BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	4,377,412	T→G	5.4%	R30R (CGA→CGC)	PP_5637 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	4,377,412	0	T	G	5.4%	811.0 / 24.2	234	R30R (CGA→CGC)	PP_5637	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (111/110); new base G (10/3); total (121/113)
Fisher's exact test for biased strand distribution p-value = 8.58e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 237 total aligned reads displayed.

ACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGAT  >  NC_002947/4377264‑4377561

acGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTc                                                                                                                                                      >  2:543073/1‑150 (MQ=255)

acGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTc                                                                                                                                                      <  2:1397608/150‑1 (MQ=255)

     tGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGAccc                                                                                                                                                 >  1:2488873/1‑150 (MQ=255)

      gcgcATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGAGTCGCGACCCa                                                                                                                                                <  1:2245544/150‑1 (MQ=255)

        gcATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCaga                                                                                                                                              <  1:2900747/150‑1 (MQ=255)

          atatAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCT‑GGTCGCGACTCGACCCAGAGGc                                                                                                                                           >  2:913173/1‑150 (MQ=255)

            ataGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCt                                                                                                                                          <  2:600712/150‑1 (MQ=255)

                  cGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCtgt                                                                                                                                    >  2:1277553/1‑150 (MQ=255)

                    ccTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGa                                                                                                                                  <  2:2274443/150‑1 (MQ=255)

                    ccTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGa                                                                                                                                  <  2:2717159/150‑1 (MQ=255)

                     cTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGAt                                                                                                                                 <  2:4446391/150‑1 (MQ=255)

                      ttCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATg                                                                                                                                >  2:3476657/1‑150 (MQ=255)

                      ttCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCAGCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATg                                                                                                                                >  2:3917537/1‑150 (MQ=255)

                         gACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTc                                                                                                                             <  2:328422/150‑1 (MQ=255)

                         gACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTc                                                                                                                             >  2:201825/1‑150 (MQ=255)

                          aCCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCg                                                                                                                            >  2:4397353/1‑150 (MQ=255)

                           ccTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGc                                                                                                                           <  2:2525666/150‑1 (MQ=255)

                           ccTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGc                                                                                                                           >  2:514310/1‑150 (MQ=255)

                            ctctTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGcc                                                                                                                          >  1:3570617/1‑150 (MQ=255)

                               ttctACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAAt                                                                                                                       >  1:3127267/1‑150 (MQ=255)

                                tctACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAAtg                                                                                                                      >  1:551988/1‑150 (MQ=255)

                                    ccccGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGa                                                                                                                  >  2:2253894/1‑150 (MQ=255)

                                    ccccGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGa                                                                                                                  >  1:207139/1‑150 (MQ=255)

                                     cccGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGAc                                                                                                                 <  1:2541904/150‑1 (MQ=255)

                                     cccGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGAc                                                                                                                 >  2:3622168/1‑150 (MQ=255)

                                     cccGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGAc                                                                                                                 >  1:336892/1‑150 (MQ=255)

                                      ccGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACg                                                                                                                >  1:270085/1‑150 (MQ=255)

                                        gttgatgttgatGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTc                                                                                                              >  1:1005226/1‑150 (MQ=255)

                                         ttgatgttgatgCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTcc                                                                                                             <  2:434113/150‑1 (MQ=255)

                                         ttgatgttgatgCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTcc                                                                                                             <  1:543073/150‑1 (MQ=255)

                                             tgttgatgCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGCCGCCAATGTGGACGTCcgcgc                                                                                                         <  2:3151944/150‑1 (MQ=255)

                                              gttgatgCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCcgcgcg                                                                                                        >  2:1185240/1‑150 (MQ=255)

                                              gttgatgCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCcgcgcg                                                                                                        <  1:3978184/150‑1 (MQ=255)

                                                tgatgCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGa                                                                                                      >  2:4308254/1‑150 (MQ=255)

                                                tgatgCCGAGCTGGCCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGa                                                                                                      <  1:1704892/150‑1 (MQ=255)

                                                 gatgCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAg                                                                                                     >  1:3764019/1‑150 (MQ=255)

                                                   tgCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTTGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAggg                                                                                                   <  1:2270826/150‑1 (MQ=255)

                                                   tgCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAggg                                                                                                   >  2:3714278/1‑150 (MQ=255)

                                                   tgCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAggg                                                                                                   >  2:1006620/1‑150 (MQ=255)

                                                      cGAGCTGGGCCATGCCTTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCt                                                                                                <  1:797500/150‑1 (MQ=255)

                                                      cGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCt                                                                                                >  2:1635099/1‑150 (MQ=255)

                                                      cGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCt                                                                                                <  2:2491272/150‑1 (MQ=255)

                                                       gAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGTATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTg                                                                                               <  1:2943962/150‑1 (MQ=255)

                                                       gAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCTGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTg                                                                                               <  1:2282913/150‑1 (MQ=255)

                                                             ggCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACttt                                                                                         >  1:2553711/1‑150 (MQ=255)

                                                               ccATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTcc                                                                                       <  1:2628882/150‑1 (MQ=255)

                                                               ccATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTcc                                                                                       >  1:2749994/1‑150 (MQ=255)

                                                               ccATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTcc                                                                                       <  1:370501/150‑1 (MQ=255)

                                                                  tGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTa                                                                                    <  1:2713418/150‑1 (MQ=255)

                                                                     cggtgcccTTCGCCTCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAACCACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGc                                                                                 <  2:3009668/144‑1 (MQ=255)

                                                                     cGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGc                                                                                 >  1:9548/1‑150 (MQ=255)

                                                                      gTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCg                                                                                <  1:929316/150‑1 (MQ=255)

                                                                      gTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCg                                                                                <  2:150112/150‑1 (MQ=255)

                                                                        tgcccTTCGCAGGGTGCAGGCGGGGGATACGGTCGGGCCCGGGGGTCGGGTTAAACCCCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGt                                                                              <  1:3071872/147‑1 (MQ=255)

                                                                          aCCTTCGCATCGGGCAGCCGGGGGAGAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCt                                                                            <  2:2667003/150‑1 (MQ=255)

                                                                            cTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGa                                                                          >  1:1334211/1‑150 (MQ=255)

                                                                                gCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGc                                                                      <  1:3714574/150‑1 (MQ=255)

                                                                                    cGTGCAGCCGGGGGATAATGTCGGGCCCCGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAgg                                                                  <  1:1402233/150‑1 (MQ=255)

                                                                                         aGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACg                                                             <  2:2606659/150‑1 (MQ=255)

                                                                                            cGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCa                                                          <  1:150685/150‑1 (MQ=255)

                                                                                             gggggATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCAt                                                         >  2:49089/1‑150 (MQ=255)

                                                                                             gggggATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCAt                                                         >  2:2956090/1‑150 (MQ=255)

                                                                                                ggATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCt                                                      >  2:3268397/1‑150 (MQ=255)

                                                                                                 gATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTc                                                     >  2:649352/1‑150 (MQ=255)

                                                                                                 gATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTc                                                     <  1:4073538/150‑1 (MQ=255)

                                                                                                 gATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTGTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTc                                                     >  2:3685958/1‑150 (MQ=255)

                                                                                                   tAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTcgc                                                   <  2:1781923/150‑1 (MQ=255)

                                                                                                   tAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTcgc                                                   <  2:3496588/150‑1 (MQ=255)

                                                                                                     aTGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCgcgg                                                 <  2:2824272/150‑1 (MQ=255)

                                                                                                      tGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCgcggc                                                >  1:2436208/1‑150 (MQ=255)

                                                                                                        tCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGt                                              >  1:2194990/1‑150 (MQ=255)

                                                                                                        tCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGt                                              <  1:1871935/150‑1 (MQ=255)

                                                                                                        tCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGt                                              <  1:1872157/150‑1 (MQ=255)

                                                                                                          gggCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCg                                            >  1:462565/1‑150 (MQ=255)

                                                                                                            gCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGaa                                          <  1:381761/150‑1 (MQ=255)

                                                                                                             cccAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAAc                                         <  2:1703914/150‑1 (MQ=255)

                                                                                                              ccAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACg                                        >  1:1099216/1‑150 (MQ=255)

                                                                                                               cAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACga                                       >  2:3230578/1‑150 (MQ=255)

                                                                                                                  gCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAgaa                                    <  2:4232990/150‑1 (MQ=255)

                                                                                                                   cGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAgaag                                   <  2:3800074/150‑1 (MQ=255)

                                                                                                                      aGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAgaaggaa                                <  1:4258771/150‑1 (MQ=255)

                                                                                                                        ggTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGt                              <  2:631062/150‑1 (MQ=255)

                                                                                                                          ttAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTAc                            >  2:8038/1‑150 (MQ=255)

                                                                                                                          ttAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTAc                            >  1:2885126/1‑150 (MQ=255)

                                                                                                                            aaaCACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACAt                          >  2:724027/1‑150 (MQ=255)

                                                                                                                              acacCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGc                        >  1:4451258/1‑150 (MQ=255)

                                                                                                                                acCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCgg                      <  2:1946505/150‑1 (MQ=255)

                                                                                                                                 cccAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCGGc                     >  2:1303103/1‑150 (MQ=255)

                                                                                                                                   cAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCGGCAc                   <  1:1766858/150‑1 (MQ=255)

                                                                                                                                     cctcTGGGTCGAGTCGCGACCCAGGGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCGGCACCa                 >  1:3603859/4‑150 (MQ=255)

                                                                                                                                     cctcTGGGTCGAGTCGCGACCCAGGGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCGGCACCa                 >  2:898407/4‑150 (MQ=255)

                                                                                                                                     cctcTGGGTCGAGTCGCGACCCAGGGGCTCGCGGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCGGCACCa                 >  2:3166711/4‑150 (MQ=255)

                                                                                                                                       tcTGGGTCGAGTCGCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGTGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCGGCACCAAt               >  2:2310882/2‑150 (MQ=255)

                                                                                                                                          gggTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCGGCACCAATACt            <  1:1897115/150‑1 (MQ=255)

                                                                                                                                          gggTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCGGCACCAATACt            >  2:3411641/1‑150 (MQ=255)

                                                                                                                                            gTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCGGCACCAATACTGt          >  2:412198/1‑150 (MQ=255)

                                                                                                                                            gTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCGGCACCAATACTGt          <  1:1112740/150‑1 (MQ=255)

                                                                                                                                               gcgACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCGGCACCAATACTGtata       >  1:1309715/1‑150 (MQ=255)

                                                                                                                                                 gACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATaaa     <  2:1068786/150‑1 (MQ=255)

                                                                                                                                                    tCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGAt  >  1:3860657/1‑150 (MQ=255)

ACGACTGCGCATATAGCACGCCTTCGACCTCTTCTACCCCGTTGATGTTGATGCCGAGCTGGGCCATGCCGTTGACCTTCGCATCGTGCAGCCGGGGGATAATGTCGGGCCCAGGCGTAGGGTTAAACACCCAGGCCTGGGTCGCGACTCGACCCAGAGGCTCGCTGTGATGGTCGCCAATGTGGACGTCCGCGCGGAGGGGCTGGACTTTCCGTAGGCGGTCTGAGGGCAAGGCCACGCCATGCTCGCGGCGTCGAACGAGAAGGAAGTACATGCGGCACCAATACTGTATAAAGAT  >  NC_002947/4377264‑4377561

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`