New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2973193 | 12 (0.720) | 3 (0.190) | 3/272 | 1.8 | 21.1% | coding (1567/2391 nt) | PP_2599 | chemotaxis sensory transducer family protein |
? | NC_002947 | = 2973206 | 11 (0.690) | coding (1580/2391 nt) | PP_2599 | chemotaxis sensory transducer family protein |
GTGGACAAGGCGACCAAGCTGGAGACCCTGTACAACCGCATCCACGAAGTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2973043‑2973193 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcagcTCGGCCTGGCTTCGCTGCAGTGC < NC_002947/2973206‑2973184 GTGGACAAGGCGACCAAGCTGGAGACCCTGTACAACCGCATCCACGAAGTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAG > 1:226441/1‑150 GAGACCCTGTACAACCGCATCCACGAAGTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCTCGGCCTGGCTTCGCTGCAG < 2:114848/150‑1 CAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCTCGGCCTGGCTTCGCTGCAGTGC > 1:37754/1‑64 CAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGCTCGGCCTGGCTTCGCTGCAGTGC < 2:37754/64‑1 GTGGACAAGGCGACCAAGCTGGAGACCCTGTACAACCGCATCCACGAAGTACGCATGCGTTTCGAAGTGCTGTGGCGCGATGCGGAGCTGGCTTATTGGCAAGGCCTGGCCAGCGGCGTCGACCAGCAGGTACTGAAAGCCGCACTGCAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2973043‑2973193 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcagcTCGGCCTGGCTTCGCTGCAGTGC < NC_002947/2973206‑2973184 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |