New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1138537 =	16 (0.960)	3 (0.200)	3/258	1.7	19.1%	intergenic (‑62/+103)	arcC/arcB	carbamate kinase/ornithine carbamoyltransferase
	?	NC_002947	1138626 =	11 (0.730)					intergenic (‑151/+14)	arcC/arcB	carbamate kinase/ornithine carbamoyltransferase
Rejected: Frequency below/above cutoff threshold.

GCTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGAT  >  NC_002947/1138403‑1138669                                                                                                                                       |                                                                                                                                     gcTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCAt                                                                                                                       <  2:156588/150‑1 (MQ=255)               gTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGc                                                                                                         <  1:186114/150‑1 (MQ=255)               gTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGc                                                                                                         <  2:46450/150‑1 (MQ=255)                        tCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGa                                                                                                >  2:345425/1‑150 (MQ=255)                                    aGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCgatga                                                                                    >  1:264788/1‑150 (MQ=255)                                              tGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGAc                                                                          <  1:102366/150‑1 (MQ=255)                                                       aTGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTcgcg                                                                 <  2:64568/150‑1 (MQ=255)                                                                          gtgGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAg                                              >  2:241542/1‑150 (MQ=255)                                                                               acgatcaaggcgatcctggtatcgaccctggctgatctataagtagcccgcagtcgCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCTTCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACt                                         >  1:84084‑M1/57‑150 (MQ=255)                                                                                    cTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCggg                                    <  2:289172/150‑1 (MQ=255)                                                                                            tcctggtatcgaccctggctgatctataagtagcccgcagtccCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGcc                                                         >  2:235629‑M1/44‑121 (MQ=255)                                                                                            tcctggtatcgaccctggctgatctataagtagcccgcagtccCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGcc                                                         <  1:235629‑M1/78‑1 (MQ=255)                                                                                                 atgaatgGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACGTATAGATc                       >  2:296143/1‑150 (MQ=255)                                                                                                    aatgGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGc                    <  2:264788/150‑1 (MQ=255)                                                                                                         aCTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCgg                                                                               >  2:215809/1‑86 (MQ=255)                                                                                                         aCTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCgg                                                                               <  1:215809/86‑1 (MQ=255)                                                                                                             tCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGa           >  1:250899/1‑150 (MQ=255)                                                                                                                   cACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGCGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAg     <  2:17162/150‑1 (MQ=255)                                                                                                                      ggAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGAt  >  2:166444/1‑150 (MQ=255)                                                                                                                                       |                                                                                                                                     GCTGGTTGTCAGCGGTCATGGGCTCGCCGCGACGAAGCAGGGCGTTGCCGCCCAATGCAACAACGATACGCATGTGGAATGTCCTTTAGCGAAAGAATGAATGGACTGTCGCTGCACGGAAGCTGCGGAGTTCGCTGTGGGAGCGGGCATGCCCGCGAAGAGGCCAGACCTGACATCATCGATGATGCGGCTGACGCCTTCGCGGGCACGCCCGCTCCCACAGGGACTGCGGGCTACTTATAGATCAGCCAGGGTCGATACCAGGAT  >  NC_002947/1138403‑1138669

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.