New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 6174998 = | 7 (0.420) | 3 (0.180) | 3/284 | 1.9 | 27.3% | coding (62/777 nt) | PP_5410 | DeoR family transcriptional regulator |
? | NC_002947 | 6175017 = | 9 (0.540) | coding (43/777 nt) | PP_5410 | DeoR family transcriptional regulator |
TCCACAGGTCAGCGACAGCTTGACGAATCGCGCGTCTTAGGTTTTGATTGCAACCATTAACTTTCGAATCGAAACTTAAACGCACATGTCGAAACGAAACACACCACAACGGCGACACAATATTCTGGCTCTGCTCAGCGAGCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6175144‑6174998 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCCAGAATATTGTGTC > NC_002947/6175017‑6175031 TCCACAGGTCAGCGACAGCTTGACGAATCGCGCGTCTTAGGTTTTGATTGCAACCATTAACTTTCGAATCGAAACTTAAACGCACATGTCGAAACGAAACACACCACAACGGCGACACAATATTCTGGCTCTGCTCAGCGAGCAGGGCCA < 2:86152/150‑1 TTGATTGCAACCATTAACTTTCGAATCGAAACTTAAACGCACATGTCGAAACGAAACACACCACAACGGCGACACAATATTCTGGCCCTGCTCGCTGAGCAGAGCCAGAATATTGTGTC > 1:79353/1‑119 TTGATTGCAACCATTAACTTTCGAATCGAAACTTAAACGCACATGTCGAAACGAAACACACCACAACGGCGACACAATATTCTGGCCCTGCTCGCTGAGCAGAGCCAGAATATTGTGTC < 2:79353/119‑1 TCCACAGGTCAGCGACAGCTTGACGAATCGCGCGTCTTAGGTTTTGATTGCAACCATTAACTTTCGAATCGAAACTTAAACGCACATGTCGAAACGAAACACACCACAACGGCGACACAATATTCTGGCTCTGCTCAGCGAGCAGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6175144‑6174998 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCCAGAATATTGTGTC > NC_002947/6175017‑6175031 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |