New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2685412 | 9 (0.540) | 3 (0.190) | 3/272 | 1.8 | 24.4% | coding (1118/1128 nt) | PP_2352 | hypothetical protein |
? | NC_002947 | = 2685422 | 10 (0.630) | coding (1108/1128 nt) | PP_2352 | hypothetical protein |
GGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2685265‑2685412 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggcaaCTGCACCAGATTGCCC < NC_002947/2685422‑2685407 GGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCcaat < 2:385033/150‑5 GGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAACTGCACCAGATTGCCC < 2:5341/150‑1 AGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAACTGCACCAGATTGCC < 1:168097/68‑1 AGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAACTGCACCAGATTGCC > 2:168097/1‑68 GGCAGATTTGCCCAGGGCGGGTTGATGGTTTGACCTCGATGGCCCTTTCGCGGGCGGCACGCGCATCGGTGGTTCGGCAGAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAAGGGCCATCTCAGGCACTGCAGGCTCAGGGGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2685265‑2685412 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggcaaCTGCACCAGATTGCCC < NC_002947/2685422‑2685407 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |