| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,080,847 | G→C | 5.3% | intergenic (‑122/+275) | mgtE ← / ← PP_t56 | magnesium transporter/tRNA‑Arg |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,080,847 | 0 | G | C | 5.3% | 835.0 / 24.8 | 242 | intergenic (‑122/+275) | mgtE/PP_t56 | magnesium transporter/tRNA‑Arg |
| Reads supporting (aligned to +/- strand): ref base G (117/112); new base C (8/5); total (125/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 252 total aligned reads displayed.
GCGCTTTTTTAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTT > NC_002947/5080698‑5080996 | tttttAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCgggg < 1:3374836/150‑1 (MQ=255) tttttAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCgggg < 1:2844276/150‑1 (MQ=255) tttttAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCgggg < 2:2552925/150‑1 (MQ=255) ttttAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGc > 1:1070764/1‑150 (MQ=255) ttttAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGc > 1:717223/1‑150 (MQ=255) ttttAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGc > 2:3667098/1‑150 (MQ=255) aCTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGCCGGGGCttgtg < 2:400226/150‑5 (MQ=255) cTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCGCAAGCCCCGCCGGGGCttgtgg < 2:2794412/150‑6 (MQ=255) cTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGCCGGGGCttgtgg < 1:3165293/150‑6 (MQ=255) ttCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACggg > 2:2877736/1‑150 (MQ=255) cTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGgcg > 1:3922627/1‑150 (MQ=255) ttCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAAt > 1:4193612/1‑150 (MQ=255) tCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATc < 2:2415320/150‑1 (MQ=255) tCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATac > 1:2507209/1‑150 (MQ=255) cATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATaca < 1:1433320/150‑1 (MQ=255) aTAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATacac > 1:649892/1‑150 (MQ=255) tAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACt < 1:1560685/150‑1 (MQ=255) atgCGAACTCCACTACCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACGGGGTAAGTCCATGGTGGTTTTCCACAACCCCCGGCGGGGCTGACGGGCGCAATCATACACTg > 2:2758051/3‑150 (MQ=255) aGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTg > 1:3990370/1‑150 (MQ=255) ggCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGc > 1:3117059/1‑150 (MQ=255) gCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCt > 2:3796223/1‑150 (MQ=255) gCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCt > 2:878744/1‑150 (MQ=255) cGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTa > 2:2705962/1‑150 (MQ=255) gAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTaa > 2:1032741/1‑150 (MQ=255) aaCTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTaaa < 1:4117502/150‑1 (MQ=255) tccactccCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCt > 1:1549484/1‑150 (MQ=255) tccactccCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCt > 2:1363666/1‑150 (MQ=255) cactccCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCATTGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGt < 1:2222384/150‑1 (MQ=255) cactccCAGCAGCGGAGCACGCCGAGGGAATCAATCGCTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGt < 2:3533987/150‑1 (MQ=255) tccCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAg > 1:2908049/1‑150 (MQ=255) ccAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGAt > 1:2174103/1‑150 (MQ=255) cagcagCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATc > 2:4238133/1‑150 (MQ=255) gcGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGATGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTa < 1:921816/150‑1 (MQ=255) gcGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGATGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTa < 1:3185880/150‑1 (MQ=255) cGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTaa < 2:3390781/150‑1 (MQ=255) aGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAAtt > 2:458848/1‑150 (MQ=255) cACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAAtttt > 2:1802743/1‑150 (MQ=255) ccGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAAGCGTGTTAGCGAGTAACTCCTGGGTAAGGCCATGGGGGTGGTCCACAAGCCCCGGCGGGGCTGACGGGCGCCAGCATACACTGCTAAAGCTGTCAGAGCGCTTCAAtggtt > 2:3976015/2‑146 (MQ=255) aCGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAAttttt < 1:2273909/150‑1 (MQ=255) aCGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAAttttt < 2:3566928/150‑1 (MQ=255) gCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTgg < 2:744282/150‑1 (MQ=255) aGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAg > 1:690403/1‑150 (MQ=255) caatcGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATc < 1:163116/150‑1 (MQ=255) aatcGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCg > 2:141729/1‑150 (MQ=255) aatcGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTGTGGCCAGAACAATCg > 2:1276728/1‑150 (MQ=255) tcGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGtt < 1:304821/150‑1 (MQ=255) cGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGttt < 1:482279/150‑1 (MQ=255) gTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTgc > 2:553611/1‑150 (MQ=255) tCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTgcg > 1:1957920/1‑150 (MQ=255) cAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTgcgc < 1:3740480/150‑1 (MQ=255) aGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGcgcg > 1:806528/1‑150 (MQ=255) gATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGa > 1:1362708/1‑150 (MQ=255) aTCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGAt > 1:2048422/1‑150 (MQ=255) cTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCt > 1:1846165/1‑150 (MQ=255) cTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCt < 1:2457952/150‑1 (MQ=255) cTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCt > 2:4369579/1‑150 (MQ=255) tGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTg > 2:3267236/1‑150 (MQ=255) gTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTgg < 2:412763/150‑1 (MQ=255) tATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTggg < 2:2133608/150‑1 (MQ=255) tATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTggg > 1:988904/1‑150 (MQ=255) tGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGAc > 2:43370/1‑150 (MQ=255) gAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACa > 2:1527195/1‑150 (MQ=255) tCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAAcg > 1:4501377/1‑150 (MQ=255) tCGTGTTAGCGAGTAACTACTAGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAAcg > 1:1178102/1‑150 (MQ=255) gtTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTg < 2:3218048/150‑1 (MQ=255) gtTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTg < 2:4487297/150‑1 (MQ=255) ttAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATc < 2:1643347/119‑1 (MQ=255) ttAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATc > 1:1643347/1‑119 (MQ=255) tAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGaa < 1:4466294/150‑1 (MQ=255) cGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCt > 2:2454344/1‑150 (MQ=255) cGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCt < 1:1010661/150‑1 (MQ=255) gAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTa < 2:2629580/150‑1 (MQ=255) gAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTa > 2:1196561/1‑150 (MQ=255) ctactGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTg < 2:113343/150‑1 (MQ=255) tactGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGc > 1:1202452/1‑150 (MQ=255) tactGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGc > 1:3917051/1‑150 (MQ=255) ggTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGcgacga > 1:2761703/1‑150 (MQ=255) tAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGAtt > 2:3623237/1‑150 (MQ=255) tAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGAtt < 1:2608986/150‑1 (MQ=255) gTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGAttgtt < 1:3640706/150‑1 (MQ=255) tCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGAttgttg > 2:3747680/1‑150 (MQ=255) ccATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATtgttgt < 1:437613/150‑1 (MQ=255) gtggtTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGTGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATg < 1:4129809/150‑1 (MQ=255) gtggtTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATACAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATg < 2:3767750/150‑1 (MQ=255) tggtTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATgg < 1:2677075/150‑1 (MQ=255) gtTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGa < 1:4346277/150‑1 (MQ=255) gtTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGa > 1:1444055/1‑150 (MQ=255) ttttCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGaa > 2:1479022/1‑150 (MQ=255) tttCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGaaa < 2:3287261/150‑1 (MQ=255) gcccgtcaGCCCCGCCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAg > 2:4177281/8‑150 (MQ=255) cgtcaGCCCCGCCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGcac > 2:3813129/5‑150 (MQ=255) cacaAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGcac > 2:98771/1‑150 (MQ=255) cacaAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGcac > 1:3672026/1‑150 (MQ=255) cacaAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGcac < 1:2377436/150‑1 (MQ=255) gtcaGCCCCGCCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGcaca > 2:2286316/4‑150 (MQ=255) aaGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACAtt > 2:2894996/1‑150 (MQ=255) ccGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGAtt > 1:3515977/1‑150 (MQ=255) cggcggGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGAttt < 1:1394585/150‑1 (MQ=255) cggcggGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGAttt < 2:3418245/150‑1 (MQ=255) gcggGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGAttttt < 2:2347646/150‑1 (MQ=255) | GCGCTTTTTTAACTTCTACTTCGGTCATAGGCGAACTCCACTCCCAGCAGCGGAGCACGCCGAGGGAATCAATCGGTCAGATCTTTCTGTATGAATCGTGTTAGCGAGTAACTACTGGGTAAGTCCATGGTGGTTTTCCACAAGCCCCGGCGGGGCTGACGGGCGCAATCATACACTGCTAAAGCTGTCAGATCGCTTAAATTTTTGGCCAGAACAATCGTTTGCGCGATAAAGCTGGGACAACGCGTGAAGCTATCAGTGCGACGATTGTTGTGGATGGGAAAGCACATTTGATTTTT > NC_002947/5080698‑5080996 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |