| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 372,650 | A→T | 6.1% | intergenic (+67/‑112) | dgcA → / → dgcB | dimethylglycine dehydrogenase subunit/dimethylglycine dehydrogenase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 372,650 | 0 | A | T | 6.1% | 789.1 / 28.2 | 228 | intergenic (+67/‑112) | dgcA/dgcB | dimethylglycine dehydrogenase subunit/dimethylglycine dehydrogenase subunit |
| Reads supporting (aligned to +/- strand): ref base A (89/125); new base T (7/7); total (96/132) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 | |||||||||||
Only 100 of 229 total aligned reads displayed.
GTACCGCATCGGCGACTGCGTGGCCCAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCTTCTACCCATCCTGCTGTTCGCTGC > NC_002947/372502‑372799 | gTACCGCATCGGCGACTGCGTGGCCCAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCAc < 2:1809890/150‑1 (MQ=255) ccGCATCGGCGACTGCGTGGCCCAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGa < 2:4250758/150‑1 (MQ=255) tCGGCGACTGCGTGGCCCAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGacaaca < 2:663192/150‑1 (MQ=255) gCGACTGCGTGGCCCAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTg > 1:2631103/1‑150 (MQ=255) gCGACTGCGTGGCCCAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTg > 1:821940/1‑150 (MQ=255) gACTGCGTGGCCCAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGtt < 2:1097595/150‑1 (MQ=255) cTGCGTGGCCCAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGGTCAGGCAACAGTGTTgt < 2:3119308/150‑2 (MQ=39) tGCGTGGCCCAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGcc < 2:3003267/150‑1 (MQ=255) tGCGTGGCCCAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGcc < 2:3100216/150‑1 (MQ=255) gCGTGGCCCAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCt < 1:1538908/150‑1 (MQ=255) gTGGCCCAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGa > 2:3273334/1‑150 (MQ=255) ggCCCAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGAcc < 2:4213552/150‑1 (MQ=255) ccAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGa < 1:4132089/150‑1 (MQ=255) ccAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGa > 2:524522/1‑150 (MQ=255) ccAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGa < 1:372443/150‑1 (MQ=255) cAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGAc > 2:3731835/1‑150 (MQ=255) cAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGAc < 2:882734/150‑1 (MQ=255) cAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGAc < 2:962469/150‑1 (MQ=255) cAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCAtt < 1:1663651/150‑1 (MQ=255) aaCGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTc > 2:3426426/1‑150 (MQ=255) tGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCCGGTCAGGCAACAGTGTTGTCAGTGCTGACGCATTCGCgg < 1:4470320/150‑1 (MQ=21) tGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCgg < 1:3615566/150‑1 (MQ=255) tGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCgg < 1:1571340/150‑1 (MQ=255) tGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCgg < 2:4486233/150‑1 (MQ=255) tGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCgg < 1:2279544/150‑1 (MQ=255) tGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACGTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGTATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCgg < 2:4166504/150‑1 (MQ=255) cgATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACGACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCg < 2:1333727/150‑1 (MQ=255) tACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATGGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCtt < 1:2148175/150‑1 (MQ=255) tACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTTCACCCGcgaat < 2:2621251/150‑5 (MQ=255) cgacgCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTAc > 1:4316755/1‑150 (MQ=255) cgacgCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTAc < 1:3542629/150‑1 (MQ=255) gacgCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACa < 2:4522941/150‑1 (MQ=255) ccTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATggg < 1:4041496/150‑1 (MQ=255) cTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATgggg > 2:2416606/1‑150 (MQ=255) cTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATgggg < 1:1599567/150‑1 (MQ=255) ttGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGc < 2:3998445/150‑1 (MQ=255) gcgcCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCa < 1:1821359/150‑1 (MQ=255) cgcCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAg < 1:3504225/150‑1 (MQ=255) cgcCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAg < 1:1249077/150‑1 (MQ=255) cTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGtct < 2:2118208/150‑1 (MQ=255) cTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGtct > 1:1127264/1‑150 (MQ=255) cTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGtct > 2:303673/1‑150 (MQ=255) cTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACGGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACCTGGGGCCAGtct > 2:3407740/1‑150 (MQ=255) gCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGcc < 1:4408217/150‑1 (MQ=255) gCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGcc < 2:2238958/150‑1 (MQ=255) cAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGccc > 1:2014828/1‑150 (MQ=255) cAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACAGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGccc > 1:2936670/1‑150 (MQ=255) aGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCctc > 2:2554596/1‑150 (MQ=255) ggACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCctct > 2:4351089/1‑150 (MQ=255) ggACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCctct > 2:2715091/1‑150 (MQ=255) ggACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCctct < 1:918795/150‑1 (MQ=255) gACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTg < 2:1436444/150‑1 (MQ=255) aCTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTgg < 1:4227008/150‑1 (MQ=255) cTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGt < 2:3943058/150‑1 (MQ=255) cTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGt < 1:131636/150‑1 (MQ=255) ttCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTc > 1:3559408/1‑150 (MQ=255) ttCGGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTc > 1:464215/1‑150 (MQ=255) tCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGt < 2:2880617/148‑1 (MQ=255) tCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGt > 1:2880617/1‑148 (MQ=255) tGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGgc > 1:1937165/1‑150 (MQ=255) tGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACGGTTGCCTGACCGGACGCATTCGCGGGTGACCCCGCTCTTACATGGGGCCCGTCTCGCCCTCGGGTCGgc > 2:1862641/1‑150 (MQ=255) gATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCGGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGgcg > 1:1875197/1‑150 (MQ=255) cGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCaa < 2:2485286/150‑1 (MQ=255) cGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCaa < 1:2643000/150‑1 (MQ=255) aaCAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAAt > 2:3608322/1‑150 (MQ=255) aGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCa < 1:3215557/150‑1 (MQ=255) cATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTtgt < 2:1750260/150‑1 (MQ=255) cATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTtgt < 1:617862/150‑1 (MQ=255) cATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTAGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTtgt > 1:541071/1‑150 (MQ=255) aTCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTtgtg < 1:3760162/150‑1 (MQ=255) aTCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTtgtg > 1:975547/1‑150 (MQ=255) tCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTgg < 2:3791469/150‑1 (MQ=255) gggCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGAATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGa < 2:1515722/150‑1 (MQ=255) gcgcGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGc > 2:4010819/1‑150 (MQ=255) gcgcGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCAGTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCGGTTTGTGGGAGc > 1:3862118/1‑150 (MQ=255) aTCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTccc > 2:2611572/1‑150 (MQ=255) aTCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTccc > 1:3914453/1‑150 (MQ=255) tCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTGTGTGGGAGCCTCCCa > 2:3864852/1‑150 (MQ=255) ccTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATg > 1:4454397/1‑150 (MQ=255) tGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGtt < 1:1679449/150‑1 (MQ=255) gTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTg < 2:3013743/150‑1 (MQ=255) gAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAaca > 2:2786501/1‑150 (MQ=255) aGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAacac > 2:1587640/1‑150 (MQ=255) ggTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCtt > 2:2808325/1‑150 (MQ=255) ggTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCtt > 1:2784825/1‑150 (MQ=255) ggTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCtt > 2:3122355/1‑150 (MQ=255) cccGCGAATGCGTCCGGTCAGGCAACAGTGTTGTCAGTGCTGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGGTTGTGGGAGCCTCCCATGTTGAACACCCTTCTAccc > 1:2424121/1‑150 (MQ=21) cccGCGAATGCGTCCGGTCAGGCAACAGTGTTGTCAGTGCTGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTATGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCTACTAccc > 1:2424069/1‑150 (MQ=21) cccGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGTATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCTTCTAccc > 1:971060/1‑150 (MQ=255) ccGCGAATGCGTCCGGTCAGGCAACAGTGTTGTCAGTGCTGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCTTCTACCCa > 1:3068232/1‑150 (MQ=21) ccGCGAATGCGTCCGGTCAGGCAACAGTGTTGTCAGTGCTGACGCATTCGCGGGTAAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCTTCTACCCa > 2:4045365/1‑150 (MQ=21) ccGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCTTCTACCCa > 1:3317602/1‑150 (MQ=255) ccGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCTTCTACCCa > 2:2068054/1‑150 (MQ=255) ccGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCTTCTACCCa > 1:1062026/1‑150 (MQ=255) ccGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTGGTGGGAGCCTCCCATGTTGAACACCCTTCTACCCa > 2:2188629/1‑150 (MQ=255) gcgAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCTTCTACCCATc > 1:320557/1‑150 (MQ=255) gTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCTTCTACCCATCCTGCTGtt < 1:3731835/150‑1 (MQ=255) gCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCTTCTACCCATCCTGCTGTTCGCt > 1:1744684/1‑150 (MQ=255) ccACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCTTCTACCCATCCTGCTGTTCGCt < 2:2338538/149‑1 (MQ=255) aCTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCTTCTACCCATCCTGCTGTTCGCTGc > 1:3102744/1‑150 (MQ=255) | GTACCGCATCGGCGACTGCGTGGCCCAGCGCAACGTGCATGCGGCGATCTACGACGCCTTGCGCCTGTGCAAGGACTTCTGATCGTTAACAGTCGCCGCCATCGGGCGCGATCCCTGTAGGAGCGGGTTTACCCGCGAATGCGTCAGCACTGACAACACTGTTGCCTGACCGGACGCATTCGCGGGTGAACCCGCTCTTACATGGGGCCAGTCTCGCCCTCTGGTCGGCGCAAGAATCCAGCTGTTTGTGGGAGCCTCCCATGTTGAACACCCTTCTACCCATCCTGCTGTTCGCTGC > NC_002947/372502‑372799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |