New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1436025 = | 10 (0.600) | 4 (0.250) | 4/270 | 1.5 | 37.3% | intergenic (‑55/+98) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase |
? | NC_002947 | 1436102 = | 4 (0.250) | intergenic (‑132/+21) | PP_1256/PP_1257 | alpha‑ketoglutarate semialdehyde dehydrogenase/1‑pyrroline‑4‑hydroxy‑2‑carboxylate deaminase |
GTTGGGTCGATGGCACGGATGGCGTCGCGGCTGCCGGTTACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTG > NC_002947/1435891‑1436153 | gtTGGGTCGATGGCACGGATGGCGTCGCGGCTGCCGGTTACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCcg > 1:371824/1‑150 (MQ=255) ttGGGTCGATGGCACGGATGGCGTCGCGGCTGCCGGTTACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCcgc < 2:141996/150‑1 (MQ=255) gtGGGTCGATGGCACGGATGGCGTCGCGGCTGCCGGTTACCGGCCTCGGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAAGGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCcgc < 2:344264/149‑1 (MQ=255) aggATGGCGTCGCTGCTGCCGGTTACCGGCCTCTTGCCGATCAGCAGGTTGCCTTTGAGGTGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGTGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAg < 1:206304/149‑1 (MQ=255) tcagcgcaactatgccgaacagcagtacgcgctgttccgcagctggtatgccagctggtcggccgagcaaaacatcgcctgagcagccactgctctccctgtgGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCAt < 1:63355‑M1/41‑1 (MQ=255) tcagcgcaactatgccgaacagcagtacgcgctgttccgcagctggtatgccagctggtcggccgagcaaaacatcgcctgagcagccactgctctccctgtgGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCAt > 2:63355‑M1/104‑144 (MQ=255) gCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGc > 1:14801/1‑150 (MQ=255) cGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTACTGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCAc < 2:249220/150‑1 (MQ=255) cGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCAc < 2:249193/150‑1 (MQ=255) gggCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCACGCCCGCTCCCACAGGGAGAGCa < 2:14801/150‑1 (MQ=255) aaTGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCt < 2:124753/150‑1 (MQ=255) atcgcctgagcagccactgctctccctgtgGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCACGcc > 1:209996‑M1/31‑101 (MQ=255) atcgcctgagcagccactgctctccctgtgGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCACGcc < 2:209996‑M1/71‑1 (MQ=255) ggggggATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCACGCCCGCTCCCACAGGGAGAGCCGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTg > 2:210506/1‑150 (MQ=255) | GTTGGGTCGATGGCACGGATGGCGTCGCGGCTGCCGGTTACCGGCCTCTGGCCGATCAGCAGGTTGCCTGTGAGGGGCATGTAGCCTCCTTGGAAATCTAATGCAGATGCATGGGGGGGATTACGACCCCTGTAGGAGCGGGTTCACCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGGGTCGCCTGATTCGCGGGCACGCCCGCTCCCACAGGGAGAGCAGTGGCTGCTCAGGCGATGTTTTGCTCGGCCGACCAGCTG > NC_002947/1435891‑1436153 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |