| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,844,791 | T→G | 5.2% | S316A (TCG→GCG) | ccoP‑II → | cbb3‑type cytochrome c oxidase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,844,791 | 0 | T | G | 5.2% | 510.5 / 14.8 | 153 | S316A (TCG→GCG) | ccoP‑II | cbb3‑type cytochrome c oxidase subunit |
| Reads supporting (aligned to +/- strand): ref base T (32/113); new base G (2/6); total (34/119) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.71e-01 | |||||||||||
Only 100 of 153 total aligned reads displayed.
GACCCACCCGCAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTG > NC_002947/4844643‑4844938 | gACCCACCCGCAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTc < 2:3195342/150‑1 (MQ=255)gACCCACCCGCAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTc < 1:1816542/150‑1 (MQ=255) ccacccGCAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCACCGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCa > 1:2021168/1‑150 (MQ=255) acccGCAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCAcc < 2:2927775/150‑1 (MQ=255) acccGCAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCAcc > 1:4222639/1‑150 (MQ=255) cGCAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAgg < 1:2643358/150‑1 (MQ=255) cGCAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAgg < 1:3375918/150‑1 (MQ=255) cAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGGTGCGACAGGCt < 1:3458473/150‑1 (MQ=255) ggCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGa < 1:2961821/150‑1 (MQ=255) gCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGGTGCGACAGGCTgta < 1:1502727/150‑3 (MQ=255) cGTTCATCTACGGCTCGAGCTTTGCCCTGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGGTGCGACAGGCTgtag < 1:1636353/150‑4 (MQ=21) gTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGcc > 2:3325576/1‑150 (MQ=255) ttCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCg > 1:4369071/1‑150 (MQ=255) tCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCgg < 2:758541/150‑1 (MQ=255) cATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGc < 1:1755432/150‑1 (MQ=255) cTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCaa < 2:973222/150‑1 (MQ=255) tACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAg < 1:785376/150‑1 (MQ=255) tACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAg < 2:283858/150‑1 (MQ=255) ggCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCt < 1:1215201/150‑1 (MQ=255) cTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGa < 1:3914521/150‑1 (MQ=255) cTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGa < 2:4308895/150‑1 (MQ=255) cTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATCGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGa < 2:2217197/150‑1 (MQ=255) cTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATCGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGa < 2:2217159/150‑1 (MQ=255) tCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACATGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAg > 2:902225/1‑150 (MQ=255) gCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAag < 2:3718378/150‑1 (MQ=255) ttGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAaggca < 2:778735/150‑1 (MQ=255) cccAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAaggcaggc > 1:2729199/1‑150 (MQ=255) cccAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAaggcaggc < 2:1579005/150‑1 (MQ=255) ccAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcc > 2:3266645/1‑150 (MQ=255) aGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcctg < 1:4432515/150‑1 (MQ=255) aGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcctg < 1:3699459/150‑1 (MQ=255) aGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcctg < 1:3301272/150‑1 (MQ=255) gTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcctgg < 1:2805389/150‑1 (MQ=255) ttGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcctggc < 2:4179729/150‑1 (MQ=255) gcagcaGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAggcctggcct < 2:3107777/150‑1 (MQ=255) cagACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTc < 1:1251899/150‑1 (MQ=255) cagACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTc < 2:718021/150‑1 (MQ=255) cagACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTc > 2:692983/1‑150 (MQ=255) agACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTcg > 2:4083479/1‑150 (MQ=255) gACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTcgc < 1:2042359/150‑1 (MQ=255) gACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTcgc < 1:1425817/150‑1 (MQ=255) gACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTcgc < 2:3313379/150‑1 (MQ=255) ccATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCgg < 1:2287350/150‑1 (MQ=255) ccATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCgg < 1:2441734/150‑1 (MQ=255) ccATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCgg < 1:1384576/150‑1 (MQ=255) ccATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCgg < 1:1275312/150‑1 (MQ=255) ccATTCGGTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCgg < 2:1021776/150‑1 (MQ=255) cATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCggg > 1:1533179/1‑150 (MQ=255) ttCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTa > 2:1702838/1‑150 (MQ=255) ttCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTa > 2:3767341/1‑150 (MQ=255) gTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑c < 1:938504/150‑1 (MQ=255) gTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑c < 1:4072142/150‑1 (MQ=255) tGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGc < 1:1147539/150‑1 (MQ=255) ggCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCt < 2:540276/150‑1 (MQ=255) ccgccAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTTTA‑CCCGcgaa < 1:3461898/150‑4 (MQ=255) cgccAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCt > 2:2764445/1‑150 (MQ=255) gccAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTa < 2:3183280/150‑1 (MQ=255) aGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTacac > 2:4503916/1‑150 (MQ=255) ggggCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTAcaca < 1:966863/150‑1 (MQ=255) ggggCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTAcaca < 1:2986992/150‑1 (MQ=255) tGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCt‑t < 2:3666037/150‑1 (MQ=255) tGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCt‑t < 2:3130815/150‑1 (MQ=255) tGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCt‑t < 1:1580252/150‑1 (MQ=255) tGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCtgt < 1:2938977/150‑3 (MQ=255) cgCCCAGGAACAACTGCAGGGCAACGACCAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTACGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAg < 2:1338211/149‑1 (MQ=38) gCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAgg < 2:4396635/150‑1 (MQ=255) cccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGGa < 2:2602730/150‑1 (MQ=255) cccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGGa < 1:31292/150‑1 (MQ=255) cccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGGa < 1:230378/150‑1 (MQ=255) ccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAg < 1:1550523/150‑1 (MQ=255) ccAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGGAg < 1:1755031/150‑1 (MQ=255) cAGGAACAACTGCAGGGCATCGACACGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGTAGc < 2:3009011/150‑1 (MQ=38) cAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGGAGc < 1:2604673/150‑1 (MQ=255) ggAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCgg < 1:367324/150‑1 (MQ=255) ggAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCgg < 2:3314095/150‑1 (MQ=255) ggAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGGAGCgg < 1:3813021/150‑1 (MQ=255) ggAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGGAGCgg < 2:4057239/150‑1 (MQ=255) ggAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACA‑AGGATCCTGTGTAGGAGCgg < 1:4056858/150‑1 (MQ=255) ggAACAACTGCAGGGCAACGACAAGGTGCACGTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCgg < 1:3332764/150‑1 (MQ=255) gAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCggg < 1:1470720/150‑1 (MQ=255) gAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCggg < 1:1098867/150‑1 (MQ=255) gAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCggg < 1:1098773/150‑1 (MQ=255) gAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCggg < 1:591126/150‑1 (MQ=255) aacaacTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGt < 2:3056698/150‑1 (MQ=255) aacTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTa > 2:3719418/1‑150 (MQ=255) aacTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCG‑GGTAGGAGCGGGTTTa > 2:3719461/1‑150 (MQ=255) acTGCAGGGCAACGACAAGGTGCACTTGTTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTAc < 1:3777421/150‑1 (MQ=255) acTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTAc < 1:305213/150‑1 (MQ=255) tGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTAccc > 2:1864677/1‑150 (MQ=255) cAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGTGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCcgc < 1:2455747/150‑1 (MQ=255) ccccggTGCACTGGCGGGCGGCTTACGTCACCAGCCTGTCGCCCCCGGCTGCGCCGGCCACGGCGGCGTACGGCCGGCGGGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCCCGGATCCT‑TGTAGGAGGGGGTTTACCCGCGAAGAGGCCg < 2:3167728/146‑1 (MQ=18) cTTGGTGGCGGCTTACGTCTACCGCCTGTCGCACCTGGCTGCGCCGGCCAAGGGTGAGTACGGCTGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACCGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGcac < 2:3937669/150‑1 (MQ=25) cTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACCGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCa > 2:675550/1‑150 (MQ=255) gcggcTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCACCTACACACGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTAATGGGCCCGCAttt > 1:2867593/1‑150 (MQ=37) ggcTTACTTCTACAGCCTGTCGCACCAGGCTGCGCCGGCCACGGCTGCGTACGGCAGGCCTGGCCTCTTCGCGGTTAAA‑CCCGCTCCTCCCCCGGATCCT‑TGTAGGAGCGGTTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTtct < 2:3504484/150‑1 (MQ=37) tACGTCTACCGCCTGTCGCACCCGGCTGAGCCGGCCACGGCTTATTAAGGCCGGCCTGGCCTCTTCGGGGTTAAA‑CCCGCTCCTACACAGGATCCT‑GGTCGGAGGGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCa < 2:1653988/150‑1 (MQ=37) gTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCCAGGATCCG‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGc > 2:1370749/1‑150 (MQ=255) cTACCGCCTGTCGCACCAGGCGGCGCGGCCCTCGGCTGATTATGGCAGGCCGGGCCTCTACG‑GGGTAAACCCCGCTCCTACCCCGCATCCT‑GGTTGGTGCGGGTTAACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCaa < 2:2021168/150‑1 (MQ=255) aGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCGACACAGGATCCG‑TGTGGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGGACAGCATTTCTCGCAGGCAAGTGa > 2:2045028/1‑150 (MQ=255) tGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACCCAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGCCCTg > 2:2641226/1‑150 (MQ=255) | GACCCACCCGCAGGCGTTCATCTACGGCTCGAGCTTTGCCCAGTTGCAGCAGACCATTCGTTATGGCCGCCAGGGGCAGATGCCGGCCCAGGAACAACTGCAGGGCAACGACAAGGTGCACTTGCTGGCGGCTTACGTCTACAGCCTGTCGCACCAGGCTGAGCCGGCCAAGGCTGAGTAAGGCAGGCCTGGCCTCTTCGCGGGTAAA‑CCCGCTCCTACACAGGATCCT‑TGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGGCACAGCATTTCTCGCAGGCAAGTGACCTG > NC_002947/4844643‑4844938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |