| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,613,027 | A→G | 5.1% | intergenic (+21/‑2086) | hcpC‑II → / → PP_4084 | hemolysin‑coregulated protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,613,027 | 0 | A | G | 5.1% | 616.1 / 14.5 | 198 | intergenic (+21/‑2086) | hcpC‑II/PP_4084 | hemolysin‑coregulated protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (91/95); new base G (7/3); total (100/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.30e-01 | |||||||||||
Only 100 of 200 total aligned reads displayed.
CACTCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGC > NC_002947/4612879‑4613176 | tCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGcc > 1:2995177/1‑150 (MQ=37) tCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGcc > 1:1882104/1‑150 (MQ=37) cGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCa > 2:3870392/1‑150 (MQ=37) aCAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATg < 1:3863145/150‑1 (MQ=37) aCAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATg > 1:1855312/1‑150 (MQ=37) aaGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATgccc > 2:1706937/1‑150 (MQ=37) aGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCACCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATgcccg > 1:22719/1‑150 (MQ=37) gACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATgcccgc < 1:733226/150‑1 (MQ=37) aCAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATgcccgcc > 1:2611012/1‑150 (MQ=37) tGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCGGGCATGGCCTGCCCggg < 1:439755/150‑1 (MQ=11) tGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCGGGCATGGCCTGCCCggg < 2:1731874/150‑1 (MQ=11) tGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCggg < 2:849318/150‑1 (MQ=37) tGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCggg < 1:4016248/150‑1 (MQ=37) tGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCggg > 1:3194844/1‑150 (MQ=37) tGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCggg > 1:2421912/1‑150 (MQ=37) gAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGc > 1:1209677/1‑150 (MQ=37) gAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGc > 1:3812917/1‑150 (MQ=37) gAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGc > 2:720361/1‑150 (MQ=37) aaatCTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCt > 2:1070312/1‑150 (MQ=37) aaaaCTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCt > 2:1451356/1‑150 (MQ=37) aaaaCTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCt < 1:4286412/150‑1 (MQ=37) aaaCTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCtt < 2:4436360/150‑1 (MQ=37) aCTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTtg < 2:2698670/150‑1 (MQ=37) cTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTtgt < 2:3004713/150‑1 (MQ=37) cTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCGAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAg > 1:1155523/1‑150 (MQ=21) ggTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGAc > 1:983780/1‑150 (MQ=34) ttGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGAcgg > 1:2812154/1‑150 (MQ=34) tGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGAcggc < 2:4283964/150‑1 (MQ=34) tGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGAcggc > 2:3448822/1‑150 (MQ=34) tCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAg > 1:3406065/1‑150 (MQ=34) cGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAgg < 1:2790780/150‑1 (MQ=34) tGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATc < 1:953451/150‑1 (MQ=34) tGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATc < 1:3463148/150‑1 (MQ=34) gCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCtt > 2:2754561/1‑150 (MQ=34) gCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTGTGTGTTGATTCAGACGGCGGACAAGGATCtt > 1:1750745/1‑150 (MQ=21) cGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCttt < 1:3176273/150‑1 (MQ=34) cGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGc > 1:2840158/1‑150 (MQ=34) gAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGcc > 1:772263/1‑150 (MQ=34) aaaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGcccgcccg > 1:3580192/1‑106 (MQ=35) aaaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGcccgcccg < 2:3580192/106‑1 (MQ=35) aaaGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCt < 1:3154413/150‑1 (MQ=34) gATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGc < 1:3702317/150‑1 (MQ=34) cACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCaa < 2:1887832/150‑1 (MQ=34) cGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATc < 2:4396430/150‑1 (MQ=34) gTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCt > 1:2329867/1‑150 (MQ=34) ggCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGAt < 1:4144377/150‑1 (MQ=34) ggCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCATTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGAt < 2:2665845/150‑1 (MQ=21) gCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGAtt < 1:2338979/150‑1 (MQ=34) tCACGATGTAGCCAATACCGCAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGAGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTg < 2:371356/150‑1 (MQ=21) tCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCCGGCCATGCACGCCCGGGCGGTGTGGTGATTCAGACGGCGGACCAGGATCTTGTGTGCCTAGCCAATCTGATTTg > 2:4478663/1‑150 (MQ=11) tCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTg > 2:2294275/1‑150 (MQ=34) tCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTg > 1:2730230/1‑150 (MQ=34) tCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTg > 1:2590760/1‑150 (MQ=34) aCGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgcg > 2:1179623/1‑150 (MQ=34) cGATGTAGCCACTACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAAGGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgcgc < 2:2226689/150‑1 (MQ=21) cGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTgcgc > 2:3383444/1‑150 (MQ=34) gATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCt > 2:3250061/1‑150 (MQ=34) aTGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTa < 2:1139602/150‑1 (MQ=34) tAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCACCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAg > 1:454560/1‑150 (MQ=21) aaTACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTg > 2:547407/1‑150 (MQ=34) aaTACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTg < 1:1458816/150‑1 (MQ=34) aTACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGa < 2:1738311/150‑1 (MQ=33) aTACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGa < 2:4017647/150‑1 (MQ=33) tACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGCCAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAg < 1:659820/150‑1 (MQ=17) tACCGAAGGCTCTGAAGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCAGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAg < 1:3974474/150‑1 (MQ=17) cGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATgc < 2:2636058/66‑1 (MQ=35) cGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCa > 2:1583571/1‑150 (MQ=32) cGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCa > 1:4331919/1‑150 (MQ=32) gCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGt < 1:2313264/150‑1 (MQ=32) tctGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTg < 2:3338074/150‑1 (MQ=32) tctGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTg < 2:3399549/150‑1 (MQ=32) tctGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTg < 1:16691/150‑1 (MQ=32) tctGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTg > 2:3056868/1‑150 (MQ=32) tctGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTGTGAGGCACTCGTTg > 1:1529471/1‑150 (MQ=17) tctGACGACTGGAGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGACATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTg > 1:2654745/1‑150 (MQ=17) gacTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAg < 2:1981584/150‑1 (MQ=32) acTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGc < 1:1040950/150‑1 (MQ=32) tGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCGTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAATGCTg > 2:4233453/1‑150 (MQ=17) gcgcgcACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGaa < 2:2868622/150‑1 (MQ=33) gcACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCg < 2:1783880/150‑1 (MQ=34) ccgccTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAgtggt < 1:4075186/150‑1 (MQ=34) cTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCg > 2:3918537/1‑150 (MQ=34) gACCCGTGCAAATGCCCCGGGCAGGCCATGCCCACCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATTCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGtt < 1:1706937/150‑1 (MQ=21) aCCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTc < 1:3262293/150‑1 (MQ=34) cGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGaa < 2:729753/150‑1 (MQ=32) cGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGaa < 1:2501126/150‑1 (MQ=32) cGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGaa < 2:419449/150‑1 (MQ=32) tGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACt > 2:4449025/1‑150 (MQ=32) gCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTc > 1:238387/1‑150 (MQ=32) cAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTcc < 2:4142536/150‑1 (MQ=32) cAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTcc < 1:3455770/150‑1 (MQ=32) acaaagcccGGGCGGGCATGGCCTGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCcg > 2:648843/7‑150 (MQ=11) caaagcccGGGCGGGCATGGCCTGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCcgc > 1:1099238/6‑150 (MQ=11) gCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAg < 1:435609/150‑1 (MQ=32) agcccGGGCGGGCATGGCCTGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAg > 1:1996267/3‑150 (MQ=11) gcccGGGCGGGCATGGCCTGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAgg > 2:1468576/2‑150 (MQ=11) cccGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAggg > 2:2843051/1‑150 (MQ=32) cccGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAggg > 1:743058/1‑150 (MQ=32) ccGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGc > 2:319228/1‑150 (MQ=32) aGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAgc < 2:3825996/150‑1 (MQ=32) | CACTCGACAAAGACAATGAAAACTACACCCAGCTGGTTGAAGTATCGCTGGCGTATCGAAAGATCACGTGGGCTCACGATGTAGCCAATACCGAAGGCTCTGACGACTGGCGCGCACCCGCCGCCTGACCCGTGCAAATGCCCCGGGCAGGCCATGCCCGCCCGGGCTTTGTGTTGATTCAGACGGCGGACAAGGATCTTTTATGCCTAGCCAATCTGATTTGCGCTACAGCTTTGAGGCACTCGTTGGCAAAGCTGAATTCGAAGTGGTGTCGTTCGAACTCCGCGAGGGCATCAGC > NC_002947/4612879‑4613176 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |