| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,433,489 | G→A | 6.5% | T63T (ACG→ACA) | PP_3926 → | short‑chain dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,433,489 | 0 | G | A | 6.5% | 733.0 / 26.6 | 231 | T63T (ACG→ACA) | PP_3926 | short‑chain dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (77/139); new base A (5/10); total (82/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 234 total aligned reads displayed.
GCCTTTGTTTCCGGCGCCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGCAATGTGCTGGACACCGACCCAGGGGCGT > NC_002947/4433340‑4433637 | gCCTTTGTTTCCGGCGCCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACg < 1:1844361/150‑1 (MQ=255) ccTTTGTTTCCGGCGCCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCTTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACgg < 2:2020556/150‑1 (MQ=255) ttGTTTCCGGCGCCAGCCGTGGAATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCATGGGGCCCTTGTGATCGTTTCCAGCCGCAAGCTTGACGGGGGCCAGCTGGGGGCCGACGCAATCATTGCCGCCGGCGGCAAGGCCACGGCtg < 1:87390/150‑1 (MQ=255) ttCCGGCGCCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCTGGCGGCAAGGCCACGGCTGTGGc > 1:2533321/1‑150 (MQ=255) ttCCGGCGCCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGc < 2:3722297/150‑1 (MQ=255) ccGGCGCCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑t > 1:3673665/1‑150 (MQ=255) cGGCGCCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCATGGGGCCCTTGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCTGGTGGCCGACGCCATCTTTGCCGCCGGCGGCAAGGCCACAGCCGTGGCC‑tt < 1:1765938/150‑2 (MQ=255) cGGCGCCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑Tg > 1:3636180/1‑150 (MQ=255) cGGCGCCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑Tg > 2:2340379/1‑150 (MQ=255) cGGCGCCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑Tg < 2:1364715/150‑1 (MQ=255) ggCGCCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCATGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCTGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACAGCCGTGGCC‑ttg < 2:2406568/150‑3 (MQ=255) ggCGCCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGC‑AGGCCACAGCCGTGGCC‑ttgc < 1:210884/150‑4 (MQ=255) gcgcCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCATGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGAGGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGcc < 1:4481223/150‑1 (MQ=255) gcgcCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGcc < 2:1827877/150‑1 (MQ=255) gcgcCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGC‑AGGCCACAGCCGTGGCC‑ttgcc < 2:1239573/150‑5 (MQ=255) gcgcCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGC‑AGGCCACAGCCGTGGCC‑ttgcc < 2:4445651/150‑5 (MQ=255) gCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTg < 2:3569262/150‑1 (MQ=255) gCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTg < 2:3198649/150‑1 (MQ=255) gCCGGGGCCTCGGCGAGGCCAGCGCCCACTTGCTCGCGCAGCATGGGGCCCTTGTGTTCGTTTCCAGCCGCAAGCTTGAGGGGTGCCAGCTGGTGGCCGACGCCATCATTGCCGCCGGGGGCAAGGCCACGGCTGTGGCC‑TGCCACATTg < 1:2008254/150‑1 (MQ=255) ccGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTgg < 2:909091/150‑1 (MQ=255) ggCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAg < 1:4518624/150‑1 (MQ=255) cATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCt < 1:1567291/150‑1 (MQ=255) cATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTACCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCt < 2:2813987/150‑1 (MQ=255) aTCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTg < 2:2930934/150‑1 (MQ=255) tCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTgg > 2:2949351/1‑150 (MQ=255) tCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCACAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTgg > 2:2374449/1‑150 (MQ=255) cGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGa < 2:4371866/150‑1 (MQ=255) ggCGTGGCCAACGCCCACTTGCTCGCGCAGCAAGGGGCCCAGGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCCGGTGGCCGACGCCATCTTTGCCGCCGCCGCCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGaa < 1:1559526/150‑1 (MQ=255) gCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAAc < 1:4459384/150‑1 (MQ=255) gCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAAc > 1:740516/1‑150 (MQ=255) cGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCCTGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACa < 2:3243356/150‑1 (MQ=255) aGGCCATCGCCCACGTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGa < 2:2720954/150‑1 (MQ=255) aGGCCATCGCCCACGTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGa < 1:4145555/150‑1 (MQ=255) aGGCCATCGCCCACGTGCGCGCGCAGCAAGGGGCCCATGTGTTCGTTTCCAGCCGCATGCTTGCCGGGTGCCAGCTGGTGGCCGCCGCCATCATGGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGa < 1:2156272/150‑1 (MQ=255) gCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCTTGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCCGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGAtt < 1:67222/150‑1 (MQ=255) gCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGAtt < 1:217842/150‑1 (MQ=255) gCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGAtt < 1:4091098/150‑1 (MQ=255) tCGCCCACTTGCTCGCGCAGCTTGGGGCCCATTTGTTCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCCGGTGGCCGACTCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTcagc < 1:2324293/150‑1 (MQ=255) tCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTcagc > 1:4447282/1‑150 (MQ=255) gCCCACTTGCTCGCGCATCAAGGGGCCCATGTCATCGTTTCCACCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCCACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTcagcag < 1:3120195/150‑1 (MQ=255) gCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTcagcag < 2:4133473/150‑1 (MQ=255) gCCCACTTGCTCGCGAAGCACGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATGGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTcagcag < 1:1084573/150‑1 (MQ=255) gCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGc > 2:1079239/1‑150 (MQ=255) gCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGc < 2:540092/150‑1 (MQ=255) gcagcaAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCAt > 1:3410383/1‑150 (MQ=255) agcaAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTc < 2:3071196/150‑1 (MQ=255) agcaAGGGGCCCAGGTGAGCGTTCCCAGCCGCCCGCTTGACGGGGGCCCGCAGGTGGCCGCCGCCATCAGTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTc < 1:4256143/150‑1 (MQ=255) caAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTcgc < 1:3342250/150‑1 (MQ=255) caAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCA‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTcgc < 2:1184554/150‑1 (MQ=255) caAGGGGCCCATGTGATCGTTGCCAGCCGCAAGCTTGACGGGTGCCAGCCGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTcgc < 1:2424179/150‑1 (MQ=255) aGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCCGGGGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATGGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGa < 2:4113089/150‑1 (MQ=255) ggggCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGaa < 1:1204909/150‑1 (MQ=255) ggggCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGaa > 1:2881927/1‑150 (MQ=255) ggggCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGaa < 2:3943827/150‑1 (MQ=255) cccATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGt > 1:1029042/1‑150 (MQ=255) cATTTGATCGTTTCCAGCCGCACGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCGGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTc < 1:2934861/150‑1 (MQ=255) cATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTc < 2:3505893/150‑1 (MQ=255) aTGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCCTTCGCGAACAGTTCg > 2:3644888/1‑150 (MQ=255) tgtgATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCgg < 1:1819218/150‑1 (MQ=255) tgATCGTTTCCCGCCGCAAGCTTGCCGGGTGCCCGCCGGTGGCCGACGCCACCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGc < 1:1279502/150‑1 (MQ=255) tgATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGc < 2:798337/150‑1 (MQ=255) tgATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGc < 2:1985378/150‑1 (MQ=255) gTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTg < 2:1465373/150‑1 (MQ=255) aGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTg < 2:3112392/150‑1 (MQ=255) aGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTg > 2:4195675/1‑150 (MQ=255) gCCGCACGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGc < 1:2566824/150‑1 (MQ=255) ccGCCAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCt < 2:3313526/150‑1 (MQ=255) ccGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCt > 1:1594713/1‑150 (MQ=255) cGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTg < 2:2489287/150‑1 (MQ=255) cGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTg < 2:1666500/150‑1 (MQ=255) gCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTgg > 1:3560848/1‑150 (MQ=255) cAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGt > 1:4063168/1‑150 (MQ=255) aaGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTc < 2:2264559/150‑1 (MQ=255) gCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTcaa < 2:611354/150‑1 (MQ=255) tGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTcaacaa > 1:2740689/1‑150 (MQ=255) tGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCTAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGcc < 1:4004713/150‑1 (MQ=255) tGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCGAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGcc > 2:481480/1‑150 (MQ=255) ccAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGTTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGccac < 1:2448450/150‑1 (MQ=255) cagcagGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGccacc > 2:2172219/1‑150 (MQ=255) gcagGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCaa > 2:2617679/1‑150 (MQ=255) cagGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAAc < 2:1689970/150‑1 (MQ=255) ggTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAAccc < 1:4348201/150‑1 (MQ=255) gCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCaa > 2:3800642/1‑150 (MQ=255) ccGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAAt > 2:309595/1‑150 (MQ=255) gCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGc < 1:1431772/150‑1 (MQ=255) gCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGc < 2:2103158/150‑1 (MQ=255) catcatTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGCaa > 2:1040500/1‑150 (MQ=255) catcatTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGCaa > 1:4197643/1‑150 (MQ=255) atcatTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGCAAt > 1:3005381/1‑150 (MQ=255) atcatTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAAGTCTGCAAt > 2:3760708/1‑150 (MQ=255) cttGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGCAAtgtg > 2:879219/2‑150 (MQ=255) tGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGCAATGTGCt < 2:920468/150‑1 (MQ=255) gccgccGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAGCAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGCAATGTGCTg < 1:3259718/150‑1 (MQ=255) ccgGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGCAATGTGCTGGaca < 1:939383/150‑1 (MQ=255) tggcaGGCCACAGCCGTGGCCTTGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGCACTGTGCTGGACACCGa > 2:2866430/5‑150 (MQ=255) tggcaGGCCACAGCCGTGGCCTTGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGCAATGTGCTGGACACCGa > 2:791195/5‑150 (MQ=255) aGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGCAATGTGCTGGACACCGACCCAg < 2:1577445/150‑1 (MQ=255) ggCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGCAATGTGCTGGACACCGACCCAgg < 1:2501341/150‑1 (MQ=255) ccACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGCAATGTGCTGGACACCGACCCAgggg > 1:3196159/1‑150 (MQ=255) cACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGCAATGTGCTGGACACCGACCCAGGGGc > 1:598433/1‑150 (MQ=255) | GCCTTTGTTTCCGGCGCCAGCCGTGGCATCGGCGAGGCCATCGCCCACTTGCTCGCGCAGCAAGGGGCCCATGTGATCGTTTCCAGCCGCAAGCTTGACGGGTGCCAGCAGGTGGCCGACGCCATCATTGCCGCCGGCGGCAAGGCCACGGCTGTGGCC‑TGCCACATTGGTGAGCTGGAACAGATTCAGCAGGTGTTCGCCGGCATTCGCGAACAGTTCGGGCGACTGGACGTGCTGGTCAACAATGCAGCCACCAACCCGCAATTCTGCAATGTGCTGGACACCGACCCAGGGGCGT > NC_002947/4433340‑4433637 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |