New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5639467 = | 10 (0.600) | 3 (0.190) | 3/274 | 1.8 | 21.8% | coding (28/1443 nt) | PP_4949 | TldD/PmbA family peptidase |
? | NC_002947 | 5639485 = | 12 (0.750) | coding (46/1443 nt) | PP_4949 | TldD/PmbA family peptidase |
AGTACCGGGCTGCCATAATGAGCTGGCATTGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCCTGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTCACCGTGCGG > NC_002947/5639327‑5639610 | tccacgccattgacccgcacggtgagcatggcaccctcatcctggctgaagaagggtggttcggcgacgttgcggcgaaccgaaagcgcctggtgcgactgtttcacatggcgcagggaaaacaactcggccgtactgcgCAGCGCTTtg > 2:197325‑M1/141‑150 (MQ=255) gAGCTGGCATTGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCCTGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGc > 1:341391/1‑150 (MQ=255) cTGGCATTGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCCTGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGa < 1:31381/150‑1 (MQ=255) gCATTGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCCTGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAgtt > 2:121290/1‑150 (MQ=255) tGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCCTGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGttt < 2:321/150‑1 (MQ=255) gCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACAGAGGCATCCGCATGTTCGATTCCAGCGCCCTGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGtttt < 1:227687/150‑1 (MQ=255) tCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCCTGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTcc > 1:288376/1‑150 (MQ=255) tGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCCTGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAgttgt < 1:218416/125‑1 (MQ=255) tGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCCTGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAgttgt > 2:218416/1‑125 (MQ=255) ttgcggcgaaccgaaagcgcctggtgcgactgtttcacatggcgcagggaaaacaactcggccgtactgcgCAGCGCTTTGCTGCGCTGCGCAGTACgg < 1:85993‑M1/28‑1 (MQ=255) ttgcggcgaaccgaaagcgcctggtgcgactgtttcacatggcgcagggaaaacaactcggccgtactgcgCAGCGCTTTGCTGCGCTGCGCAGTACgg > 2:85993‑M1/72‑99 (MQ=255) aGGCATCCGCATGTTCGATTCCAGCGCCCTGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAg > 2:69729/1‑150 (MQ=255) ctgcGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTCACCGTGCgg < 2:361876/150‑1 (MQ=255) | AGTACCGGGCTGCCATAATGAGCTGGCATTGCTCGAGGCACACGACGATACCTGCCTCGGCATGCAAGACGGGTGGTTCTAGGGGGAGCCACCGTGTACACGGAGGCATCCGCATGTTCGATTCCAGCGCCCTGCTGCGCCAGCGCTTTGCTGCGCTGCGCAGTACGGCCGAGTTGTTTTCCCTGCGCCATGTGAAACAGTCGCACCAGGCGCTTTCGGTTCGCCGCAACGTCGCCGAACCACCCTTCTTCAGCCAGGATGAGGGCGCCATGCTCACCGTGCGG > NC_002947/5639327‑5639610 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |