New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 732787 = | 1 (0.060) | 3 (0.190) | 3/274 | 1.8 | 75.4% | coding (2324/2565 nt) | clpB | chaperone protein ClpB |
? | NC_002947 | 732821 = | 1 (0.060) | coding (2358/2565 nt) | clpB | chaperone protein ClpB |
GAACTGGTGGGTGACCGCGAGGCACAGCGTGCGGCAGTGATGGATGCGGTGGGGGCGCACTTCCGTCCGGAATTCATCAACCGCATCGACGAAGTGGTGGTGTTCGAGCCTTTGGGCCGCGAGCAGATTGCCGGTATTACAGAAATCCAGCT‑‑CGGCCGCCTGCGCAGCCGCCTGCTGGAGCGCGAACTGTCGTTGAGCCTGAGCCCAGAGGCGTTGGACAAGCTGATTGCCGTGG > NC_002947/732642‑732876 | gccggccagaatcagctgcgccagcgggttctcgatccagcgctggatcgcacgcttcagcggccgcgcgccgtacaccgggtcataacccacggcaatcagcttgtccaacgcctctgggctcaggctcaacgacagttcgcgcTCCAg < 2:327809‑M1/5‑1 (MQ=255) tctcgatccagcgctggatcgcacgcttcagcggccgcgcgccgtacaccgggtcataacccacggcaatcagcttgtccaacgcctctgggctcaggctcaacgacagttcgcgcTCCAGCAGGCGGCCGCCTGCGCAGCCGCctgctg > 1:327809‑M1/117‑150 (MQ=255) gccgtacaccgggtcataacccacggcaatcagcttgtccaacgcctctgggctcaggctcaacgacagttcgcgcTCCAGCT‑‑CGGCCGCCTGCGCAGCCGCCTGCTGGAgcgc > 1:297111‑M1/77‑114 (MQ=255) gccgtacaccgggtcataacccacggcaatcagcttgtccaacgcctctgggctcaggctcaacgacagttcgcgcTCCAGCT‑‑CGGCCGCCTGCGCAGCCGCCTGCTGGAgcgc < 2:297111‑M1/38‑1 (MQ=255) tCGACGAAGTGGTGGTGTTCGAGCCTTTGGGCCGCGAGCAGATTGCCGGTATTACAGAAATCCAGCT‑‑CGGCCGCCTGCGCAGCCGCCTGCTGGAGCGCGAACTGTCGTTGAGCCTGAGCCCAGAGGCGTTGGACAAGCTGATTGCCGTgg < 2:266301/150‑1 (MQ=255) | GAACTGGTGGGTGACCGCGAGGCACAGCGTGCGGCAGTGATGGATGCGGTGGGGGCGCACTTCCGTCCGGAATTCATCAACCGCATCGACGAAGTGGTGGTGTTCGAGCCTTTGGGCCGCGAGCAGATTGCCGGTATTACAGAAATCCAGCT‑‑CGGCCGCCTGCGCAGCCGCCTGCTGGAGCGCGAACTGTCGTTGAGCCTGAGCCCAGAGGCGTTGGACAAGCTGATTGCCGTGG > NC_002947/732642‑732876 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |