New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 695669 | 12 (0.720) | 4 (0.250) | 4/270 | 1.5 | 27.3% | coding (87/1494 nt) | mmsA‑I | methylmalonate‑semialdehyde dehydrogenase |
? | NC_002947 | = 695687 | 10 (0.640) | coding (105/1494 nt) | mmsA‑I | methylmalonate‑semialdehyde dehydrogenase |
GCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/695546‑695669 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccagTTCGACCTTGCGAACGGCCTGGCCAGTGGACGGGTTGAAG < NC_002947/695687‑695648 GCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGTTCGACCTTGCGAACGGCCTGGCCAG < 2:7948/150‑1 TGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGTTCGACCTTGCGAACGGCCTGGCCAGTGGACGG < 2:306877/150‑1 TCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGTTCGACCTTGCGAACGGCCTGGCCAGTGGACGGGTTGAAG < 1:187541/104‑1 TCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAGTTCGACCTTGCGAACGGCCTGGCCAGTGGACGGGTTGAAG > 2:187541/1‑104 GCGCGCCTGGCTCTCCTTTGTTTATCTGGAGTTTTGCATGAGCATTGTTCAGCACCTGATTCACGGCGAACTGGTTACCAAGGGTGAGCGCACCGCCGATGTCTTCAACCCGTCCACTGGCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/695546‑695669 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggccagTTCGACCTTGCGAACGGCCTGGCCAGTGGACGGGTTGAAG < NC_002947/695687‑695648 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |