Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,544,5310CA40.0% 248.7 / inf 277intergenic (+48/+66)mdfA/ampGmultidrug MFS transporter/muropeptide permease AmpG
Reads supporting (aligned to +/- strand):  ref base C (59/106);  new base A (50/60);  total (109/168)
Fisher's exact test for biased strand distribution p-value = 1.31e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.33e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 300 total aligned reads displayed.

CTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCGATCAGGA  >  NC_002947/1544382‑1544679
                                                                                                                                                      |                                                                                                                                                    
ctgcATTTTGCCCGGGGGGGGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑Tacac                                                                                                                                                      <  1:1255268/150‑1 (MQ=255)
 tgcATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TAcaca                                                                                                                                                     >  2:6993829/1‑150 (MQ=255)
 tgcATTTTGCCCTGGCGGCGGGGGGGGCGGGGGCGTGGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TAcaca                                                                                                                                                     <  2:1272119/150‑1 (MQ=255)
 tgatttttGCCCTGGCGGGGGGGGTGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TAcaca                                                                                                                                                     <  1:7704549/146‑1 (MQ=255)
 tgaaTTTTGCCGTGGGGGGGGGGGGGGGGGGGTAGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TAcaca                                                                                                                                                     <  1:6222699/147‑1 (MQ=38)
   cATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCGCATCGCGGGTAAACCCCCACC‑AAcacacg                                                                                                                                                   >  2:7966134/1‑148 (MQ=255)
        ggCCGTGGGGGGGGGGGGGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGGGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGgccgc                                                                                                                                              <  1:7358014/149‑1 (MQ=39)
          cccTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGgccgcgc                                                                                                                                            >  2:8338473/1‑150 (MQ=255)
              ggcgggGGGGGGGGCGGGGGCGTTGGCGCTGGGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCggcgcggccct                                                                                                                                        <  2:104350/150‑6 (MQ=37)
              ggcggcGGGGGTGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCt                                                                                                                                        <  1:6710871/150‑1 (MQ=255)
                cggcggGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGTTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTAGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCttt                                                                                                                                      <  1:1019502/150‑1 (MQ=255)
                  ggggggggggCGGGGGCGTTGGCGCTGGGGCCGCTGTGGTTGGTGGGGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGt                                                                                                                                    <  2:4607426/148‑1 (MQ=255)
                  gggggggTGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTgtgt                                                                                                                                    <  2:7059897/148‑1 (MQ=37)
                  gcggGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGTTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTgtgt                                                                                                                                    <  1:6794283/150‑1 (MQ=25)
                  gcggGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGACGGCCTGGGGAAGGGGCTGTCGCTCGATAATCGGTATTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTgtgt                                                                                                                                    <  2:4916032/150‑1 (MQ=21)
                   gggggggggCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTa                                                                                                                                   <  2:1182136/149‑1 (MQ=37)
                   gggggggggCGGGGGCGTGGGCGCTGTGGCCGCTGTGGTTTGTGGGGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTa                                                                                                                                   <  2:6610003/149‑1 (MQ=25)
                   ggggggTGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTa                                                                                                                                   <  2:3990849/149‑1 (MQ=255)
                   ggggggTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTa                                                                                                                                   <  2:5434451/149‑1 (MQ=255)
                   ggggggTGGCGGGGGCGTTGGCGCGGTGGCCGCTGTGGTTTGGGGGGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTa                                                                                                                                   <  1:4591500/149‑1 (MQ=255)
                   cggGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGGGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTa                                                                                                                                   <  2:4957969/150‑1 (MQ=37)
                    gggggTGGCGGGGGGGTTGGCGCTGTGGCCGCTGTGGTTGGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAg                                                                                                                                  <  1:7069251/150‑1 (MQ=255)
                     ggggTGGGGGGGGGGTTGGCGCTGTGGCCGCTTTGGTTTGTGTTGGTTGGGGGGCCTGGGTAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAgg                                                                                                                                 <  1:1435498/150‑1 (MQ=21)
                     ggggTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAgg                                                                                                                                 <  2:626663/150‑1 (MQ=255)
                      ggggggCGGGGGCGTTGGCGCTGTGGCCGCGGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGa                                                                                                                                <  2:2318512/150‑1 (MQ=255)
                      gggTGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCTGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGa                                                                                                                                <  2:2712572/150‑1 (MQ=25)
                      gggTGGGGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGa                                                                                                                                <  1:5467815/150‑1 (MQ=37)
                      gggTGGGGGGGGCGTGGGCGCTGTGGCGGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGa                                                                                                                                <  1:378577/150‑1 (MQ=255)
                      gggTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGa                                                                                                                                <  2:2889170/150‑1 (MQ=255)
                        gTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGGTGGTGGTGGGTGGGCGGCCGGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTCCACCCGCGCC‑AACACAGGGCCCCCCCGCGGTggaggacc                                                                                                                              >  2:2055667/1‑148 (MQ=255)
                          ggggggggCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCTGTGCTGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCgg                                                                                                                            <  1:2108167/147‑1 (MQ=21)
                          ggggggggCGTGGGCGCTGTGGCCGCGGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCgg                                                                                                                            <  2:4307101/147‑1 (MQ=25)
                          ggCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCgg                                                                                                                            <  2:7638880/150‑1 (MQ=255)
                          ggCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCgg                                                                                                                            <  1:2781282/150‑1 (MQ=37)
                          ggCGGGGGCGGTGGCGCTGGGGCCGCTGTGGTTTGTGGTGGGTGGGGGGCCTGGGGAAGGGGCTGTAGCTCGATACTCGGTATTGCCGGGGCTGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCgg                                                                                                                            <  2:7555776/150‑1 (MQ=21)
                           gggggggCGTGGGCGCTGTGGCCGCTGGGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCggg                                                                                                                           <  1:3355411/148‑1 (MQ=255)
                           gCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCggg                                                                                                                           <  1:2918336/150‑1 (MQ=37)
                           gCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCggg                                                                                                                           <  2:1522846/150‑1 (MQ=37)
                           gCGGGGGCGTTGGCGCTGTGGCCGCTGGGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCggg                                                                                                                           <  2:2457360/150‑1 (MQ=255)
                            cGGGGGCGTGGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGt                                                                                                                          <  1:5887178/150‑1 (MQ=25)
                                 gCGTTGGCGCTGTGGCCGCTGGGGTTGGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTAcc                                                                                                                     <  1:6593851/150‑1 (MQ=255)
                                    tgggCGGTGTGGCCGGTGTGGTTTGGGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCcgc                                                                                                                  <  1:3201316/148‑1 (MQ=21)
                                                              ggggggtgggCGGCCTGGGGAAGGGGCTGTAGCTCGATAAGCGGAATGGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGTGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACaaa                                                                                        <  2:3258539/147‑1 (MQ=37)
                                                                       gcggcCTGGGGACGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCACC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAggg                                                                               <  2:6673753/150‑1 (MQ=255)
                                                                              ggggATGGGGCTGTCGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTGCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCa                                                                        <  2:1357116/150‑1 (MQ=255)
                                                                              ggggAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGGGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCa                                                                        <  1:7000136/150‑1 (MQ=255)
                                                                                         tGTAGCTCTATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACTGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTg                                                             <  2:5255229/150‑1 (MQ=255)
                                                                                               tctaTAATGGTTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACCGGGCCGCGCGGCTTTGTAGGCGCGGTTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGgtcgtc                                                       <  2:3090288/147‑1 (MQ=37)
                                                                                                 gATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAAACCCCTCC‑AACACAGGGCCCCGCCGCGTTGTTGGGTCGGGGTTTACCGCGAAGAGGCCCCCACAGGCAAAAAAAAACGTCAGGGCCGCGCAGCCACCGAGTGGTGGTCCg                                                     >  2:3329150/1‑150 (MQ=255)
                                                                                                              gCCGGGGCCGGCCTCTGCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTccc                                        <  2:5777983/150‑1 (MQ=255)
                                                                                                                ctgtgctggccTCTTCGCGGGTAAAACCGCTCC‑TACAAAGCGGCGGGGCCCGGGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAAAAAAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTccccc                                      >  2:199190/8‑150 (MQ=17)
                                                                                                                    gccggccTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCcccgccc                                  <  2:5979928/150‑1 (MQ=255)
                                                                                                                      cggccTCTTCGCGGGTAAAACCCCACC‑GACACAGGGCCGCCCCCCGTTGTAGGAGCGGGTTTAACCCCGGAGAGGCCAGCACACGCAATACAAAGCTTCAGGGCCGCGCAGCCACCCCGTGGTCGTCCCCCACCCGCGTCcccccccccg                                >  1:6281732/1‑148 (MQ=255)
                                                                                                                      cggccTCTGCGGGGGTAAACCCGCTCC‑TACACCGGGCGGCGCCGGTTTGTCGGTGGGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCgg                                <  2:3783547/150‑1 (MQ=38)
                                                                                                                          cgcgtCGCGGTCAAACCCCCCCC‑CACCACGGGCCGCGCCCTTTTGCCGGGGGGGGTTACCCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTc                            <  1:6645557/146‑1 (MQ=255)
                                                                                                                           tctTCGCGGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCGGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTcc                           >  2:6050888/1‑150 (MQ=21)
                                                                                                                             ttCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCGTTGTAGGAGCGGGTTTACCCGCGAAGTGGCCAGCACACGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTg                         >  2:3919842/1‑150 (MQ=255)
                                                                                                                               cgcgGGTAAACCCGCTCC‑TACACTGGGCCGCGCCGCTTTGTAGGCGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGAt                       <  1:4062046/150‑1 (MQ=255)
                                                                                                                               cgcgGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGAt                       >  2:7497620/1‑150 (MQ=255)
                                                                                                                               cgcgGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGAt                       >  2:2534999/1‑150 (MQ=255)
                                                                                                                                gggggTAACCCCCCCCCATACACCGGGCCGCGCCGCTTTGTCGGCGGGGTTTAACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGAt                       <  1:4575390/148‑1 (MQ=255)
                                                                                                                                gcgGGTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGa                        >  2:6779594/1‑148 (MQ=25)
                                                                                                                                  gggTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGcc                    >  2:5864962/1‑150 (MQ=255)
                                                                                                                                  gggTAAACCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCCGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGcc                    >  1:8077331/1‑150 (MQ=18)
                                                                                                                                        aCCCGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCa              >  1:5344545/1‑150 (MQ=25)
                                                                                                                                         cccGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCGGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAg             >  1:3638040/1‑150 (MQ=255)
                                                                                                                                         cccGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAg             >  1:2193590/1‑150 (MQ=255)
                                                                                                                                         cccGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAg             >  1:4833980/1‑150 (MQ=37)
                                                                                                                                         cccGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAg             >  1:8013723/1‑150 (MQ=37)
                                                                                                                                          ccGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCt                          >  2:7147802/1‑136 (MQ=255)
                                                                                                                                          ccGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCt                          <  1:7147802/136‑1 (MQ=255)
                                                                                                                                          ccGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAgg            >  2:7845887/1‑150 (MQ=255)
                                                                                                                                          ccGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAgg            >  1:2652178/1‑150 (MQ=255)
                                                                                                                                          ccGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAgg            >  1:4974388/1‑150 (MQ=37)
                                                                                                                                          ccGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAgg            >  1:1759276/1‑150 (MQ=37)
                                                                                                                                          ccGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAgg            >  2:652456/1‑150 (MQ=37)
                                                                                                                                           cGCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAggg           >  2:2493718/1‑150 (MQ=37)
                                                                                                                                            gCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGc          >  1:1918145/1‑150 (MQ=255)
                                                                                                                                            gCTCC‑TACAACGGGGCTCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCATCACAGTCAATACAAAGCTTCAGGGCCGCTCAGCCTCCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTTATGCCACTGCAGGGc          <  2:5542223/150‑1 (MQ=38)
                                                                                                                                            gCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCt                          <  2:2798542/134‑1 (MQ=25)
                                                                                                                                            gCTCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGc          >  2:5182801/1‑150 (MQ=37)
                                                                                                                                              tCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCga        >  1:7801543/1‑150 (MQ=255)
                                                                                                                                              tCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCga        >  2:479676/1‑150 (MQ=255)
                                                                                                                                              tCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCga        >  2:739351/1‑150 (MQ=255)
                                                                                                                                              tCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCCGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCga        >  1:384360/1‑150 (MQ=21)
                                                                                                                                              tCC‑TACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGTTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCga        >  2:3857709/1‑150 (MQ=37)
                                                                                                                                              tCC‑TACAAAGAGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCAGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCga        >  1:5827611/1‑150 (MQ=37)
                                                                                                                                                c‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCgatc      >  2:5104049/1‑150 (MQ=255)
                                                                                                                                                  tACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCgatca     >  2:3484144/1‑150 (MQ=255)
                                                                                                                                                  tACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCgatca     >  1:241260/1‑150 (MQ=255)
                                                                                                                                                  tACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCgatca     >  1:6316597/1‑150 (MQ=255)
                                                                                                                                                  tACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCgatca     >  1:8228881/1‑150 (MQ=255)
                                                                                                                                                  tACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCgatca     >  2:3610602/1‑150 (MQ=37)
                                                                                                                                                  tACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCgatca     >  2:1682725/1‑150 (MQ=37)
                                                                                                                                                  tACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCgatca     >  2:4500107/1‑150 (MQ=37)
                                                                                                                                                  tACAAAGCGGCGCGGCCCTGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCgatca     >  2:8219098/1‑150 (MQ=37)
                                                                                                                                                    cacaGGCCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCgatcagg   <  2:4212592/150‑1 (MQ=255)
                                                                                                                                                     acaGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCgatcagga  >  2:7362730/1‑150 (MQ=255)
                                                                                                                                                     acaGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCgatcagga  >  2:142674/1‑150 (MQ=255)
                                                                                                                                                     acaGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGCGCgatcagga  >  1:6149511/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
CTGCATTTTGCCCTGGCGGCGGGGGTGGCGGGGGCGTTGGCGCTGTGGCCGCTGTGGTTTGTGGTGGGTGGGCGGCCTGGGGAAGGGGCTGTAGCTCGATAATCGGTATTGCCGGGGCCGGCCTCTTCGCGGGTAAACCCGCTCC‑TACACAGGGCCGCGCCGCTTTGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGCACAGGCAATACAAAGCTTCAGGGCCGCTCAGCCACCGAGTGGTCGTCCGCCACCGGCGTCCCCCGCCCGGCTTCCTGATGCCACTGCAGGGCGATCAGGA  >  NC_002947/1544382‑1544679

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑