New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2057943 | 13 (0.780) | 4 (0.270) | 4/254 | 1.4 | 30.1% | intergenic (+27/‑116) | aroC/PP_1831 | chorismate synthase/membrane protein |
? | NC_002947 | = 2058017 | 7 (0.470) | intergenic (+101/‑42) | aroC/PP_1831 | chorismate synthase/membrane protein |
CCCGTGCGTGGGCATCCGTGCCACGCCGATTGCCGAGGCGATGATGGCCATTGCGTTGATGGACCACCTGCTGCGCCACCGTGCGCAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2057784‑2057943 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctcttcgcgggtGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCGGGTTTACCCGCGAAGAGGCCGTTGCAGTTGGATCAGCGCTGGCCCAGCACCGGGGTATTCACTTGCAC < NC_002947/2058017‑2057881 CCCGTGCGTGGGCATCCGTGCCACGCCGATTGCCGAGGCGTTGATGGCCATTGCGTTGATGGACCACCTGCTGCGCCACCGTGCGCAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCT < 2:5657/150‑1 GTGGGCATCCGTGCCACGCCGATTGCCGAGGCGATGATGGCCATTGCGTTGATGGACCACCTGCTGCGCCACCGTGCGCAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTC < 1:118113/144‑1 GTGGGCATCCGTGCCACGCCGATTGCCGAGGCGATGATGGCCATTGCGTTGATGGACCACCTGCTGCGCCACCGTGCGCAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTC > 2:118113/1‑144 CCACCGTGCGCAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGG > 2:246326/1‑150 CAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCGGGTTTA < 1:246326/150‑1 CCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCGGGTTTACCCGC > 1:151574/1‑128 CCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGTGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCGGGTTTACCCGC < 2:151574/128‑1 CCTCTTCGCGGGTGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCGGGTTTACCCGCGAAGAGGCCGTTGCAGTTGGATCAGCGCTGGCCCAGCACCGGGGTATTCACTTGCAC > 2:92250/1‑150 CCCGTGCGTGGGCATCCGTGCCACGCCGATTGCCGAGGCGATGATGGCCATTGCGTTGATGGACCACCTGCTGCGCCACCGTGCGCAGAATGCCGATGTGCAAGTGAATACCCCGGTGCTGGGCCAGCGCTGATCCAACTGCAACGGCCTCTTCGCGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2057784‑2057943 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcctcttcgcgggtGAACCCGCTCCTACGCGGATTTCACCCTGTCACTGCACCTGAGGGCAGTGATATCCCAATGTAGGAGCGGGTTTACCCGCGAAGAGGCCGTTGCAGTTGGATCAGCGCTGGCCCAGCACCGGGGTATTCACTTGCAC < NC_002947/2058017‑2057881 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |