:169513/150‑1 (MQ=255) tGAGCCCTCGCCGTGGTGCGCCTGCGAAAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCg < 1:3714892/150‑1 (MQ=255) gcgCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGc < 2:889898/148‑1 (MQ=255) cccTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGt < 2:323206/150‑1 (MQ=255) cccTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGt < 2:3694609/150‑1 (MQ=255) cTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGc < 2:4223629/150‑1 (MQ=255) tCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCt < 2:1107190/150‑1 (MQ=255) ggggtggtgCGCCTGCGAAAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGt < 1:3310330/147‑1 (MQ=255) ccGTGGTGCGCGTGCTAAAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGtt < 2:391608/150‑1 (MQ=255) ggtgCGCCTGCGAAAAAATGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAAc < 2:960706/150‑1 (MQ=255) tgCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACct > 1:4173345/1‑150 (MQ=255) | TCGATCAGCATCTGGGAAGCCGCAGCGCCGCCCCAGAGCCAAGGCTTCATGCTGGTAGGCACACTGTTCATCCTGCCCAGTTCGCTTGGCTGATCCGACTGTTCATGATGGCCGCCGGCATGCGCAGCCATTGAGCCCTCGCCGTGGTGCGCCTGCGACAAAAAGGCGCACCACGGAACTTGTACAGCCCGCAACGGATGCGGCTTAATGCGCGCCATATTCGCTCGGGTGACTCATGCTTTCACGTGCACGTGCACATCTTTGTCTGTTCGCCTGCCTCGCCGTGCTGTTCAACCT > NC_002947/3778191‑3778487 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |