New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2564260 =	31 (1.860)	4 (0.250)	4/272	1.5	12.6%	coding (33/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase
	?	NC_002947	2564308 =	26 (1.640)					coding (81/1137 nt)	dauA	FAD‑dependent catabolic D‑arginine dehydrogenase
Rejected: Frequency below/above cutoff threshold.

GCTGCTGGCCGGCCAGGCGGTAGCCCAGCGAGGCGCCGGCGATGCCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2564309‑2564260 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcaGCGTGTGCTGCTGGTCGAGCGTGAATCGCAGCCTGGCTACCATTCCACCGGGCGTTCGGCGGCCATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTG  >  NC_002947/2564308‑2564413                                                                                                                                                              GCTGCTGGCCGGCCAGGCGGTAGCCCAGCGAGGCGCCGGCGATGCCAGCAGCGTGTGCTGCTGGTCGAGCGTGAATCGCAGCCTGGCTACCATTCCACCGGGCGTTCGGCGGCCATGTTCATGGAGGCTTACGGCACCCCACAGATCCAG        >  1:242437/1‑150       GGCCGGCCAGGCGGTAGCCCAGCGAGGCGCCTGGCCGGCCAGCAGCGTGTGCTGCTGGTCGAGCGTGAATCGCAGCCTGGCTACCATTCCACCGGGCGTTCGGCGGCCATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTG  >  2:151991/1‑150        GCCGGCCAGGCGGTAGCCCAGCGAGGCGCCGGCGATGCCAGCAGCGTGTGCTGCTGGTCGAGCGTGAATCGCAGCCTGGCTACCATTCCACCGGGCGTTCGGCGGCCATGTTCATGGAGACTTACGGCACCCCACAGATCCA         >  1:333265/1‑142        GCCGGCCAGGCGGTAGCCCAGCGAGGCGCCGGCGATGCCAGCAGCGTGTGCTGCTGGTCGAGCGTGAATCGCAGCCTGGCTACCATTCCACCGGGCGTTCGGCGGCCATGTTCATGGAGACTTACGGCACCCCACAGATCCA         <  2:333265/142‑1                                                                                                                                                              GCTGCTGGCCGGCCAGGCGGTAGCCCAGCGAGGCGCCGGCGATGCCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2564309‑2564260 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcaGCGTGTGCTGCTGGTCGAGCGTGAATCGCAGCCTGGCTACCATTCCACCGGGCGTTCGGCGGCCATGTTCATGGAGGCTTACGGCACCCCACAGATCCAGGCACTG  >  NC_002947/2564308‑2564413

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.