| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,051,879 | C→T | 15.4% | intergenic (+46/‑55) | quiA → / → oprB‑III | quinate dehydrogenase/carbohydrate‑selective porin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,051,879 | 0 | C | T | 15.4% | 314.6 / 44.5 | 130 | intergenic (+46/‑55) | quiA/oprB‑III | quinate dehydrogenase/carbohydrate‑selective porin |
| Reads supporting (aligned to +/- strand): ref base C (45/65); new base T (11/9); total (56/74) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 134 total aligned reads displayed.
TCTCGCCGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCC > NC_002947/4051733‑4052027 | tctcGCCGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGATTCGCGGGCAAGCCCGCTCCTACAGGGGCCTTGt < 2:775802/150‑1 (MQ=255)tctcGCCGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGATTCGCGGGCAAGCCCGCTCCTACAGGGGCCTTGt < 2:775779/150‑1 (MQ=255) ctcGCCGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTa < 1:1811494/150‑1 (MQ=255) ctcGCCGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTa < 1:1811518/150‑1 (MQ=255) ctcGCCGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTa < 2:3780645/150‑1 (MQ=255) ctcGCCGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTa < 1:1989781/150‑1 (MQ=255) tcGCCGAAGACCGGCAAGCCGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACGATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGccccgggag > 2:4045138/1‑145 (MQ=255) tcGCCGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGGAAGCCCGCTCCTACAAGGCCCCGGTAg > 1:85102/1‑150 (MQ=255) tcGCCGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAg < 1:2559829/150‑1 (MQ=255) gCCGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGa < 1:2335717/150‑1 (MQ=255) gCCGAAGACCGGCAAGCAGTACGTGGTGATCACTGCCGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAGGGGCCTTGTAGGa < 2:3100804/150‑1 (MQ=255) ccGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCGGTAGGAg > 2:1008437/1‑150 (MQ=255) cGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAGGGGCCTTGTAGGAGc < 1:1338627/150‑1 (MQ=255) cGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGc < 1:4169541/150‑1 (MQ=255) cGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGc < 1:3703590/150‑1 (MQ=255) cGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGc < 2:2480832/150‑1 (MQ=255) gAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCg < 1:4226130/150‑1 (MQ=255) gAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCg < 1:3001199/150‑1 (MQ=255) aaGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAGGGGCCTTGTAGGAGCgg < 2:500207/150‑1 (MQ=255) aaGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCgg < 1:705403/150‑1 (MQ=255) aaGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCgg < 2:3224275/150‑1 (MQ=255) aGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCggg < 1:922683/150‑1 (MQ=255) aGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCggg < 1:2715013/150‑1 (MQ=255) gACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAGGGGCCTTGTAGGAGCGGGc < 2:1274043/150‑1 (MQ=255) ccGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGCCCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑tt < 1:337172/150‑1 (MQ=255) ccGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑tt < 1:2341194/150‑1 (MQ=255) ggCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGc > 2:977515/1‑150 (MQ=255) gCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCgg > 1:579049/1‑143 (MQ=255) gtggtgATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACACGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGccc < 1:3710329/150‑1 (MQ=255) gATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTcca > 2:1559773/1‑148 (MQ=255) cACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑GTGCCCGCGAATGCCCCTCAAAGa > 2:1863906/1‑150 (MQ=255) cACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTATTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGa > 2:3803726/1‑150 (MQ=255) aCTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCGGTAGGAGCGGGC‑TTGCCCCCGAATGCCCCTCAAAGAc > 1:3351905/1‑150 (MQ=255) tgctgGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGATCGGGC‑TTGCCCGCGAATGCCCCACAAAGACaa > 2:916917/1‑150 (MQ=255) gtgGCGGCGCCCGCCTGTCGAGTGACGGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTTGGAGGGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAAcc < 1:190100/149‑1 (MQ=39) ctgGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTTATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAAcc < 2:1883094/150‑1 (MQ=255) ctgGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCGGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCCAAGACAAcc > 2:4326931/1‑150 (MQ=255) gcggcgCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCACAAAGACAACCCga > 2:2104543/1‑150 (MQ=255) gcggcgCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCGGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCga > 2:2166627/1‑150 (MQ=255) ggcgCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCCAGCCCGCGCCGAAAACGCCCCGGTAGGAGCGGGG‑GTGGCCGCCCAAGCCCCACCAAAACAACCCcaga > 1:2670609/1‑150 (MQ=255) ggcgCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCGCCAACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGGAAGCCCCGCAAATACAACCCgaga > 1:2151380/1‑150 (MQ=39) cccgccAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGGCACCCCCCTCCAAAAACGCCCCCGTAGGACCGGGCGTTGCCC‑CCAAAGCCCCGAAAAGACAAACCCAAAttaa > 1:4320159/1‑148 (MQ=255) cccgccAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCCCTCCTACAAGGCCCCGGTAGGAGCGGGC‑TTGCCCGCGCAATCCCCACAAAGAAAAACCCAGAGTCt > 1:4320401/1‑150 (MQ=38) cAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AAt < 2:2702388/150‑1 (MQ=255) gTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGc < 2:1961683/150‑1 (MQ=255) gTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGc < 2:1961694/150‑1 (MQ=255) gTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGc < 2:1172600/150‑1 (MQ=255) tCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCGACAAGGCCCCTGTAGGTGCGGGC‑TTGCCCGCGAATGACCCTCAAAGACAACCCGAGATTCTGT‑AATTcc > 2:3052229/1‑150 (MQ=255) gACTGCCCGTGGCGACTATTTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCACGCCCGCTCCTACAAGGCCCCGTTAGTAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCAt < 1:795254/150‑1 (MQ=255) cggACCGTGGCGACTATGTGATTTCTTACGCTCTGCCTTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATcc < 1:544712/148‑1 (MQ=255) aCCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCa < 2:2028679/150‑1 (MQ=255) gTGGCGACTTTGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAAtt < 2:720098/150‑1 (MQ=255) tGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTTTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTc < 1:1970463/150‑1 (MQ=255) gCGACTATGTGTTTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTCCACGGCCCCTGTTGGAGCGGGC‑TGGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGc < 1:3052229/150‑1 (MQ=39) cGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCa < 1:2924506/150‑1 (MQ=255) gACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCACCGACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCGCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAAATCGCAt > 2:1716772/1‑150 (MQ=255) tttCTTCCGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCAcc < 1:2372444/150‑1 (MQ=255) tttCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCAcc < 1:2372442/150‑1 (MQ=255) ttACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCctgc < 2:4425376/150‑1 (MQ=255) ttACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCCCTCCAACAAGGCCCCCGTAGGCGCGGGG‑TTGCCCGCGCCATCCCCTCAAAGACAACCCCAGCTTGTGTAAATCCCAACC‑CAAATCGCAAAACCCCCACCcagc > 1:3055054/1‑150 (MQ=255) ccGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACACGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGctggccct < 2:1798943/150‑1 (MQ=255) ccGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGctggcccn < 1:1819990/150‑2 (MQ=255) cGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGctggccctg < 2:60395/150‑1 (MQ=255) cGTAAAACCGCGTCGCCTGCTTCGCGCGCAAGCCCGCTCCTACCCGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAAGGCCCCTCAACGCCAACCCGAGATTCTGT‑AAGGCCATCCGCAATTCGCATCACCCCCACCCTGCTGctggccctg < 1:2988083/150‑1 (MQ=38) gTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCaa > 2:4018680/1‑84 (MQ=255) gTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCaa < 1:4018680/84‑1 (MQ=255) aaCCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAg < 1:2630559/150‑1 (MQ=255) ccGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGca > 2:2609129/1‑150 (MQ=255) gcgTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACCAGGCCCCGGTGGGCGCGGGC‑GTGCCCGCGAATGCCCCTCAAAGACCACACGAGATTCGGT‑AAAGCCATCCGCACTTCGCATCACCCCCCACCTGCTGCTGGCCCTGGGCCGcacc > 2:3853718/1‑150 (MQ=255) cgTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGcacca < 2:3579846/150‑1 (MQ=255) cgTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGcacca < 2:684378/150‑1 (MQ=255) cgTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGGAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAACGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGcacca < 1:1442975/150‑1 (MQ=255) tCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACACCCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACt < 2:358426/150‑1 (MQ=255) gCCTGCTTCGCGGGCAAGCCCGCTCCTACCAGGCCCCGGTAGGAGCGGGC‑GTGCCCGCGGATGCCCCGCCAAGACACCCCGCGCTTCTGT‑CATGCCATCCGCCATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACGGc > 2:3548184/1‑150 (MQ=255) aGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAt < 2:1299538/150‑1 (MQ=255) aGCCCGCTCCTACAAGCCCCCTGTAGGAGGGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAt < 1:916917/150‑1 (MQ=255) gCCCGCTCCTACAGGGGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtc > 2:3436903/1‑150 (MQ=255) cccGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtct > 1:3422300/1‑150 (MQ=255) ccGCTCCTACAGGGGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtctc > 2:3465080/1‑150 (MQ=255) ccGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGTCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCACATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACGGCCCTTGCCAGCGACGAtctc > 2:518853/1‑150 (MQ=255) ccGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtctc > 1:1701966/1‑150 (MQ=255) ccGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGAtctc < 2:2448484/150‑1 (MQ=255) gCTCCTACAGGGGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 2:2850377/1‑150 (MQ=255) gCTCCTACAGGGGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 2:817668/1‑150 (MQ=255) gCTCCTACAGGGGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 1:777373/1‑150 (MQ=255) gCTCCTACAGGGGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 1:3444496/1‑150 (MQ=255) gCTCCTACAGGGACCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 1:3506980/1‑150 (MQ=255) gCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 2:4053311/1‑150 (MQ=255) gCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCAt > 2:1008350/1‑150 (MQ=255) cTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATg > 2:452697/1‑150 (MQ=255) tCCTACAGGGGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGa > 2:2097157/1‑150 (MQ=255) cTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGAcc > 1:2260864/1‑150 (MQ=255) cTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGAcc > 2:1647476/1‑150 (MQ=255) aCAGGGGCCTTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCg > 1:2163358/1‑150 (MQ=255) aCAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGctggccctggc < 2:4299785/111‑1 (MQ=255) aCAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGctggccctggc > 1:4299785/1‑111 (MQ=255) aCAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCg > 1:646119/1‑150 (MQ=255) gCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCgcagca > 2:3148924/1‑150 (MQ=255) ccTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCAccc > 1:2229888/1‑150 (MQ=255) ccTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCAccc > 2:3384698/1‑150 (MQ=255) | TCTCGCCGAAGACCGGCAAGCAGTACGTGGTGATCACTGCTGGCGGCGCCCGCCAGTCGACTGACCGTGGCGACTATGTGATTTCTTACGCTCTGCCGTAAAACCGCGTCGCCTGCTTCGCGGGCAAGCCCGCTCCTACAAGGCCCCTGTAGGAGCGGGC‑TTGCCCGCGAATGCCCCTCAAAGACAACCCGAGATTCTGT‑AATGCCATCCGCAATTCGCATCACCCCCACCCTGCTGCTGGCCCTGGCCAGCACCACTGCCCTTGCCAGCGACGATCTCATGACCCGCAGCACCC > NC_002947/4051733‑4052027 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |