New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2796887 | 11 (0.660) | 4 (0.260) | 4/260 | 1.4 | 25.0% | intergenic (+30/+82) | PP_2447/puuB | hypothetical protein/gamma‑glutamylputrescine oxidase |
? | NC_002947 | = 2796938 | 14 (0.920) | intergenic (+81/+31) | PP_2447/puuB | hypothetical protein/gamma‑glutamylputrescine oxidase |
CCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGC > NC_002947/2796753‑2797035 | ccGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAgg < 2:342370/150‑1 (MQ=255) ccGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAgc < 2:342376/150‑2 (MQ=255) ggtggtTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAgcccgcgcccacaggactgtgcaataagcacaaatcc < 2:125720‑M1/150‑38 (MQ=255) tgctgcGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGgcgc < 2:124302/150‑1 (MQ=255) gctgcGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAacctgcgcccacacggactgtgcaataagcacaaatcctgtgggcgcg < 2:23421‑M1/150‑49 (MQ=255) ggATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAacctgcgcccacacggactgtgcaataagcacaaatcctgtgggcgcgggctt < 1:344265‑M1/150‑54 (MQ=255) aTGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgc > 2:92581‑M2/1‑146 (MQ=255) tGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcga < 2:354035‑M2/150‑11 (MQ=255) cacggccgGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAgcccgcgcccacacggactgtgcaataagcacaaatcctgtgggcgcgggcttgccggcgaagaa < 1:58936‑M1/147‑66 (MQ=255) ttGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTTCCGGCGAAGAGGCCAGGCCTGCCTGAAt > 1:89960/1‑150 (MQ=255) ggcgAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGa > 1:119203/1‑150 (MQ=255) gTTGCCTGTGCCGGCTTCTTCGCCGGCCAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCa > 1:43057/1‑150 (MQ=255) ccTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGa < 2:119203/150‑1 (MQ=255) ccGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTAc < 2:223742/134‑1 (MQ=255) ccGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTAc > 1:223742/1‑134 (MQ=255) cGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCt > 2:282247/1‑150 (MQ=255) cGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCt > 2:282266/1‑150 (MQ=255) ttcttcGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCGGGCttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccgtg < 1:58936‑M2/150‑86 (MQ=255) tcGCCGGCAAacctgcgcccacacggactgtgcaataagcacaaatcctgtgggcgcgggcttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttggcca < 2:354035‑M1/150‑141 (MQ=255) gCAAacctgcgcccacacggactgtgcaataagcacaaatcctgtgggcgcgggcttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttggccaattcat > 2:92581‑M1/1‑4 (MQ=255) aaGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTttgccggcgaagaagccggcacaggcaacgctattcgttcaggctattgaccgcctgcttcgccgcaatctcttgcccggccttggccaattcatcc < 1:344265‑M2/150‑98 (MQ=255) | CCGGCCCAGGTTGATCGCCAGCGGTGGTTGCATGCTGCGGATGAATTGGCCAAGGCCGGGCAAGAGATTGCGGCGAAGCAGGCGGTCAATAGCCTGAACGAATAGCGTTGCCTGTGCCGGCTTCTTCGCCGGCAAGCCCGCGCCCACAGGATTTGTGCTTATTGCACAGTCCGTGTGGGCGCAGGTTTGCCGGCGAAGAGGCCAGGCCTGCCTGAATCAGAAGCCCAGGCGATCGCGCAGGCTGTAGTACCAGGCACCGATGGCGCTGAAGGGTACGCGCAGC > NC_002947/2796753‑2797035 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |