| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,519,200 | G→T | 8.4% | intergenic (+71/+15) | infA → / ← clpA | translation initiation factor IF‑1/ATP‑dependent serine protease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,519,200 | 0 | G | T | 8.4% | 543.0 / 27.7 | 164 | intergenic (+71/+15) | infA/clpA | translation initiation factor IF‑1/ATP‑dependent serine protease |
| Reads supporting (aligned to +/- strand): ref base G (87/63); new base T (8/6); total (95/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 166 total aligned reads displayed.
TCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATCTTGTCCTG > NC_002947/4519051‑4519349 | tctcACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAg < 2:2991095/150‑1 (MQ=255) cACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCa > 2:1813106/1‑150 (MQ=255) cACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCa < 1:506832/150‑1 (MQ=255) gCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCACGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCCTTGCAGcccc < 1:3963610/150‑1 (MQ=255) cGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCCTTGCAGCCCCt < 1:1054514/150‑1 (MQ=255) cGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCCTTGCAGCCCCt < 1:1054380/150‑1 (MQ=255) cGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCCTTGCAGCCCCt < 2:4416924/150‑1 (MQ=255) aCAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGc < 1:565853/150‑1 (MQ=255) aCAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGc < 1:2153827/150‑1 (MQ=255) gTCCGTGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAATGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATc > 1:1466177/1‑150 (MQ=255) gTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATc < 1:2867171/150‑1 (MQ=255) gcgTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCAcgc < 2:90886/150‑1 (MQ=255) cgTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCC‑GGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGa > 2:1818140/1‑150 (MQ=255) gTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGa > 1:186411/1‑150 (MQ=255) tCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGAc > 2:3697274/1‑150 (MQ=255) cGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGAcc > 2:3604227/1‑150 (MQ=255) tGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGAc < 2:35406/144‑1 (MQ=255) cGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGt < 1:4509663/150‑1 (MQ=255) gCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTg < 2:2579694/150‑1 (MQ=255) gCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTg < 1:4071188/150‑1 (MQ=255) tACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGttt < 2:2073207/150‑1 (MQ=255) aCGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTc < 2:2848414/150‑1 (MQ=255) aCGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTc < 2:2981480/150‑1 (MQ=255) aCGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTc < 1:3697274/150‑1 (MQ=255) aCGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTc < 1:1416313/150‑1 (MQ=255) gACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGa > 2:3611991/1‑150 (MQ=255) aCCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGaa < 1:1402664/150‑1 (MQ=255) ccTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAg > 1:22265/1‑150 (MQ=255) cTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTGTCGAAGt > 1:4085489/1‑150 (MQ=255) cTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTATTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGt < 2:1275193/150‑1 (MQ=255) tGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTc < 2:3052597/150‑1 (MQ=255) gAGCAAGGGCCGCATCACCTACCGTGCGCGCTACGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCg < 2:3862898/150‑1 (MQ=255) gAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCg < 2:3862981/150‑1 (MQ=255) cAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCATCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAac > 2:899434/1‑150 (MQ=255) cAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAac > 2:3169934/1‑150 (MQ=255) cAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAac > 2:3425601/1‑150 (MQ=255) aaGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAaca > 2:1123663/1‑150 (MQ=255) cATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCg < 1:3187961/150‑1 (MQ=255) cATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCg < 1:2657582/150‑1 (MQ=255) aCCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCAt < 1:4012669/150‑1 (MQ=255) ccTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATc < 1:3362906/150‑1 (MQ=255) cTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGTACACCAGTTCGCCATcg > 2:4221416/1‑150 (MQ=255) cTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTGTCGAAGTCGAACACCAGTTCGCCATcg > 2:873596/1‑150 (MQ=255) tACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATcgc > 1:1565097/1‑150 (MQ=255) gcgcTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCg > 1:3715861/1‑150 (MQ=255) cTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACa < 1:302576/150‑1 (MQ=255) cTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACa > 1:1755638/1‑150 (MQ=255) tAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCa > 1:1833121/1‑77 (MQ=255) tAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCa < 2:1833121/77‑1 (MQ=255) tAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACAt > 1:671290/1‑150 (MQ=255) aGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGc > 1:3343011/1‑150 (MQ=255) aaGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCTGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGcaccac > 2:3198240/1‑150 (MQ=255) aaGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGcaccac > 1:2363864/1‑150 (MQ=255) cATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGcca > 1:1621859/1‑150 (MQ=255) cATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGcca > 1:2939527/1‑150 (MQ=255) caaaaaaGCCCGGCACCTGGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACC‑CCccacca > 2:2295466/3‑150 (MQ=255) gAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGccacca > 2:4076927/1‑150 (MQ=255) aaaGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGc > 1:3598111/1‑150 (MQ=255) aaGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCt < 2:583909/150‑1 (MQ=255) aaGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCt < 2:583867/150‑1 (MQ=255) gCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTGTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCg > 1:3113667/1‑150 (MQ=255) ccGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGc < 2:769183/150‑1 (MQ=255) ccGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGc > 2:4510653/1‑150 (MQ=255) aGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTc > 2:1434298/1‑150 (MQ=255) ccGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCaa > 2:3012451/1‑150 (MQ=255) ggCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACa > 2:4443725/1‑150 (MQ=255) ggCTTTATTGAGCCACAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACa < 2:1462813/150‑1 (MQ=255) gCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAg < 2:1914874/150‑1 (MQ=255) gCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAg < 1:4308488/150‑1 (MQ=255) tgCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCGCCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATctcctc > 1:4195561/1‑150 (MQ=255) tgCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATctcctc > 1:1927060/1‑150 (MQ=255) gCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCg > 1:758744/1‑150 (MQ=255) ccTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCgg > 1:4501214/1‑150 (MQ=255) catCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCgg > 2:1687765/3‑150 (MQ=255) cTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGc > 2:3317388/1‑150 (MQ=255) tCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGcc > 1:2083142/1‑150 (MQ=255) tCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGcc > 2:1824413/1‑150 (MQ=255) aaGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAg > 1:2904000/1‑150 (MQ=255) aaGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAg > 1:2854015/1‑150 (MQ=255) gAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCg > 1:379609/1‑150 (MQ=255) aTTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGcc > 1:443093/1‑150 (MQ=255) tGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGc < 2:2049450/150‑1 (MQ=255) tGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGc < 2:1755638/150‑1 (MQ=255) gCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGGGGCCGCt > 1:1922954/1‑150 (MQ=255) gCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCt > 1:3481963/1‑150 (MQ=255) cAGGGGCTGCCTTGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCtt > 1:543939/1‑150 (MQ=255) cAGGGGCTGCCTTGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCtt > 1:353803/1‑150 (MQ=255) cAGGGGCTGCCTTGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCtt > 1:1548850/1‑150 (MQ=255) cAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCtt > 1:3551444/1‑150 (MQ=255) cAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCtt > 2:4365928/1‑150 (MQ=255) cAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCtt > 2:2097232/1‑150 (MQ=255) acgggCTGCCTTGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGAGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCtag > 2:2157775/3‑148 (MQ=255) ggggCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGa < 1:3604227/150‑1 (MQ=255) gggCTGCCTTGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGAt > 1:245617/1‑150 (MQ=255) gggCTGCCTTGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGAt > 1:245585/1‑150 (MQ=255) ggCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATc < 1:3646738/150‑1 (MQ=255) cTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATCtt > 1:3695838/1‑150 (MQ=255) tGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCCGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCGTGCTCTTg > 1:4288341/1‑150 (MQ=255) tGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATCTTg > 2:4241427/1‑150 (MQ=255) tGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATCTTg > 2:2577672/1‑150 (MQ=255) | TCTCACTGGCGACAAGGTCCGCGTCGAACTGACGCCGTACGACCTGAGCAAGGGCCGCATCACCTACCGTGCGCGCTAAGCTCAAGCCATGAAAAAGCCCGGCCAGGTGCCGGGCTTTTTTGTGCCTCAAGAAATTGCAGGGGCTGCAAGGCAGCCCCTGCACATCACGCGACCTCAGCCGTGGTTTCGAAGTCGAACACCAGTTCGCCATCGCGCAGGTCGACATGCACCACGCCACCATGCTCGGCCAGCTCGCCAAACAGGATCTCCTCGGCCAGCGGCCGCTTGATCTTGTCCTG > NC_002947/4519051‑4519349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |