| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,498,634 | A→G | 5.6% | intergenic (+18/+34) | PP_3987 → / ← PP_5651 | site‑specific recombinase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,498,634 | 0 | A | G | 5.6% | 644.2 / 16.8 | 197 | intergenic (+18/+34) | PP_3987/PP_5651 | site‑specific recombinase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (92/93); new base G (5/6); total (97/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.22e-01 | |||||||||||
Only 100 of 199 total aligned reads displayed.
GACATACGCCCCAAGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTGCCAGAGCT > NC_002947/4498485‑4498782 | gACATACGCCCCAAGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTa > 1:4436300/1‑150 (MQ=255) gCCCCAAGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTccc > 1:63255/1‑150 (MQ=255) ccccAAGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTcccc > 1:652323/1‑150 (MQ=255) cccAAGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCg > 1:3372497/1‑150 (MQ=255) cccAAGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCg > 1:3626053/1‑150 (MQ=255) cccAAGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCg < 2:1396796/150‑1 (MQ=255) ccAAGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGc > 2:3388201/1‑150 (MQ=255) ccAAGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGc > 1:3879165/1‑150 (MQ=255) cAAGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCt > 1:430787/1‑150 (MQ=255) aaGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCtt > 1:2676481/1‑150 (MQ=255) aGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGAGCGTACCCCGCttc < 1:3484358/150‑2 (MQ=255) aGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCAAAGCGGGGAGCGTACCCCGCttc < 1:1116863/150‑2 (MQ=255) gcggcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACCCGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGa < 1:2386513/150‑1 (MQ=255) gcggcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGa < 2:2153471/150‑1 (MQ=255) gcggcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGa < 1:4391116/150‑1 (MQ=255) gcggcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGa < 1:1739282/150‑1 (MQ=255) gcggcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGa < 1:1840171/150‑1 (MQ=255) gcggcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGa < 1:313486/150‑1 (MQ=255) cggcAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAg < 2:2843481/150‑1 (MQ=255) cAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGcac > 2:3300926/1‑150 (MQ=255) cAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGcac > 1:2741674/1‑150 (MQ=255) aaGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCAAAGCGGGGAGCGTACCCCGCTTCGaattac < 2:2291406/150‑6 (MQ=255) gCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAAt < 1:3023430/150‑1 (MQ=255) cGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAAtt < 1:1099455/150‑1 (MQ=255) gAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTc > 1:3508560/1‑150 (MQ=255) ggCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACt > 1:821526/1‑150 (MQ=255) ggCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACt > 1:3918534/1‑150 (MQ=255) gATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGAt < 1:3407836/150‑1 (MQ=255) gggTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTAtt < 2:1776651/150‑1 (MQ=255) gggTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTAtt < 2:2178872/150‑1 (MQ=255) gTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGa < 1:1237946/150‑1 (MQ=255) tCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAg > 2:4209892/1‑150 (MQ=255) tCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAg > 2:690706/1‑150 (MQ=255) tCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAg > 1:4159239/1‑150 (MQ=255) cGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCta < 1:1193544/150‑1 (MQ=255) aaGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATAc < 1:767538/150‑1 (MQ=255) aGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACg > 1:4060652/1‑150 (MQ=255) gccTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCAtt > 1:2335442/1‑150 (MQ=255) ggTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAAt < 2:3727243/150‑1 (MQ=255) ggTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAAt > 2:3544190/1‑150 (MQ=255) acacTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTa < 1:1791629/150‑1 (MQ=255) acTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGc > 2:2430822/1‑150 (MQ=255) acTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGc > 2:4463141/1‑150 (MQ=255) tGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCtt > 2:2809173/1‑150 (MQ=255) cAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTtgct < 2:1996793/150‑1 (MQ=255) gcATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGctct < 2:976563/150‑1 (MQ=255) cATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTg > 2:2635332/1‑150 (MQ=255) tCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACGCGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGcc > 2:2094611/1‑150 (MQ=255) tCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCAGcc > 1:250128/1‑150 (MQ=255) acacaAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCAc < 1:1515025/150‑1 (MQ=255) acaAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCAccc > 2:3425404/1‑150 (MQ=255) acaAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCAccc > 1:1378175/1‑150 (MQ=255) aaaCGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCaa > 2:2764567/1‑150 (MQ=255) aCGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCAGAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAatc < 1:1322276/150‑1 (MQ=255) cGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAatca < 2:1413103/150‑1 (MQ=255) atataGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATcatcat < 2:1154425/150‑1 (MQ=255) tataGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATa < 2:1579179/150‑1 (MQ=255) ataGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAg < 1:2831311/150‑1 (MQ=255) ataGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTGTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAg > 1:228140/1‑150 (MQ=255) aCGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGttt > 1:980950/1‑150 (MQ=255) aCGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGttt < 2:2397660/150‑1 (MQ=255) gAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCg > 2:4090314/1‑150 (MQ=255) aGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCga < 1:3525027/150‑1 (MQ=255) aGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCga < 2:1261204/150‑1 (MQ=255) tAGGTGAAATAGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCTCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCgaga < 2:151767/150‑1 (MQ=255) aGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCgagag < 1:1346190/150‑1 (MQ=255) gTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGaa > 1:4410342/1‑150 (MQ=255) gAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATa > 1:2517596/1‑150 (MQ=255) tCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTc < 2:652323/150‑1 (MQ=255) tCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTc < 1:1763530/150‑1 (MQ=255) cGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCg < 1:658254/150‑1 (MQ=255) gTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGc > 2:1930140/1‑150 (MQ=255) aGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTGGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGc < 1:1972745/150‑1 (MQ=255) aGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGc < 1:1675659/150‑1 (MQ=255) ccAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGcca < 2:3190467/150‑2 (MQ=255) ccAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCt < 1:512491/150‑1 (MQ=255) cAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTg > 1:1186594/1‑150 (MQ=255) cAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTg > 2:1002659/1‑150 (MQ=255) aaCACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGa > 2:1201660/1‑150 (MQ=255) aaCACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGa < 1:1062517/150‑1 (MQ=255) acacGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAg < 2:3626053/150‑1 (MQ=255) gATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGc > 2:76911/1‑150 (MQ=255) ggTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCtt > 1:4006975/1‑150 (MQ=255) ggTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCtt > 1:3207006/1‑150 (MQ=255) ggTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCtt < 1:3657238/150‑1 (MQ=255) gTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATTCGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCttt < 2:2711953/150‑1 (MQ=255) gTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCttt > 2:3040639/1‑150 (MQ=255) gTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCttt > 2:1800390/1‑150 (MQ=255) tAATTCGAAGCGGGGTACGCTCCCCTCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTg < 2:3870282/150‑1 (MQ=255) ttCGAACCGGGCTACGCTCCCCGCTTTGAGCACAATACACAACTCATCTATTGAGCTATACGCAATGTATCAATCTTAGCTTGCAGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGAc < 2:3191628/150‑1 (MQ=255) gAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCtt > 2:64390/1‑150 (MQ=255) gAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAACCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCtt > 1:2072423/1‑150 (MQ=255) aaGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTg > 1:1428449/1‑150 (MQ=255) aaGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTg < 2:4435923/150‑1 (MQ=255) aaGCGGGGAGCGTACCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTg > 1:3787489/1‑150 (MQ=255) aGCGGGGTTCGCTCCCCGCTTTGAGCACATTTCACTACTGATCTTTTGATCTATACGCATTGTATCAATATTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTTGCTCTTTGGACGTTGc < 1:734851/150‑1 (MQ=255) aGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTGc < 1:2817699/150‑1 (MQ=255) cGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTGCCa < 2:3372497/150‑1 (MQ=255) gggTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTGCCaga < 1:307618/150‑1 (MQ=255) tACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTGCCAGAGCt < 1:896194/150‑1 (MQ=255) | GACATACGCCCCAAGGCGGCAAGCGAAATCGGCGATTTGGGTCACGCAAGCCGCCTATTGGGTCACACTGACAAGCGCATCACACAAACGGTATATAGACGAGTAGGTGAAATCGTACAGCCAACACGATAGGTAATTCGAAGCGGGGTACGCTCCCCGCTTTGAGCACAATTCACAACTGATCTATTGAGCTATACGCATTGTATCAATCTTAGCTTGCTGCTCTGCCACCCAATCATCATAGGTTTCGAGAGAATACCTCGCACGCCTGAGTAGCTCTTTGGACCTTGCCAGAGCT > NC_002947/4498485‑4498782 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |